LOC103045867 (mc3r,LOC103045867,LOC108425022,LOC107751459,LOC107711834,LOC107680356,LOC107669608)


Basic Information

Item Value
gene id LOC103045867
gene name mc3r,LOC103045867,LOC108425022,LOC107751459,LOC107711834,LOC107680356,LOC107669608
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 1999574 ~ 2001170 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231153.2
ttacctttaaaagtaagtttttattctgtttaaaacTCTTTATTCTTTCTATTTTCCTACTAATAATCTTACTCTTATTtagatttctctctctattgttTAGTCCATCTCTGTCCTTTCTATTTGTGTCTGTTTTTGCCTTTAAGTTTCAACAATCTTCttgtttcctttctttttctttgtattgCTTTCTCGTTTTGATTCTTTAGTTTCTTTTGATCCACCTCTTTGTCTCTTCTTTTACACTCTTCTATATCTTTCTTtcatcattttgttttttttttagtctgcaACTTCTCATTGTGTTTAAAACTCCTTTTTTTCCCATTgttctctcttttgttttccTAACTATTGTTTTTTGCCCTATCCACTAGTTTTCTCCCTCCATtctctcattttattttcttgttttccaTCTGCCTCTCTCGCTCGCCGGCTCCCGATGAACGGATCTCACCACCCggtgctcctcctcctcctgcaggaAAGCTCCAACACCAACCTCACCGAAGaatcagaagcagcagcagcttcagaaCCGAGCAATGGAACTGCACCAGCACTGGTTTCCAACAGCAGTACCGCCCCTCCACCAGCGGGGGCGCTGTGCCAGCAGGTTCAGATCCAGGCGGAGGTGTTCCTCGCGCTCGGCATCGTCAGCCTGCTGGAGAACATCCTGGTCATCTCGGCGGTGGCGAAGAACAAGAACCTCCACTCGCCCATGTACTTCTTTCTCTGTAGCTTGGCGGCGGCGGACATGCTGGTGAGTGTGTCCAACTCTCTGGAGACCATCGTGATCGCGGTTTTGAGGAGCCACCTGCTGGAGCTGAGCGATTATTTCGTGAGGCTGATGGACAATGTCTTCGACTCCATGATCTGCATCTCGCTGGTGGCGTCCATTTGCAACCTGCTGGCGATCGCTGTCGATCGATACGTGACGATATTCTACGCTCTGCGTTACCACAGCATCGTTACGGTGCGGAGGGCGTTGAACGCCATTGCTGCCATCTGGCTGGTGTGCATCGTTTGCGGGATCGTCTTCATCGTGTACTCCGAGAGTAAGACCGTCATCATCTGTCTGATCACCATGTTCTTCGCCATGCTGGCGCTGATGGCCACCCTGTACGTGCACATGTTCCTCCTGGCCAGGCTCCACGTCCAGCGCATCGCCGCGCTTCCCCCCGCGGCCAGCGCTGCAGGAAACCGTGCGCCGCGGCAGCAGCACACCTGCATGAAGGGGGCGGTGACCATTACCATTCTCCTGGGCGTGTTCGTCTGCTGCTGGGCGCCGTTCTTCCTGCACCTCATCCTGCTGGTGGCCTGCCCCCAGCACCCGCTCTGCCTGTGCTACATGTCCCACTTCACCACCTACCTGGTGCTCATCATGTGCAACTCCGTCATCGACCCCATCATCTACGCCTTCCGCAGCCTGGAGATGAGGAAGACCTTCAAGGAAATCCTGTGCTGCTTCGGCGAGAGCTGCCAAGCGCCGCTCtgcgagagagagcgcgagagagagcgcgagagagacacagaaaccGAGCGGTCGAGAGAGAGGCAGCAcgagagggagaaggagagcGAGACGGAgtga

Function

symbol description
mc3r Predicted to enable melanocyte-stimulating hormone receptor activity and peptide hormone binding activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in brain and epiphysis. Human ortholog(s) of this gene implicated in obesity. Orthologous to human MC3R (melanocortin 3 receptor).

NR:

description
melanocortin receptor 3-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004977 melanocortin receptor activity molecular_function

KEGG:

id description
K04201 MC3R; melanocortin 3 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231153.2 True 1597 mRNA 0.52 1 1999574 2001170

Neighbor

gene id symbol gene type direction distance location
LOC103027674 LOC108425035 coding upstream 213212 1772919 ~ 1786362 (+)
pym1 pym1,LOC102777374 coding upstream 235499 1760812 ~ 1764075 (+)
LOC103041629 sema3b,LOC107717529,LOC107556489,LOC107669651 coding upstream 537876 1415274 ~ 1461698 (+)
ajap1 ajap1 coding upstream 1522278 354036 ~ 477296 (+)
LOC111192744 NA coding upstream 1730052 263730 ~ 269522 (+)
LOC103028158 cebpb,LOC103028158,LOC107556312,LOC107669676,LOC107751442,LOC108265421 coding downstream 358752 2359922 ~ 2362224 (+)
adipor1 adipor1,adipor1b,LOC108425077,LOC107751445,LOC107679819 coding downstream 464423 2465593 ~ 2474573 (+)
klhl12 klhl12 coding downstream 477421 2478591 ~ 2506196 (+)
LOC103031418 tuba8l,LOC106567204,LOC105022333,LOC106572477,LOC103031418,LOC108265838,LOC108425079,LOC107711852,LOC107679810,LOC107594520 coding downstream 508974 2510144 ~ 2521419 (+)
LOC103026437 LOC108425081 coding downstream 526299 2527469 ~ 2583319 (+)
G48936 NA non-coding upstream 1712 1996411 ~ 1997862 (+)
G48897 NA non-coding upstream 47204 1916595 ~ 1952370 (+)
G48887 NA non-coding upstream 64713 1889907 ~ 1934861 (+)
G48857 NA non-coding upstream 95330 1803757 ~ 1904244 (+)
G48891 NA non-coding upstream 103819 1893918 ~ 1895755 (+)
G48937 NA non-coding downstream 1198 2002368 ~ 2003124 (+)
G48958 NA non-coding downstream 52463 2053633 ~ 2053849 (+)
G48959 NA non-coding downstream 52720 2053890 ~ 2054152 (+)
G48991 NA non-coding downstream 197422 2198592 ~ 2198936 (+)
G49102 NA non-coding downstream 267167 2268337 ~ 2315148 (+)
G48714 NA other upstream 1188309 808155 ~ 811265 (+)
faf1 faf1,LOC107743872 other downstream 981676 2982846 ~ 3152050 (+)
spata6 dnttip2,LOC107700367,LOC107603264,LOC107757995,LOC102796155 other downstream 2198769 4199939 ~ 4239873 (+)
G49475 NA other downstream 2243358 4244528 ~ 4246227 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 3617989 5619159 ~ 5627452 (+)
LOC103023397 NA other downstream 3775882 5777052 ~ 5789265 (+)

Expression


Co-expression Network