G58256 (ppih)


Basic Information

Item Value
gene id G58256
gene name ppih
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 42577192 ~ 42626114 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU78548
CTTAAGATGTCAGTTATTCATTGTTGGAAATGAATACAAACTGAAGataaattgatttttaaattgAGATTGAGACTTAAGTTggtgattaaaagtaaaagtaagaaaTCAAGTAAGTCATGAAATCAAACGTCTTtgtatttgtgaaaaaaaatcaaatgtaaaCAGACATGTAGATacagtaataacaataatgattaaaaaagaagagaaaaaaaaaaagatcacatcTCTCCACACTGAGCGATAACGATGGGTAGTTTTGGCTTGTTGTTGGGTCCTGTGGGCACATTctCAATTTTTCTCATGACAAGTAAACCATCGACCACTTTCCCAAATACTACATGCTTTCCATCTAACCAGTCACACTTTGTACAGGTGATGAAAAACTGGCAGCCATTTGTTCCTGGACCACTGTTTGCCATAGAAAGCAAGCCTGGGGCAGAATGCTTCATTTTGAAGTTCTCATCTGCAAACGGACCCCTGTAGATACTGCAAATCCCTGTGCCGTCTCCATTTACAAAATCTCCTCCTTGAATCATGAAGTCCTTAATCACcCTGTGAAATGTGCATCCTTTGTATCCAATAGGAACACCATCTTTCCTGAACTCCCCTGTGCAGAACTGCCTGAAGTTCTCTGCAGTCTTCGGAACAACATCGGCAAACAGCTCGACCTTCATTCTTCCAACTTCCTGCCCTCCGATCGTCACGTCGAAGAAGACGATGGGGTTGTTGGGGTTTGAGGGCTGAACGTTCATTCTGGAGTAAAACTGCAGGTTAAAAAAACTTAAGAACAGAAACTTCACTCTCCTTCACGCTAGCACAGGAACCCGTTTCAAACTGCTCCGCTACGGCAAGC

Function

symbol description
ppih Predicted to enable cyclosporin A binding activity and peptidyl-prolyl cis-trans isomerase activity. Acts upstream of or within angiogenesis. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Orthologous to human PPIH (peptidylprolyl isomerase H).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase H

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78548 True 859 TUCP 0.41 9 42577192 42626114

Neighbor

gene id symbol gene type direction distance location
espn espn coding upstream 44674 42431490 ~ 42532518 (+)
LOC103036755 NA coding upstream 499249 42076474 ~ 42077943 (+)
LOC103027595 NA coding upstream 509263 42062298 ~ 42067929 (+)
LOC103027292 NA coding upstream 517780 42042327 ~ 42059412 (+)
dpp9 dpp9 coding upstream 600144 41948019 ~ 41977048 (+)
angptl7 angptl7,LOC107727987,LOC107594962 coding downstream 137889 42764003 ~ 42767588 (+)
trnar-ucg_3 NA coding downstream 212724 42838838 ~ 42838910 (+)
ogg1 ogg1 coding downstream 236839 42862953 ~ 42873055 (+)
LOC103045241 NA coding downstream 289373 42915487 ~ 42947000 (+)
pcbp2 pcbp2,LOC107663584,LOC107569168,LOC106571954,LOC105026324 coding downstream 420365 43046479 ~ 43057716 (+)
LOC111192688 NA non-coding upstream 154379 42366132 ~ 42422813 (+)
G58227 NA non-coding upstream 170600 42406197 ~ 42406592 (+)
G58201 NA non-coding upstream 446158 42128190 ~ 42131034 (+)
G58177 NA non-coding upstream 526083 42050141 ~ 42051109 (+)
G58114 NA non-coding upstream 547138 42010046 ~ 42030054 (+)
G58267 exosc10,LOC107724196,LOC107696929 non-coding downstream 2507 42628621 ~ 42649533 (+)
G58444 NA non-coding downstream 544027 43170141 ~ 43172830 (+)
G58454 NA non-coding downstream 694642 43320756 ~ 43326039 (+)
G58460 NA non-coding downstream 720271 43346385 ~ 43349871 (+)
G58542 NA non-coding downstream 1082602 43708716 ~ 43708986 (+)
LOC103040535 arhgef16,ybx1,LOC107595774 other upstream 489 42534901 ~ 42576703 (+)
G58211 acot7 other upstream 295222 42208721 ~ 42281970 (+)
ndufa7 ndufa7 other upstream 523303 42035839 ~ 42053889 (+)
G58025 NA other upstream 1138281 41438027 ~ 41438911 (+)
LOC103032352 LOC103032352,LOC108432100 other upstream 1199747 41374689 ~ 41377445 (+)
G58529 NA other downstream 1034668 43660782 ~ 43661647 (+)
LOC111192736 NA other downstream 1809744 44435858 ~ 44446503 (+)
LOC103028384 ptges2,LOC107083974,LOC107081068 other downstream 1952966 44579080 ~ 44583918 (+)
G58696 snrnp200,LOC106579886,LOC106585548 other downstream 1969119 44595233 ~ 44600960 (+)
LOC103029434 dgcr6,LOC103029434,LOC108430318,LOC107572069,LOC107721026,LOC108265986,LOC105899531 other downstream 2226666 44852780 ~ 44866838 (+)

Expression


Co-expression Network