G58971


Basic Information

Item Value
gene id G58971
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 45789711 ~ 45790154 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU79487
gtaactggaactgccttagcatggtttaaatcatacttaaccgatcgctatcagtttgtgaggttaaatgatatgtcttccagttataccaaggtaagatatggaattccacaaggctctatattaggaccgttattatttacattatatatgctcccactgggcaaagttattataaaacatgacgtaaattttcattgttatgcagatgacacgcagctcttcatatcagccaaacctgatgacagagtgagattaaagaaaatcgaggattgtgtaaaagatgtgaaattgtggatgtcgcacaacttcctcctattaaatagtgataaaacagaagttctcctattaggccccaaagctgctagaaataaattatcagacttaatgctaaatctggccgacttctcagtcacacctggttcagcagctaaaaaccttgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79487 True 444 TUCP 0.37 1 45789711 45790154

Neighbor

gene id symbol gene type direction distance location
rho rho,exorh,LOC107698434,LOC107747750,LOC107758318 coding upstream 176138 45607741 ~ 45613573 (+)
ift122 ift122 coding upstream 183189 45548142 ~ 45606522 (+)
creld1 creld1 coding upstream 255082 45521773 ~ 45534629 (+)
LOC103029982 NA coding upstream 268385 45504091 ~ 45521326 (+)
LOC111192718 NA coding upstream 950515 44838429 ~ 44839196 (+)
trh NA coding downstream 150714 45940868 ~ 45943458 (+)
rbsn rbsn coding downstream 202904 45993058 ~ 46013668 (+)
LOC103044102 LOC108432094 coding downstream 267320 46057474 ~ 46070282 (+)
LOC111192690 LOC108432118 coding downstream 332707 46122861 ~ 46186900 (+)
LOC111192738 ninj1,LOC100690894,LOC106565158 coding downstream 615600 46405754 ~ 46423234 (+)
G58965 tmcc1 non-coding upstream 35602 45750111 ~ 45754109 (+)
G58962 tmcc1,LOC108436190 non-coding upstream 45313 45742046 ~ 45744398 (+)
G58945 NA non-coding upstream 244233 45540582 ~ 45545478 (+)
G58903 NA non-coding upstream 554585 45193077 ~ 45235126 (+)
G58895 NA non-coding upstream 617249 45172178 ~ 45172462 (+)
G58972 NA non-coding downstream 5582 45795736 ~ 45795993 (+)
G58974 NA non-coding downstream 8391 45798545 ~ 45799040 (+)
G59065 NA non-coding downstream 12217 45802371 ~ 45803103 (+)
G59067 NA non-coding downstream 14335 45804489 ~ 45822836 (+)
G59079 NA non-coding downstream 43684 45833838 ~ 45834105 (+)
LOC103029434 dgcr6,LOC103029434,LOC108430318,LOC107572069,LOC107721026,LOC108265986,LOC105899531 other upstream 922873 44852780 ~ 44866838 (+)
G58696 snrnp200,LOC106579886,LOC106585548 other upstream 1188751 44595233 ~ 44600960 (+)
LOC103028384 ptges2,LOC107083974,LOC107081068 other upstream 1205793 44579080 ~ 44583918 (+)
LOC111192736 NA other upstream 1343208 44435858 ~ 44446503 (+)
G58529 NA other upstream 2128064 43660782 ~ 43661647 (+)
G59257 cdk11a,LOC108265382 other downstream 1062210 46852364 ~ 46881891 (+)
gnb1 gnb1,gnb1a,LOC103044197,LOC104956353,LOC107666091,LOC107595416,LOC107385217 other downstream 1833400 47623554 ~ 47661357 (+)
G59782 NA other downstream 3080013 48870167 ~ 48879623 (+)
G59806 NA other downstream 3208006 48998160 ~ 48998471 (+)
lhx4 lhx4,LOC108412864,LOC107665078,LOC107755297,LOC107599001,LOC107699337,LOC107550233,LOC107758007 other downstream 3532124 49322278 ~ 49370251 (+)

Expression


Co-expression Network