G57972 (mfn2,LOC107748965,LOC107710790,LOC107698839,LOC107678429,LOC107602467)


Basic Information

Item Value
gene id G57972
gene name mfn2,LOC107748965,LOC107710790,LOC107698839,LOC107678429,LOC107602467
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 41252811 ~ 41255439 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU78166
TGGTCGTTGTAACCCATGAGGGCACGGCGGGTATTCTTGGGTCCGAGGAATCGGTTGACCAGCATGGTCCAGCCAAGTGAGAAGTGGAAGTTGATGTCTTCCTGGAAGTCGCTGCACAGCTTGTCACAGTTAAGGTCATAGCTGAGACTGAAGCACTGTCTGGGCACCATCTTATCCACTTGTTCTCTCACAGAAAGGGGAAGCAAGGGCTTCAAACCATCTAtcatttctgtctgtgtgttctgAAGAGCACTTGTGATTGCATTGGAACACCTCTCAGACATGTTCCTTCCCAGGCCCTCCTCTATGTGCCTGTGCAGCTCATTCTTGTACACCTTCAGAACCACTTGTGAGGGATGGAAATCAAGGTGGAACTCGTCCACCAGCACATGAAGCCTCCTTATCTCTTCAGCCATTGCGTTTGACACCTGTTTCTCCACCTCCTCAGTGATTTTTCTGATCTTGCTCTTACAGTCCAGGGTGAGTAGGTCCAGCTGCTTATCAATGAAGTCCAGCCTGTCCTCCCGTTCCTCCTTTGTCTCCATGCAGTGTATCCTTTGCTCTTGGGCAGCCACGTGCACAGAATCCATAATCAGTCGAAGTGCTTCTGAAATCTGCTTGGCCCTAACAGTGTGCTGCTCAAACTTTGTCTTCACTGCTGATTGAGAT

Function

symbol description
mfn2 Predicted to enable GTPase activity. Acts upstream of or within several processes, including axonal transport of mitochondrion; axonogenesis; and neuromuscular junction development. Predicted to be located in mitochondrial outer membrane. Predicted to be integral component of membrane. Predicted to be intrinsic component of mitochondrial outer membrane. Is expressed in several structures, including heart; muscle; nervous system; otic vesicle; and ventral mesenchyme. Used to study Charcot-Marie-Tooth disease type 2. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease; Charcot-Marie-Tooth disease type 2A2A; Charcot-Marie-Tooth disease type 2A2B; and Charcot-Marie-Tooth disease type 6. Orthologous to human MFN2 (mitofusin 2).

NR:

description
PREDICTED: mitofusin-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78166 True 669 lncRNA 0.50 5 41252811 41255439

Neighbor

gene id symbol gene type direction distance location
wrap73 wrap73,LOC107678416,LOC107748967,LOC107710786,LOC107595759 coding upstream 504072 40720804 ~ 40748739 (+)
trnaw-cca_40 NA coding upstream 652749 40599991 ~ 40600062 (+)
LOC103023889 LOC108414619 coding upstream 699660 40543509 ~ 40553151 (+)
LOC103024512 mapkapk2,LOC108414051,LOC107683909,LOC107550950 coding upstream 721818 40512253 ~ 40530993 (+)
LOC111192734 LOC108414049 coding upstream 766237 40483010 ~ 40486574 (+)
kiaa2013 kiaa2013,si:dkeyp-104h9.5,LOC107678452,LOC107698843,LOC107595762,LOC107602448 coding downstream 49871 41305310 ~ 41315208 (+)
LOC103039684 LOC108432092,LOC107710771,LOC106926566,LOC107691064,LOC102306682 coding downstream 63286 41318725 ~ 41335582 (+)
nppa NA coding downstream 134180 41389619 ~ 41390496 (+)
LOC103032860 LOC103032860,LOC108432146 coding downstream 140702 41396141 ~ 41398105 (+)
mthfr mthfr,LOC107602465,LOC107687111,LOC107691055 coding downstream 185260 41440699 ~ 41452963 (+)
G57967 NA non-coding upstream 5270 41245137 ~ 41247541 (+)
G57965 NA non-coding upstream 14142 41238321 ~ 41238669 (+)
G57880 NA non-coding upstream 177435 41072386 ~ 41075376 (+)
G57860 NA non-coding upstream 489329 40762338 ~ 40763482 (+)
G57867 tprg1l non-coding upstream 499850 40752502 ~ 40752961 (+)
G57987 NA non-coding downstream 39145 41294584 ~ 41296674 (+)
G58054 NA non-coding downstream 322882 41578321 ~ 41579048 (+)
G58074 NA non-coding downstream 435682 41691121 ~ 41691388 (+)
G58096 NA non-coding downstream 502844 41758283 ~ 41763578 (+)
G58114 NA non-coding downstream 754607 42010046 ~ 42030054 (+)
G57856 tp73 other upstream 572256 40675040 ~ 40680555 (+)
LOC103039219 iqsec2,LOC107747221,LOC107683900,LOC107702804,LOC108265842 other upstream 1162540 39967090 ~ 40090271 (+)
G57664 NA other upstream 1206344 40044653 ~ 40046467 (+)
frmd3 frmd3,LOC107678471 other upstream 1882226 39292071 ~ 39370585 (+)
agtpbp1 agtpbp1 other upstream 2099335 39109244 ~ 39153476 (+)
LOC103032352 LOC103032352,LOC108432100 other downstream 119250 41374689 ~ 41377445 (+)
G58025 NA other downstream 182588 41438027 ~ 41438911 (+)
ndufa7 ndufa7 other downstream 780400 42035839 ~ 42053889 (+)
G58211 acot7 other downstream 953282 42208721 ~ 42281970 (+)
LOC103040535 arhgef16,ybx1,LOC107595774 other downstream 1279462 42534901 ~ 42576703 (+)

Expression


Co-expression Network