enkd1 (enkd1,LOC107670972)


Basic Information

Item Value
gene id enkd1
gene name enkd1,LOC107670972
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 35259920 ~ 35265350 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229136.3
TGGAGATAGACTCGGCTTGCTGCGTCATCAGGCGGTGTGTTTACGGGCTGAAAACGGACTGAACCGAAAACGCGTTTAAACTACAGGAATTAAGGGACTGGAGAAATCATGTGTGAAGGACCTTCGATGATCTCTGGGCCCATTCCACCAGACCCCTCCCTCTTCCCCGAATACTACAGACGACCTACTTCTGCTCGGGGTCGTCTGGAGGGGAATTCTAAAAGTGGATCTTTAACTCTAAATGGACCCTTAGCCCCAGACCCTGCTCTGCATCCAGGCTGTTACAGCGCCCGCCCCGCTCATCCTCCTCCTCGCATCGGCCCAAACGCCAAACACATTCTAGAAAGAAGCCAGAAAGGAGAGGTGGGGGCTCTCCTTAAACTGGAGGGAGTCTGCCTGAAGCCCCCCCCTGTTAAACACAAACCTGCAGCTCAGGATTATGGGAAAGAGAACGTGCGACGGCTGCGTGAGATCCAGAGACGATTCCGTGAGCAGGAGGCGCAGAAAGAGCGAGCAAAGCCGGTTCCTGTCAAAGCCCTGTGGAGCTCTCCCAAATACCAGGACATCCCCTCCAGGGTCATGGCCCAGTTACAAGAAAAAAGCCACCCCAAAAAGGCAGAATGCCAGAACTTCCTAAGAGCTCACTCTGTGTGTGGGGCGGGGGGTCGGCCTCAACCTAGTCGGCCTCAGTCTGTGTCGGCATCACCCTCTGAAAACGGGCAAAAACCTCAAACAGCAGATCCAGAGATGGAGGTGAGAGGACACTTTGTTGACTTTGTGAGTCATAATGCACGCGCTGCGAGAAAGACCGCACTGAAACGCTCTCAGTCTCTACAGGACCTGAACAACAAGCAGCCGCCGAGCGCAGTGAAGGGCCGAGTCCCCCAGTATCTGGAAGAAAGAAAGGAGCAGTGGAGGAGAGAGGCAGAAGAGAGACGGAGGAACGCTCCTGACCCGTCTGCACCTGCTGGACACACTCAGATGTccgacagagagaggagagaaactcTAAATTCACTCAGAGAAAatcACAGGTCTCTGGTGAGTGAGCTGCTCTCTCTGCCGGTCAGGGCGGATACGGTGAGCGTGAGATCACGCCGAGCAGAGCTGGACCAGCGTCTGTCTGAAGTGGAGGAGGCCATCAAGATATTCTCTCGTGATAAAGTCTACGTAAAAAATGActcttaataaacacaattacagTGTTCATTACTTACCCATCACATTTATCACATATAGTCAAACACACTGAACCTCAGGTGTTTTgatagacaaaatatatttctaaaataaataattcattaaataacAAAGCATTAGTTAAAGTTTGTATTTGAAAGAGGAATCTATTCACTGTTAATTAatatcaaaataacaaaaaatgtaattgccATAATTTGTGTTAAACTCTGAGAGGTGCATTATTTGTCTTCTTATTTATGGCATCACtcagaaatgtaattttaaggAATACATTTAAAATCTCAAGTGTtgatttttaatgtatattttctgtgatttctggaacttttatattttcattaagtGGCTTCAGCTAAAGACGTTTCAATATAATGATTTTCTGCCATTTTGCCGTTTTAAATCACTGTGCCTTTTACAGTATAATGAATGGGGTAGAATAGAAAAAGgtgggttaaaaaaataatctaccaTATGTACTGCAGTCTagtttaaattatgttatttagtgttaaaaCTGTGGGAATGGTAAAGAAAGaatgttatttttgttgttaacaaaatattaatttaaataatatatattattaataacataaataacaacaaacaaactattttttacATAGTGCTGCCTAGGAATCCATGTGTGATCTGTGTGATGTGTTTGATCTGTGTGATCTATATGAGTTGAATAAATATTTCATGTGATTTTGAA

Function

symbol description
enkd1 Predicted to be active in cytoplasmic microtubule. Orthologous to human ENKD1 (enkurin domain containing 1).

NR:

description
enkurin domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229136.3 True 1918 mRNA 0.44 8 35259920 35265350

Neighbor

gene id symbol gene type direction distance location
LOC103034472 NA coding upstream 64255 35191804 ~ 35195665 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding upstream 170735 35083719 ~ 35089185 (+)
LOC103037259 pi4ka,LOC108440297,LOC107671001 coding upstream 176628 35039169 ~ 35083292 (+)
LOC103047196 NA coding upstream 241195 35015117 ~ 35018725 (+)
gins4 gins4,LOC107747805,LOC107698091,LOC107678389,LOC107556221 coding upstream 254200 34990826 ~ 35005720 (+)
polb polb coding downstream 618 35265968 ~ 35274621 (+)
mrpl40 LOC107753002,LOC107671004,LOC107754402,LOC107559600 coding downstream 28573 35293923 ~ 35296002 (+)
gle1 gle1,LOC102792584 coding downstream 34444 35299794 ~ 35308446 (+)
LOC103031612 NA coding downstream 43275 35308625 ~ 35311487 (+)
naif1 naif1 coding downstream 71922 35337272 ~ 35340070 (+)
G56479 NA non-coding upstream 5918 35253318 ~ 35254002 (+)
LOC111192732 NA non-coding upstream 41138 35217891 ~ 35218782 (+)
G56465 NA non-coding upstream 60652 35197445 ~ 35199268 (+)
G56459 NA non-coding upstream 82941 35171898 ~ 35176979 (+)
G56444 NA non-coding upstream 91899 35111041 ~ 35168021 (+)
G56482 NA non-coding downstream 20101 35285451 ~ 35287472 (+)
G56487 seta,LOC103031932,LOC107752982,LOC107699670,LOC108265615,LOC107754404,LOC107671021 non-coding downstream 46765 35312115 ~ 35315555 (+)
G56492 zdhhc12,LOC107560045,LOC106955948 non-coding downstream 54529 35319879 ~ 35320773 (+)
G56499 NA non-coding downstream 126952 35392302 ~ 35468036 (+)
G56649 NA non-coding downstream 264554 35529904 ~ 35530234 (+)
LOC103047498 NA other upstream 270635 34961800 ~ 34989285 (+)
G56414 tcf7l1,LOC107721095,LOC107556226 other upstream 508357 34713218 ~ 34751563 (+)
fgf17 fgf17,LOC103025711,LOC107698084,LOC107678395,LOC107721084 other upstream 748236 34503114 ~ 34511684 (+)
LOC103037863 adra2b,LOC108440671,LOC108264887,LOC107554404,LOC107753091 other upstream 1619843 33635152 ~ 33640077 (+)
izumo1 NA other upstream 1664102 33564828 ~ 33595818 (+)
LOC103032256 dynll1,LOC103397138,LOC107554284,LOC107559583,LOC100698873 other downstream 10729 35276079 ~ 35284271 (+)
G56504 NA other downstream 155368 35420718 ~ 35458877 (+)
G56701 pola2,LOC107710902,LOC107657899 other downstream 690754 35956104 ~ 35964510 (+)
G57066 NA other downstream 1739923 37005273 ~ 37005798 (+)
agtpbp1 agtpbp1 other downstream 3843894 39109244 ~ 39153476 (+)

Expression


Co-expression Network