tti2


Basic Information

Item Value
gene id tti2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 31873616 ~ 31879260 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229343.3
GGTGAAAACTATGACAAAAAGTATTATTCGTCAACACGACATTAACACTGGCCTACAGTTAGCTTAGAAGATCTCGACGGTAACAGAACCTGCGGCGTGTGGCTGACGTTTCTGGTAAGACTTATTTTATAGCTGCACACTGAAACTCTGCTGGAAGGTGCCTGGATGAAGAGTGCTGCTATTACATTTACACTCAGGCTCAAGTTTACTGTACAATAGCTGAGCTAAACCCCTGCAATCAACGTACTGCACCGCTCTTAGTGTAGATGCGAAGATAAAATGCCTGCAATCAAACATTACGCTCTAGAAAGTCCTTGGAATCCAAGCGAGACCGCGGTGAGTGTGCAAGGATGTGTCTCAAACGTCTGCACGCTCCCTAGGTAGTGCGCACAACGAAATCtgcgagaaaaaaaacattttgtgtaGTGCGAGGACCAAATTCTTCATTAAATTGTTTTCAAAGCTATAAGACTAGTCTAAATTTGCTAATAGATTAATGTCTAAAATCGCTAATAACTAACCCAGATAGATATAAAACATCACAGAAATGGAGCTGGCTCATACTCTTAAAGACCTCAGTCTCGCTGAAGGGTCTGAGAACAGCAGCGGAGCTAATTCTGTTATCAGGGTTTTGTCTCAGACCCGTCAGCGCTTTGTGGCTGAAGAGTCAGTAAAGCCGAGTCTTCTGAAGACAACGCTGGAGCTCCTGCAGGGCCGGGAGCTGCGCTGGCTCTTCCCGGAGTGGAGCTCAGATTTTCGGGCAGCCTATGTGGAGCTGGTGGGCTGCTTCACTGAATACGCCGCTCTGCCTGTGTGTGACTCTGACAGCGGGGTTTTACCCGCCAGCAGCTACGAGCAGATCCCTCCTAAAGCTGAGGCTGTAGGGTCTGTGCTGCTGGCTCTCACCGCTCAGCTTGGAGAGGCTGTCCGTTCCAGCGACTCTGCAGTTTCAGGTACCGGCAGGGCTCTCCTTCGCGCTCTTGGACCCACACTTTGTGTTTTCTCCATCACACACCTGCAACTCCATCCCTGGACCAGCGAGGTTTCCAGAACATGCGCTCTGAAGCTGCTCAACTCAACAGTCAGAGCAACAGGCAGCGGgtcactgctggagctgctgtgtGGTAAAGAGACTGATGGAGATCAAACAGGAATGCTGGGTCCGATTCTGGACACGCTGCAGCCAGAGCTGACCAAGGACATCTGGAAGCGCAACCAGGCTGTCAAGCATGTGTTCTCCTGGGTGCTGGTTCAGGTCAGACGCCCATGGTTAGCTGACTACTTGGAGAAGGtcttccctccctctctgctTATATCTGATGATTACAGAACAGACAACAAAATACTGGGAGTACACTGTCTTCACCACATTGTACTTAATGTGcCTGCCGCTGACCTTAGGCAATTCAACAGGGCTCAGGTACTATACCATGCCCTATTTAATCACCTGTACACATCTGATGCACCACTTATACAGGTGGTTCTGCCCTGTATGGTAGATTTGCTGTCAGTCCTTGAAAAGCCCCATGTCCAATCAGGACCACCAAGGAAGCCTAACCACTTTGACGATGTTTTCCGTCTCATTTTAACACACATGGAAATGGAACACAAGCTGGCACTGCGCCGGATCTATGCCAGCAGCCTCCTTCTGTTTATTGAAAAGATGGGTATAGGAATCGCTCGCCATCTGAAGAGGCTGGAGAGGGTCATTGTGGGGTATCTGGAGGTGTCCGATGGTCCAGAAGAGAAGGCCAGGCTGAGCACACTGGAAGTTTTAGAAAGAACAATAAAGACTGCCTGGCCaagGATGGAGTGCAGGATGGATGTTCTAAGTAAGAGTTTGCTGAGGTTCCTTGTAGATATTTCATCAGAGCCACTGGCTCCTGAGCTCAGGGAGGAGCTCATGACCAGAGCTTCACGCTGCCTGCTACTGCTGGACCATTGCTCACAGGGTAAACTGCTGGTGTTGCTAAAGGATGTGGACAGTAGCTGTGTTTCTGACAGTGTCCTGAAGTGCATACAGAACCTTGGAGCAGCTCAAGGTGTTTGAGATAAGTGCACCATACCAGAATAGTCAGCCAGCAGGCATCTCTGAATGTGCTATGGATGCACGCATTTTGCCTTGGGCTATTGCTCTACTGAGCCTGGTGCTCTGAAGGATGGGTGAGAATGGAAAAtagactttttctttttttatgttaaaatataagtattacagaatatttttatatgaatcATATTGGTACAAATGTAATATGaggtaaataaaatgtgttcatcagtta

Function

NR:

description
TELO2-interacting protein 2 isoform X1

GO: NA

KEGG:

id description
K23115 TTI2; TELO2-interacting protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229343.3 True 2285 mRNA 0.48 7 31873616 31879260

Neighbor

gene id symbol gene type direction distance location
LOC103027824 NA coding downstream 24099 31844074 ~ 31849517 (-)
LOC103045458 olfml2a,olm2a,LOC105894692,LOC104951789 coding downstream 48113 31793087 ~ 31825503 (-)
LOC103043728 NA coding downstream 114535 31743872 ~ 31759081 (-)
LOC103041868 NA coding downstream 262662 31598462 ~ 31610954 (-)
LOC111192668 NA coding downstream 293828 31577353 ~ 31579788 (-)
slc18a1 slc18a1,LOC107702874,LOC107722997,LOC107591929,LOC106587027 coding upstream 5090 31884350 ~ 31898822 (-)
LOC103047383 ppiaa,LOC108411171,LOC107691558,LOC107756846,LOC108265559 coding upstream 32779 31912039 ~ 31916431 (-)
LOC103029395 ogdha,LOC108411168,LOC107756845,LOC107691557,LOC108265558,LOC107566960 coding upstream 41561 31920821 ~ 31963870 (-)
adam9 adam9,LOC107591921,LOC107722987,LOC107702867,LOC107691559,LOC107566966 coding upstream 89265 31968525 ~ 32018419 (-)
fam160b2 fam160b2 coding upstream 146400 32025660 ~ 32039348 (-)
G55874 NA non-coding downstream 4419 31867399 ~ 31869197 (-)
G55858 NA non-coding downstream 9938 31819932 ~ 31863678 (-)
G55788 NA non-coding downstream 143372 31728783 ~ 31730244 (-)
G55779 golga1,LOC107703180 non-coding downstream 160680 31710305 ~ 31712936 (-)
G55757 NA non-coding downstream 292547 31575369 ~ 31581069 (-)
G55884 LOC108411167 non-coding upstream 29756 31909016 ~ 31910332 (-)
LOC111192671 NA non-coding upstream 240345 32119605 ~ 32122006 (-)
G55939 LOC108440819,LOC108265606 non-coding upstream 341884 32221144 ~ 32239724 (-)
G55938 NA non-coding upstream 362161 32241421 ~ 32242539 (-)
G55952 NA non-coding upstream 373683 32252943 ~ 32253161 (-)
LOC103043418 arpc5la,arpc5l,LOC108411248,LOC107571143,LOC108265305,LOC107550963,LOC107753090,LOC107676626 other downstream 133395 31731464 ~ 31740221 (-)
LOC103027498 LOC108411246,LOC106585447 other downstream 182808 31635481 ~ 31690808 (-)
LOC103046862 LOC108410878 other downstream 1939186 29896515 ~ 29934430 (-)
kiaa1671 NA other downstream 2032863 29744028 ~ 29840753 (-)
LOC103031600 lrrc75ba,LOC108414797,LOC107753104,LOC107712478,LOC105891565 other downstream 3273106 28554727 ~ 28600510 (-)
LOC103021360 LOC108440818,LOC107659619,LOC108265551,LOC107726210,LOC107553829,LOC107684495 other upstream 892767 32772027 ~ 32802160 (-)
LOC103023237 NA other upstream 1269814 33149074 ~ 33177650 (-)
LOC103038119 LOC108412501,LOC107754395,LOC107671045 other upstream 3211470 35090730 ~ 35108420 (-)
acaa2 acaa2,LOC107671002 other upstream 3406162 35285422 ~ 35293421 (-)
c6h22orf39 NA other upstream 3417081 35296341 ~ 35299750 (-)

Expression


Co-expression Network