nudt18


Basic Information

Item Value
gene id nudt18
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 32020346 ~ 32024618 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229348.3
ATAACTTTGCTAAAGCGTTGTTTCTGTTTAGCAACAGTAGTTAATCTCTATTATCAGTATTATTTTCCGATATTGAGTACGTATTTTTATCCCAAAATGAAAATAAGTCATAAAGTATGTGCGTTGTTTAAAACAAGTTGGTCATTTAACCCCGGTCCCTTACTCTTACAGCCAATAGCATTGCAGCTAGCAGCGCTTGCGTACAGGCAGGCTTGTTGTGGAACTGGCCGGTGGTTGAGGCATTAGCTCAGCACGGCGCTGAACCAAAGTGAAACTGAATTGGCTGTAGTTGGCGGTGTCCCAATCAGCAATATGGGCTCTGAGGGACTTGAAGAAGAAACCGTGGAGAAGATCCTGAACGGAGAAGGACTGGAGGTCACAGAATATGACTGGACCCCCGAGGAGCCGAAGCCTGTCACCCTTAGGTCGAATGTTTGTTATATTGTTGCTGCAGTCATCTTCAATGCCAAGGGGGAGGTGCTGATGGTGCAGGAGGCGAAGAAGGATTGCTATGGGCAGTGGTACCTTCCCGCAGGCCGCATGGAACCGGGGGAGAGTATTGAGGAGGCTGTGCAGAGGGAGGTGAAAGAGGAGGCTGGAGTGGACTGTCAGCCGGTCACCATGCTGCAGGTGCAGGAAAGCGGCCCGCAGTGGATCCGCTTCACCTTCCTCGCTGAGATCACAGGTGGCAGTCTGAAGACAAGGGCTGAAGCAGATTCTGAGTCTCTGCAGGCTCAGTGGTGGGATCGAGAGGCACATCTTCCTCTTCGTGCCTGGGACATCCTGACCCTTATAGAGGCCGGCCTCAAGTACCACCAGAAGCCGTGGTTCCCAGTGTGTCTGCCCACTGACCTGCCCTGTGAAGTGGTCTGTCAGAGAATACTTCTGGTCTTTGCCCCCAGTGACCCTGACAATGAAGAGAATGTATGGTTGCTGCTGTGCAATGGTTCTGCTGACAGTGATGCTGAGACACACCCTCACCTTCCTGTTTCACTAgcagtgaaaaaacacacagtcaCATGGGCAGGCCGCAGATTGCTCCAGGAGTGCATGGTCCCTTGTGAAGCCTTGCATGTCGACATCAGCGGGATCCTGAGCGTGCAGCATAATGGGAGGGTTCATGGCAAAACAGACGGGCTCTGTTTGAACACACTAGTGACGGTGGAATATATAGAAGGGTTTCCAGGAGATCATCAAAGTCCACCACCACTGGAGAATAAGAGATATAAATGGCATAAGGTGATCAATCAAAGGCTGAAGACGAAGATACTGCAGAGAATAAAATATAACTCCCTTCTACCTTTATACAGCCTTCGATGATGGGATGGACTGAGATCTTCTGACTGTAAAGCATGGTTGGACATGGCCTCCGATGTTAGTTTAAGATGTTTTTGGGAATAGCTGTTGCAGAACGACACCTTATTATCTAAGCCATTTACACCATTCATCTGACCAAACTAATGAGCAATAGACTACATATTGATTTCAGAGTTCTATATTATCGGAGTTTATAGTGGATAATGGGATAAGGACATTTTAGAAATGTTGAAGACTTCTTTGCTGATTTCAAAAAAATCCATCACTGCTTTagaattgtataaaaaaaaaacaatgaaatcacagtt
>XM_022670505.1
TTTCGCTTTTTTATGGTTAACATTTTGATAACAATTTGCTGATATAACTTTTAATTcgtaataaaagcgatataacatatattttatgctcttgttttttttatcagcgAGCAGAACTGGCCGGTGGTTGAGGCATTAGCTCAGCACGGCGCTGAACCAAAGTGAAACTGAATTGGCTGTAGTTGGCGGTGTCCCAATCAGCAATATGGGCTCTGAGGGACTTGAAGAAGAAACCGTGGAGAAGATCCTGAACGGAGAAGGACTGGAGGTCACAGAATATGACTGGACCCCCGAGGAGCCGAAGCCTGTCACCCTTAGGTCGAATGTTTGTTATATTGTTGCTGCAGTCATCTTCAATGCCAAGGGGGAGGTGCTGATGGTGCAGGAGGCGAAGAAGGATTGCTATGGGCAGTGGTACCTTCCCGCAGGCCGCATGGAACCGGGGGAGAGTATTGAGGAGGCTGTGCAGAGGGAGGTGAAAGAGGAGGCTGGAGTGGACTGTCAGCCGGTCACCATGCTGCAGGTGCAGGAAAGCGGCCCGCAGTGGATCCGCTTCACCTTCCTCGCTGAGATCACAGGTGGCAGTCTGAAGACAAGGGCTGAAGCAGATTCTGAGTCTCTGCAGGCTCAGTGGTGGGATCGAGAGGCACATCTTCCTCTTCGTGCCTGGGACATCCTGACCCTTATAGAGGCCGGCCTCAAGTACCACCAGAAGCCGTGGTTCCCAGTGTGTCTGCCCACTGACCTGCCCTGTGAAGTGGTCTGTCAGAGAATACTTCTGGTCTTTGCCCCCAGTGACCCTGACAATGAAGAGAATGTATGGTTGCTGCTGTGCAATGGTTCTGCTGACAGTGATGCTGAGACACACCCTCACCTTCCTGTTTCACTAgcagtgaaaaaacacacagtcaCATGGGCAGGCCGCAGATTGCTCCAGGAGTGCATGGTCCCTTGTGAAGCCTTGCATGTCGACATCAGCGGGATCCTGAGCGTGCAGCATAATGGGAGGGTTCATGGCAAAACAGACGGGCTCTGTTTGAACACACTAGTGACGGTGGAATATATAGAAGGGTTTCCAGGAGATCATCAAAGTCCACCACCACTGGAGAATAAGAGATATAAATGGCATAAGGTGATCAATCAAAGGCTGAAGACGAAGATACTGCAGAGAATAAAATATAACTCCCTTCTACCTTTATACAGCCTTCGATGATGGGATGGACTGAGATCTTCTGACTGTAAAGCATGGTTGGACATGGCCTCCGATGTTAGTTTAAGATGTTTTTGGGAATAGCTGTTGCAGAACGACACCTTATTATCTAAGCCATTTACACCATTCATCTGACCAAACTAATGAGCAATAGACTACATATTGATTTCAGAGTTCTATATTATCGGAGTTTATAGTGGATAATGGGATAAGGACATTTTAGAAATGTTGAAGACTTCTTTGCTGATTTCAAAAAAATCCATCACTGCTTTagaattgtataaaaaaaaaacaatgaaatcacagtt
>XM_022670506.1
ATAACTTTGCTAAAGCGTTGTTTCTGTTTAGCAACAGTAGTTAATCTCTATTATCAGTATTATTTTCCGATATTGAGTACGTATTTTTATCCCAAAATGAAAATAAGTCATAAAGTATGTGCGTTGTTTAAAACAAGTTGGTCATTTAACCCCGGTCCCTTACTCTTACAGCCAATAGCATTGCAGCTAGCAGCGCTTGCGTACAGGCAGGCTTGTTGTGGcgAGCAGAACTGGCCGGTGGTTGAGGCATTAGCTCAGCACGGCGCTGAACCAAAGTGAAACTGAATTGGCTGTAGTTGGCGGTGTCCCAATCAGCAATATGGGCTCTGAGGGACTTGAAGAAGAAACCGTGGAGAAGATCCTGAACGGAGAAGGACTGGAGGTCACAGAATATGACTGGACCCCCGAGGAGCCGAAGCCTGTCACCCTTAGGTCGAATGTTTGTTATATTGTTGCTGCAGTCATCTTCAATGCCAAGGGGGAGGTGCTGATGGTGCAGGAGGCGAAGAAGGATTGCTATGGGCAGTGGTACCTTCCCGCAGGCCGCATGGAACCGGGGGAGAGTATTGAGGAGGCTGTGCAGAGGGAGGTGAAAGAGGAGGCTGGAGTGGACTGTCAGCCGGTCACCATGCTGCAGGTGCAGGAAAGCGGCCCGCAGTGGATCCGCTTCACCTTCCTCGCTGAGATCACAGGTGGCAGTCTGAAGACAAGGGCTGAAGCAGATTCTGAGTCTCTGCAGGCTCAGTGGTGGGATCGAGAGGCACATCTTCCTCTTCGTGCCTGGGACATCCTGACCCTTATAGAGGCCGGCCTCAAGTACCACCAGAAGCCGTGGTTCCCAGTGTGTCTGCCCACTGACCTGCCCTGTGAAGTGGTCTGTCAGAGAATACTTCTGGTCTTTGCCCCCAGTGACCCTGACAATGAAGAGAATGTATGGTTGCTGCTGTGCAATGGTTCTGCTGACAGTGATGCTGAGACACACCCTCACCTTCCTGTTTCACTAgcagtgaaaaaacacacagtcaCATGGGCAGGCCGCAGATTGCTCCAGGAGTGCATGGTCCCTTGTGAAGCCTTGCATGTCGACATCAGCGGGATCCTGAGCGTGCAGCATAATGGGAGGGTTCATGGCAAAACAGACGGGCTCTGTTTGAACACACTAGTGACGGTGGAATATATAGAAGGGTTTCCAGGAGATCATCAAAGTCCACCACCACTGGAGAATAAGAGATATAAATGGCATAAGGTGATCAATCAAAGGCTGAAGACGAAGATACTGCAGAGAATAAAATATAACTCCCTTCTACCTTTATACAGCCTTCGATGATGGGATGGACTGAGATCTTCTGACTGTAAAGCATGGTTGGACATGGCCTCCGATGTTAGTTTAAGATGTTTTTGGGAATAGCTGTTGCAGAACGACACCTTATTATCTAAGCCATTTACACCATTCATCTGACCAAACTAATGAGCAATAGACTACATATTGATTTCAGAGTTCTATATTATCGGAGTTTATAGTGGATAATGGGATAAGGACATTTTAGAAATGTTGAAGACTTCTTTGCTGATTTCAAAAAAATCCATCACTGCTTTagaattgtataaaaaaaaaacaatgaaatcacagtt

Function

NR:

description
8-oxo-dGDP phosphatase NUDT18 isoform X1

GO:

id name namespace
GO:0046057 dADP catabolic process biological_process
GO:0046067 dGDP catabolic process biological_process
GO:0046712 GDP catabolic process biological_process
GO:0044715 8-oxo-dGDP phosphatase activity molecular_function
GO:0044716 8-oxo-GDP phosphatase activity molecular_function
GO:0044717 8-hydroxy-dADP phosphatase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K17817 NUDT18, MTH3; 8-oxo-dGDP phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229348.3 False 1625 mRNA 0.47 4 32020346 32024618
XM_022670505.1 False 1518 mRNA 0.47 3 32020590 32024618
XM_022670506.1 True 1632 mRNA 0.47 4 32020346 32024618

Neighbor

gene id symbol gene type direction distance location
LOC103029092 NA coding upstream 110535 31905217 ~ 31909811 (+)
LOC103046271 NA coding upstream 151102 31867154 ~ 31869244 (+)
mak16 mak16 coding upstream 156637 31857426 ~ 31863709 (+)
rnf10 rnf10 coding upstream 177242 31831354 ~ 31843104 (+)
pop5 pop5 coding upstream 189726 31827417 ~ 31830620 (+)
LOC103022464 rassf2a,LOC108440819,LOC108265606,LOC106580442,LOC107687959 coding downstream 196559 32221177 ~ 32242559 (+)
LOC103025291 NA coding downstream 219942 32244560 ~ 32251009 (+)
rflna fam101a,LOC107687957,LOC107553832,LOC108412767 coding downstream 393061 32417679 ~ 32440011 (+)
LOC111192715 NA coding downstream 688931 32713549 ~ 32729908 (+)
LOC103026160 NA coding downstream 1304168 33328786 ~ 33360143 (+)
G55846 adam9,LOC104959316 non-coding upstream 36056 31980914 ~ 31984290 (+)
G55821 ppiaa,LOC107756846,LOC108411171,LOC107691558,LOC108265559 non-coding upstream 52203 31911997 ~ 31968143 (+)
G55837 NA non-coding upstream 75957 31939377 ~ 31944389 (+)
G55836 NA non-coding upstream 85649 31933383 ~ 31934697 (+)
G55770 NA non-coding upstream 290098 31728742 ~ 31730248 (+)
G55833 NA non-coding downstream 978 32025596 ~ 32025905 (+)
G55955 NA non-coding downstream 279683 32304301 ~ 32304773 (+)
G55977 NA non-coding downstream 420115 32444733 ~ 32446803 (+)
G55978 NA non-coding downstream 423054 32447672 ~ 32448789 (+)
G55979 ncor2,LOC108412761 non-coding downstream 424880 32449498 ~ 32470210 (+)
G55844 adam9,LOC107591921,LOC107702867,LOC107722987 other upstream 42927 31974681 ~ 31977419 (+)
G55831 LOC107691557,LOC108411168 other upstream 96251 31920820 ~ 31924095 (+)
G55502 NA other upstream 1395300 30347016 ~ 30625046 (+)
G55532 cgnl1 other upstream 1470285 30528862 ~ 30550061 (+)
G55218 NA other upstream 3265529 28754030 ~ 28754817 (+)
LOC103024127 kcnip3a,LOC108440810,LOC107753121,LOC107687962,LOC107684506,LOC107566017,LOC108264878,LOC101482209,LOC107553838 other downstream 34791 32059409 ~ 32150570 (+)
slc23a2 slc23a2,LOC108440813,LOC108265605,LOC107684505,LOC107753122,LOC100702287 other downstream 158459 32183077 ~ 32217411 (+)
G56160 NA other downstream 1333596 33358214 ~ 33366012 (+)
G56193 aplnra,LOC108441910,LOC107753098,LOC107712463,LOC107550977,LOC107703172,LOC107554406,LOC107687998 other downstream 1379956 33404574 ~ 33406650 (+)
izumo1 NA other downstream 1540210 33564828 ~ 33595818 (+)

Expression


Co-expression Network