G58903


Basic Information

Item Value
gene id G58903
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 45193077 ~ 45235126 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU79388
acttcagtttctgaatcagtttctctgattttgctatttataggtttatgtttgagtaaaattaacattgttgttttattctataaactacagacaacatttctcccaaattccaaattcatttagagcatttatttgcagaaaatgagaaatggctgaaataacaaaaaagatgcagaactttcagacctcaaataatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79388 True 201 lncRNA 0.29 2 45193077 45235126

Neighbor

gene id symbol gene type direction distance location
LOC111192718 NA coding upstream 353881 44838429 ~ 44839196 (+)
dtx1 dtx1,LOC107692206,LOC107671029 coding upstream 500727 44635726 ~ 44692350 (+)
LOC103027865 NA coding upstream 625566 44555413 ~ 44567511 (+)
LOC103027244 NA coding upstream 652095 44535869 ~ 44540982 (+)
LOC103030075 NA coding upstream 663625 44448432 ~ 44529452 (+)
LOC103029982 NA coding downstream 268965 45504091 ~ 45521326 (+)
creld1 creld1 coding downstream 286647 45521773 ~ 45534629 (+)
ift122 ift122 coding downstream 313016 45548142 ~ 45606522 (+)
rho rho,exorh,LOC107698434,LOC107747750,LOC107758318 coding downstream 372615 45607741 ~ 45613573 (+)
trh NA coding downstream 705742 45940868 ~ 45943458 (+)
G58895 NA non-coding upstream 20615 45172178 ~ 45172462 (+)
G58863 NA non-coding upstream 176971 45015742 ~ 45016106 (+)
G58860 NA non-coding upstream 195991 44996636 ~ 44997086 (+)
G58837 NA non-coding upstream 238437 44953950 ~ 44954640 (+)
G58830 NA non-coding upstream 275010 44917557 ~ 44918067 (+)
G58945 NA non-coding downstream 305456 45540582 ~ 45545478 (+)
G58962 tmcc1,LOC108436190 non-coding downstream 506920 45742046 ~ 45744398 (+)
G58965 tmcc1 non-coding downstream 514985 45750111 ~ 45754109 (+)
G58972 NA non-coding downstream 560610 45795736 ~ 45795993 (+)
G58974 NA non-coding downstream 563419 45798545 ~ 45799040 (+)
LOC103029434 dgcr6,LOC103029434,LOC108430318,LOC107572069,LOC107721026,LOC108265986,LOC105899531 other upstream 326239 44852780 ~ 44866838 (+)
G58696 snrnp200,LOC106579886,LOC106585548 other upstream 592117 44595233 ~ 44600960 (+)
LOC103028384 ptges2,LOC107083974,LOC107081068 other upstream 609159 44579080 ~ 44583918 (+)
LOC111192736 NA other upstream 746574 44435858 ~ 44446503 (+)
G58529 NA other upstream 1531430 43660782 ~ 43661647 (+)
G58971 NA other downstream 554585 45789711 ~ 45790154 (+)
G59257 cdk11a,LOC108265382 other downstream 1617238 46852364 ~ 46881891 (+)
gnb1 gnb1,gnb1a,LOC103044197,LOC104956353,LOC107666091,LOC107595416,LOC107385217 other downstream 2388428 47623554 ~ 47661357 (+)
G59782 NA other downstream 3635041 48870167 ~ 48879623 (+)
G59806 NA other downstream 3763034 48998160 ~ 48998471 (+)

Expression


Co-expression Network