G60059


Basic Information

Item Value
gene id G60059
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 50081636 ~ 50085033 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU80931
tttttggtagcatcagtgtgcactattaaaacagcaatgtgcaacataataaaaaaatacaggaacagtcatgtacaaaataatagaacaattagagccccaacaaactgaactctatcctactataacagttaaacatgaaaaataagacttgaaGACTTTTtttggtccctgagaatgacaagtttttttctttaacaaagatatattattaactttatctgagagaaagatgctcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80931 True 240 lncRNA 0.30 2 50081636 50085033

Neighbor

gene id symbol gene type direction distance location
b3gnt3 b3gnt3 coding upstream 94523 49970111 ~ 49987113 (+)
LOC103027051 NA coding upstream 113444 49932765 ~ 49968192 (+)
LOC103024709 NA coding upstream 271557 49797273 ~ 49810079 (+)
LOC103027656 NA coding upstream 290163 49784459 ~ 49791473 (+)
LOC103024391 NA coding upstream 300155 49777590 ~ 49781481 (+)
kcnn1 kcnn1b,LOC108413565,LOC107598990,LOC107589798 coding downstream 26434 50111467 ~ 50193499 (+)
LOC103026155 LOC108413566 coding downstream 115033 50200066 ~ 50246511 (+)
LOC103021573 LOC108414650 coding downstream 162676 50247709 ~ 50272906 (+)
spag17 NA coding downstream 250516 50335549 ~ 50368567 (+)
LOC103025544 LOC108413600,LOC107725316 coding downstream 286060 50371093 ~ 50420324 (+)
G60047 NA non-coding upstream 55629 50025489 ~ 50026007 (+)
G60041 NA non-coding upstream 80516 50000909 ~ 50001120 (+)
G60034 NA non-coding upstream 91315 49939516 ~ 49990321 (+)
G60017 NA non-coding upstream 326041 49755283 ~ 49755595 (+)
G60013 LOC105906375 non-coding upstream 397970 49680642 ~ 49683666 (+)
G60060 NA non-coding downstream 8079 50093112 ~ 50093477 (+)
G60065 NA non-coding downstream 188643 50273676 ~ 50276276 (+)
G60121 NA non-coding downstream 391886 50476919 ~ 50566228 (+)
G60081 NA non-coding downstream 569395 50654428 ~ 50660806 (+)
G60150 NA non-coding downstream 704281 50789314 ~ 50798761 (+)
LOC103025235 LOC103025235,LOC108413084,LOC108265140,LOC107598993,LOC107665077,LOC107755310,LOC107603028 other upstream 91219 49867618 ~ 49990417 (+)
G59961 NA other upstream 644023 49423516 ~ 49437613 (+)
lhx4 lhx4,LOC108412864,LOC107665078,LOC107755297,LOC107599001,LOC107699337,LOC107550233,LOC107758007 other upstream 711385 49322278 ~ 49370251 (+)
G59806 NA other upstream 1083165 48998160 ~ 48998471 (+)
G59782 NA other upstream 1202013 48870167 ~ 48879623 (+)
LOC103045694 NA other downstream 554461 50639494 ~ 50652906 (+)
G60481 LOC108440552,LOC108265824,LOC107743114,LOC107552217 other downstream 1191167 51276200 ~ 51286140 (+)
hdac6 hdac6,LOC107584872,LOC107674364,LOC107701824,LOC107552211,LOC107743106,LOC107727426 other downstream 1302537 51387570 ~ 51409262 (+)
otud5 otud5,otud5a,LOC107653422,LOC107743098,LOC107734530,LOC107674365,LOC107584889 other downstream 1680046 51765079 ~ 51826103 (+)
LOC111192705 pim2,LOC107601747 other downstream 1743321 51828354 ~ 51832271 (+)

Expression


Co-expression Network