G59782


Basic Information

Item Value
gene id G59782
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 48870167 ~ 48879623 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU80591
aacacTTGAATTATATGCTTCTATTAAAAGCATAAACAGAGcatttaaagttaataaaacacttaatgTGTTAACCAAAACTTCTGGAACTAAATGCttatatttaaagcatataaaaggcatttttagtaattaaaatacagttaatattttactcaaaacattTGAGTTGCATGCTTAAAGCATGTAGAGACCATGTAACCCACTAATACAGACCAGATAAACTAGAGTTTCAAgcttaaactgaactgaacttcagcagaacttttaaacacatttagtgctatttttatgaaacaaataaaacatataaagctCTTCATAATTAAGCACTAGGATGCCCTATAAGCGGACAATGCTCACCTAGCAGGAGAATCAGTAAACACGAGTTAATAATATGACGGCAGCTGGAGCTAGCTGCAGCTATCagacctctctctcccttcgcGCCTAATCGTCTGAGCCTCGTGCTCTCCTGCCTATGCATTCCTATGGGAGCTGCGTGATTTTGCCGTAAAGCAGACAGAACTGACataaagtgtgtagtgtgtgtgaaaACTGCTGCGGTTTTCTTAAAGGGGCAGCGCTTAATTAAGGGGCAACCTTACATTAAATGTCTAGAAAACAGCTGGGTTACATCCTCCCCTGCTTAAAATATGACGTCCTCGTCATGCACAGTAGCTGTAGCCTGTATCAATGCTGCAATCTGCTCCTGCAAAGACATTAAGAAACTATAGAGCAGTTGAGGTGAGCTAACATTATGCTGTCTGCAACCAACTTGAGAGCCAACATGGTAATCCCTAAGATAAGAAGGGGGTTGACGTCTTCTCTGTGGTCTACTTTGTACTAGTCTTGGGCTTGCCACAATTTCACTGTCAGACAACTCAGTAGAGTCGACTGCAAAGTCTGGAGCTTCTGGATTCAAAGAGCTCTGGAATGGAGATAAAGTCTGTTCAGCTGGCTGACTACTGTCTAGTTCTTCAGACTGCATGCAAGGTACGTCAATGTCCTCTCTTGCTTCGGAAGTTTGTGAAGATTCAAGCATCACTTCTTCACAGCTTGTAGGGACTTGAGCTGGTGTTTCACACACTTGACTTTCTCTAACAGCTTCCAAATCTACAGGTAAAAACCCACATGGGAGCAGCAAGTCGCGATGAAGGACACGTTCTCTGCCTTCTCCGTCTTCTGTTCTCACCACATACACTGGTATGTTTTCATCAGGCTGCTTGATTACAATGTGAACAGCAGATTCCCACCGATCAGAaattttgtgtttctttctAAGGCTAAGATTCCTAACAAGAACTCTGTCGCCCACTTCCAGAGGCATGGCGGTCACATTGGCATCCCAGCGTCTCTTGTTAAGTGCCTGTCTTTTCTCAGCATTTTGTGATGCAAGGTTATACGCATGTCTGAGTCTGCTCTTCAACTCGCGCACATACTGGGAGTGTGTCTTGGGATTATGGCCTCGAGGACTAATGCCGAAGTAAAGATCTATTGGGAGGCGTGGCTGCCGACCAAACATGAGAAGAAAAGGTGCTTCACCGGTCGTATCATTTCTCGTGCAGTTATAAGCATGTACGAGGGGTCGAACGTATTTTCTCCAgtcctctttcttcttttcctccAGTGTTCCCAACAAATCAAGAAGAGTTCTGTTGAATCTCTCAACAGGATTTCCTCTGGGATGATATGGCGTGGTCCGAGACTTGATCCCAGACAGCGTACACAGCTCTGTTACTACTTCAGACTCAAAACAAGCTCCTTGATCGCTATGCAATCTACGGGGAAAACCATAGTGGCTAATGAAATTTTCCCACAGCACTTTAGCTACGGTTCTTGCAGTCTGATCTTTGGTAGGGTAAGCTTGTGAGTATTTTGTAAAGAAGTCTGTTATGACTAAAATATTACGAGTGTCTCCTGAATCAGGTTCTAAGCTCAGAAAGTCCATACAAACAAGCTCAAGTGGGGCAGTAACTTTTATGTTAACGAGCTTGGCTGCCTTCTGGGCTCTGGCCTTCCTCCTTACACACCTCTCACAAGCTTTACATTTAGCTTCAATGTACTGAGCCATTTTAGGCCAGTAAAATCTAGCTCTTGCAAGTTCTACTGTTCTCTCTATACCCATGTGGCCTGTTTCACTGTGGACACCATGAAATGCTTGCTCTCTGTGGCTGCTTGGTAAGACCAACTGATGGAAAGCCTCACCACTCTGATCAAAGACTTTGCGATGCAACACTCCATCCAGTAATACTAGTTTGGACTTTTCCCTTAGCAGAAGCACTGTCTCAGGCTCCCTTTCTCTCACATGTACATCCTCTTTGCCAGTGTTGCCTTCTAAAATGTCAATGATGTAGGCCAAGTTACGGTCTTTTCTCTGCAGTTGGTGCCAGTCTTCCATAGACATCCCTGGAATGGTTTCTTGACCTGGCCACAGGGCTGGATCTTCCAGATCATCGGGTACAGCTCCTTCACCACATAATAGAGTTTCTACTGCTGGGATTCCACTCTTGTCAGACTCACACATCTCTTGAGAAACGCTGTGATACGTGCACAGAGTACTCACTGCCTCTTCGTCTAGAATGCTGAAGTTGTCAGTGCATGGGCTTGCACAATTTAACAAACGGCATACATTCTCTCTCAGCTCCTCCGACTCCTCATCCTCTGATGGTTGTCCACAAGGCCTCCGAGAAAGTCCATCAGCATCAGCGTTACGCAGACCAGATCTGTAATGTATGTCAAAATTGTAGATTGACAGTGCAGCAAGCCACCTATGGCTAGTGGCATCTAGCTTTGCGCTGGTCAAGACATAAGTCAGTGGGTTGTTGTCTGTCAGCACCTTGAATTCAGACCCATACAAATAGTCATGGAATTTCTCGCTCACGGCCCACTTAAGAGCGAGAAATTCTAATTTGTGGGCTGGGTAGTTTCTCTCACTTCTGGAAAGCCCTCGACTGGCATACGCTACTACCCTTGTTTCACCGTCTTGAACCTGATACAAAACTGCACCTAATCCAGTGGTGCTCGCGTCTGTGTGCAGCACATAGGGGAGGTGCCAGTCTGCAAAGCCAAGAATGGGTGCTGAGGTCAGTTTATCAACGATCAATTCAAAAGCTTCCTGACAGCTATCAGCCCATTTGTCTCTCAGTAAAGGTGACTTAGCTCGTGGCCCATAATGAGGACGCTTGTGTCTGGAGGCATATTCTCCTTTTAATAAATCATTGAGAGGTCGGACTATTTTGGCATAATCGCGAACAAATCGGCGATAATATCCAGTGAATCCGAGAAAGGACCTGAGCTCACGAACTGTCTGTGGGCAAGGCCATGTTTTAATAGCCGCAACTTTATCGGGATCAGGCTGAATCCCCTGTGCAGAAATGACATGTCCTAGATACCTCACAGATGTTTGAAAAAATTTGCATTTGGAGGGGGATAGTTTGAGGCCGAAATCAGAAATGCGTTTTAGCACTTTCATCACCCTTTCCTCGTGCTCCTCcaatgtgctggagaagatgatAAGATCGTCAAGAAAAGTGATAACTTCCTGAAGGTTCATTCCTTCCATTACTTTCTCCATTGTGCGTTGAAATGTGGCTGGGGAGTTCGTCAGACCTTGTGGTAGCCTCCGGAATTGCCATGTACCAAACGGGGTTGTAAAGGCTGTTTTTGGTCGGTCAGAGGGCTCAACTTCGAGCTGATAAAATCCACTTTTAAGGTCCAGAACACTGAACCATTTCGAGCCTGACAGTAAGGTGAATGTCTCCTCTATACGTGGTAGAGGATATGCATCTTTCTTGGTGAGATTATTTAGCTTCCTGTAATCTACTACCATTCTCAGTTCTCCACTTTTCTTTCTAACAAGCACAATGGGAGATGCATACGGACTGTTTGATTCTTCAATGATGCCTGCTGCTAAAAGATCTTGCAAATGCTTTTTCAGATCATTAAAGTCAGCTGGAGAGACACGTCTTGTTCTTTCTTTAAATGGCACATGTGGCTCTAGCTCTATGTGATGCCGGACACCGGAGGCTGTGCCAACATCCAGATCACTCCTGGAAAAGGCTTGTGGAACTTCTTTCAGGATCCTGGTTTGTATTTGCTGTTTAAGCTGTGGACTTAGAGGGCTGTTATTAAAATCTAACTCCAGAGGCTCATGGACAGGAGCAGTTTTCTCGGTTTGAGAGATCAACAGAGAATGAGTCTGTAGCTTAGAAGTCTCGTGAGAATTTGCTGAGGTATTTGCAGTAATAGGAACAGCCCAATCAATGGGTGAACAAGATGCAATCACAGTTTTAGGAGACAGAGTAATGTCGTGCTGAGAGACATTTTCCACAAAGAACTCAACCTGGCCGTGAGAATTAGGTTTCATGTCAACTATTTGGTCATAGACTATGAGACCTCCAGGTGTGTGAATTTCATCTGAGCTACTGACAAGAGCTTGAACCATTTCACAATTAGAGTTACAGGGACACATGCCTTTCAACAGACTCACTTCACCTTGTTTCACATGGACTGGCTCTTTACTACTAAGCATTATGCGCAGAACATTAGCACTCTCTGCACTAGGCTTTGACTTTTCACGATAGTCTGCATAGGCCATGGCCCAGCTGGTCTGAATAGGTAAGGTCTTGAGAAACTGAGTTCCACTTTCTTTTATGCAGCGCGTGGTTAACTGGCGCAAAACATTAGTGCCAACAAGCAGAGGGAATTTCTCATTATATGACTGGTCCGGACTCACTAGCACTAGGGTGTTGAAGCGCTGACCTGTGCCACATGCATTCTGTGGGAACCGAAACTCTACTTCAATGTACCCTAAATAGGGGACTCTTTGTCCAGCTGCACCTTCAATATTTAGTACACTGCCTATCGAGTACAGTTCACGATGGGCTAGATGTTGGGAATAAAATGACTGGCATGCAATTGTTACTTGTGAGCCAGAGTCTATTAAACAGTGGCACTGCACACCATCTATCCAAGCAACACTTTCACAAACATCACCAACAAGACCCTCAGGAATCTGAGTAGATGCTTCCTTAGTTGGGGACAGTCCATACATGCAGTAGCTCTCGGAACTAGTTTGAATTTTAGCTCCTGCTCGTTCCGCAGCAGGAGCTCTTACATGTTTAAAGGCAGAGGATGCTCGGGAGCTTGCTGGTGGCTTTGTCTACTACGATGCCTTTCACACAGCTTGCTTTGCACTAGGACAGCGTTAGTTGAATTTGTACACTGAGGTAGTAGATGAGAATTCTCCCCGCAGTTGTAGCAGAATCTCCCAACATTGGCTTCTCTTGCTGCAGAAACAACTAGATCAGCTTTAAGGCTTTTAGCATTTTGTGAGGTCTTGTAATTGGCTTTATCATTTCTGGCATGCTGAAATTTTGGTGCAGATGCATTTCTTTTAATCTCAGCTTCCAGCTGTCTGATTCTCTCCTCTAACTGTGCTCTTGTACAGGCATCAAGCGCATAGTTGTCACAGCTGGAGCCCTTGGGCTCGTCAGGAGTCATGTGAGTTTTGGTATGGACTTTGGTTGACGTTACTCCTAAATGTCtttttcttctcatttcttTGAGATGACTTTCTTTCTCATAAGTTCTGATCCTGAGTAGCATCTCAGAAAAAGTGGGAATGCTCTTTGAGGGATCAGCTAGTAAATCTTTCAAGTGAAGAGTGGATATTAACTGGTCATCCCAACAGCCACGCAGAAACTGCTTTAACAACTGAGAGTCAGCATCACCTCTGGATACACCATTTCTCTCTATGACTTCTTGTAGCAAGGTTTGAAGACGGCGCAGGTACTCACTAACTGTTTCACCACTGTTTTGGTGCGTTTCCAAGTACTGGATGTACAGCTCTTCGCCCCCTGTGACATTACCATATGCGTTGTCCAGCTCCTGAAGATAGACACTTGGGGCAGCCTGAAGACCAACACGTAAGGCCACATTCAACGCTGGGGAGAGTAAGCTGTTAAGTATCGCACTGCGCTTCTGATTTTCGTTCAGAGTGAGGTCTTTTAGCCTCTGTTTGGCACGAAGCTGCCATGTGCTAAAATCTGCCTCAGTGTGGGGTTTAGGGAAATTACCAGAGAATGCTGGTAGCTCTTGTGGGGTGGCAGCATATGTCTGGGAGTCATGCTTGACTATATGTTCCACTAAGACACGATGAGTATCAGCTGGTATGGGGATGACGAGTGAGGGGTCAGCATTGGGCACTTGTGCATCTGAGGgatattttacatcactgtCGACACCCCTGTTTGCATCAGAGAGGAAATCTTGTTTGCAACGAGGGGCAGGAGTTGAGGTTAAAGGACTAGTTTTGTGCTCTTTCCTTCCACTCATATAGCCCATGGCTTTTTGGCTCAAGTTAATAGGACTGACATTGTAAGTGGTGGCTAGCTCCTCAATTTTCTCTCTAAAGTTAACTGTCATATCATCAATGACACGAGCTAATGGGGCTAGTTTTTCACTCTTAGGAGTTGTCTCTATTTTGTCTGGGCAGTACTCCTCTAGCTGAATTACCTCCCAGTGAGAGCCACTACCATCTGGATGCTCTGCTTCTAAAAGCATTGGAGTTACGCATTCTCGAAATTGGCATAAAATAGTACTGAGTTGTACATCAATGTGTTGAATCTTGACTACATGGTCTAGTAGGTCGAACACTTCCTGCACTGTTTCTAAATTGACCTTTGCCATATCACCTTTGAGGATGACTGTACATTCTGGGTCAAACCCATACTGTTCACATAACTCCATTTTACCAACTCTTTAAATGAGTCACAGCTATTGAATTTTCAATTAGAcagattttcagaaaatgaaaaaaaaaattagaaacgCTCCAGTCCctttaaaatgttccaAGCCAAATAAATGAGCCACAAAAGAAACTGATATAACTGGTAGTGAAGGGCATTTATTTTTGGGTCGGTAGCAGTGTACTACCTGTGTCCAACTTAATAAGAGTTTAGTGGACTGGAGCGTTTCTTTCTCTCAGCAATGAGTAAAATATTTCAATtacatgttatatatatatagagacacTTATGAAAATAATAcgtgtataaaaataaaaaaatatatacatatatttatataaaatgtacactGTCACACTTCCCTGAATTCACCTTGTATGAATGTaattaaacccaaataaaaaaaaatatattcactgAACAATATTGAAGAGCTCTTTAACCTTGAAAAGTATATAATTGTTTTCCAGAGAACAGTTCCTTTAAATGTTCGTgaagtagacaaaaaaaaaggaattgaaACAGTCCTTGAACAATTCGTACTCCGGGAGGAAAAATTGaaggaaaaatgcaaaaaaaaactatttgggtacccaacaaaaaaaaaaatatatatatagaaactcAATTCAGTTTACTTAATGATGCGGCCGTCTCACTCTCCTTCACTCTccgcctcactctctctctctctctcagcttggAAAGTAGCTTGAGCACACCACCAGTCTAGCAGGAGAATCAGTAAACACGAGTTAATAATATGACGGCAGCTGGAGCTAGCTGCAGCTATCagacctctctctcccttcgcGCCTAATCGTCTGAGCAGAGTTTAATCTTATACAGAGAACACAATCTATAAgtacacattaataaaaatgaaaatacccaaatactgttttacaataagcatattaaacaaacatacactTTTAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80591 True 7696 TUCP 0.43 4 48870167 48879623

Neighbor

gene id symbol gene type direction distance location
cacna2d3 cacna2d3 coding upstream 451955 47998093 ~ 48418212 (+)
LOC103038409 LOC103038409,LOC108411948,LOC107724878,LOC107667523,LOC107689282,LOC107711839,LOC107602832,LOC107600045 coding upstream 936556 47927955 ~ 47933611 (+)
il17rb NA coding upstream 976212 47880396 ~ 47893955 (+)
cacna1d cacna1d coding upstream 1013635 47711376 ~ 47856532 (+)
LOC103044878 NA coding upstream 1197870 47664880 ~ 47672297 (+)
cep350 NA coding downstream 323645 49203268 ~ 49268872 (+)
LOC103029228 NA coding downstream 393371 49272994 ~ 49308775 (+)
LOC103028608 xpr1a,xpr1,LOC107755298,LOC107758009,LOC107699288,LOC107665065,LOC107603171 coding downstream 590809 49470432 ~ 49539741 (+)
sin3b sin3b,LOC106613916 coding downstream 669021 49548644 ~ 49568835 (+)
LOC103028292 def6,def6a,LOC107550223,LOC107757990,LOC107755289,LOC107700524,LOC107599059 coding downstream 691089 49570712 ~ 49600806 (+)
G59772 NA non-coding upstream 349885 48519069 ~ 48520282 (+)
G59735 NA non-coding upstream 391404 48478320 ~ 48478763 (+)
G59734 NA non-coding upstream 392057 48477837 ~ 48478110 (+)
G59733 NA non-coding upstream 435964 48433973 ~ 48434203 (+)
G59732 NA non-coding upstream 438936 48430922 ~ 48431231 (+)
G59788 NA non-coding downstream 28092 48907715 ~ 48908027 (+)
G59793 apeh,LOC105013991 non-coding downstream 42967 48922590 ~ 48925434 (+)
G59798 NA non-coding downstream 48835 48928458 ~ 48928806 (+)
G59853 NA non-coding downstream 153214 49032837 ~ 49035805 (+)
G59855 NA non-coding downstream 156990 49036613 ~ 49037045 (+)
gnb1 gnb1,gnb1a,LOC103044197,LOC104956353,LOC107666091,LOC107595416,LOC107385217 other upstream 1208810 47623554 ~ 47661357 (+)
G59257 cdk11a,LOC108265382 other upstream 1988276 46852364 ~ 46881891 (+)
G58971 NA other upstream 3080013 45789711 ~ 45790154 (+)
LOC103029434 dgcr6,LOC103029434,LOC108430318,LOC107572069,LOC107721026,LOC108265986,LOC105899531 other upstream 4003329 44852780 ~ 44866838 (+)
G58696 snrnp200,LOC106579886,LOC106585548 other upstream 4269207 44595233 ~ 44600960 (+)
G59806 NA other downstream 118537 48998160 ~ 48998471 (+)
lhx4 lhx4,LOC108412864,LOC107665078,LOC107755297,LOC107599001,LOC107699337,LOC107550233,LOC107758007 other downstream 442655 49322278 ~ 49370251 (+)
G59961 NA other downstream 543893 49423516 ~ 49437613 (+)
LOC103025235 LOC103025235,LOC108413084,LOC108265140,LOC107598993,LOC107665077,LOC107755310,LOC107603028 other downstream 987995 49867618 ~ 49990417 (+)
LOC103045694 NA other downstream 1759871 50639494 ~ 50652906 (+)

Expression


Co-expression Network