dbnl (dbnl)


Basic Information

Item Value
gene id dbnl
gene name dbnl
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 34879820 ~ 34923018 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231480.3
TTCCCTCACTCACCGACGCCGCCCGAGTGAGGTTCCCCCCCTGGATCCGGACGGTCGTGTGCGCGGTCCTGTCCtgtcctttcctttccttcaaACAGAAATGTCTGTGAACCTGAGCAAGAACGGCCCTGCCCTCACCGCCGCATATAAAGAGGTGGTGGACGAGAAATCCGACACTAACTGGGCCTTGTTTACTTATGAGGGAAACAGCAATGATATCCGCTTGGCTGAGAAAGGAGatgGTGGATTGGAGGAGCTGGTTGAGGAGCTGAACAGCGGGAAGGTGATGTACGCTTTCTGCCGAGTCCAAGACCCCAACTCAGGCCTCCCCAAATACGTCCTCATCAACTGGACTGGCGAGGGGGTGAAAGATGCTAGGAAAGGACTTTGTGCCAACCATGTTAGCTCAATGGCAAACTTTCTAAAGggAGCACATGTGACCATAAACGCTCGAGCAGAGGAGGATGTGGAGCCTGAGAGCATCATGCAGAAAGTGGCCAAAGCTTCAGGAGCCAACTACAGCTTCCACAAAGAGTCCAACCGCTTCAAAGACTCAGGGCCTCAAGGACCTGTGGGCTCCGTATATCAGAAGACCAACGCCATGTCTGAAATCAAAAGGACAAATAAAGACACGTTCTGGGCTCAGGCTGAGAAAGACGAGGAGAAAAGGCGtcaggaggagaagaaaaaggcAGATGAGGAAAAGCAGaagctggagaaagagagaaaggatcGAGAGGCTAAAGAAACTGCGGTGAGGGACAAAGTGGCCAAAGAGAGAGCCTCGCAGATCGACGAGCAGAAGAGGTACCAGCAGCAGCTCGAGACAGAGAGTCAGAGTCGGAGGAAACAGgaggaggaggaggcagcaGCACCACCCAAAAGCTTTAAGCGTGGAGAGTCTGTGGAGAAAGCCAATGAGGCTGCGTCTCTCATCTCCCAGCGCTCTGTTAACCCCAGAGAAATGTTCCAGCAAAGAGAGCGAGGCATCGGCCCCAGCAGCCCAGACAACACCCCATCCAGCCCACAGCCAGgGCGGTTGAAAAGCCCTTTTCTGTTTAAGCAGCCTTGCGAGCCTGAGCCGTTTCGGTCTCCTGTTCGCCGAGTCTCACCTGTAGCAGCTGCAGAGCCCAAAGTTGAGGAGTGTCCCACATCTGATTATGAGGAACCAGAGGGAGCAGCTGATGCAGAGTATGAAGatGTGCAGCCGGTCAGTGATCAGTATAACTCTCATGTGGAGCCGCAGCCAGAGTACGAGACAGTAGCGGAGCCAGAGAATGTTTATGAGGAGCCGCCTCAGgTGGAGCAGCAGAACACATACGAGGACGCTGGAGATCGCGGCGTCTGTGCTCGAGCACTTTATGATTACCAGGCTGCTGATGACACGGAGATCTCTTTCGACCCAGACGATATCATCACTGGCATCGAGATGATCGATGAAGGCTGGTGGCGAGGTTACGCTCCCGATGGTCACTTTGGAATGTTTCCAGCCAATTACGTCGAGCTCGTCTAACCGCAGCAGATCCCTCAAACATATCTGGGCAACAACGACTTGCTCCGCCCAGATCAGTGATTCTAGTTAAAATTATGGACCAATGAATGATCGAGAACTGAGGAGACCAGATTGGGGGGAGGCATTTTGACCCTCAGTGAAAGATATTCCACAAGTTAatgttctaatgttttttttttctttctttcttcatttcGTCAAGTTGAGTCATCAGAGATTAATCACCAAAGCAtcccacacagagagaaag
>XM_007231481.3
CTTCCCTCACTCACCGACGCCGCCCGAGTGAGGTTCCCCCCCTGGATCCGGACGGTCGTGTGCGCGGTCCTGTCCtgtcctttcctttccttcaaACAGAAATGTCTGTGAACCTGAGCAAGAACGGCCCTGCCCTCACCGCCGCATATAAAGAGGTGGTGGACGAGAAATCCGACACTAACTGGGCCTTGTTTACTTATGAGGGAAACAGCAATGATATCCGCTTGGCTGAGAAAGGAGatgGTGGATTGGAGGAGCTGGTTGAGGAGCTGAACAGCGGGAAGGTGATGTACGCTTTCTGCCGAGTCCAAGACCCCAACTCAGGCCTCCCCAAATACGTCCTCATCAACTGGACTGGCGAGGGGGTGAAAGATGCTAGGAAAGGACTTTGTGCCAACCATGTTAGCTCAATGGCAAACTTTCTAAAGggAGCACATGTGACCATAAACGCTCGAGCAGAGGAGGATGTGGAGCCTGAGAGCATCATGCAGAAAGTGGCCAAAGCTTCAGGAGCCAACTACAGCTTCCACAAAGAGTCCAACCGCTTCAAAGACTCAGGGCCTCAAGGACCTGTGGGCTCCGTATATCAGAAGACCAACGCCATGTCTGAAATCAAAAGGACAAATAAAGACACGTTCTGGGCTCAGGCTGAGAAAGACGAGGAGAAAAGGCGtcaggaggagaagaaaaaggcAGATGAGGAAAAGCAGaagctggagaaagagagaaaggatcGAGAGGCTAAAGAAACTGCGGTGAGGGACAAAGTGGCCAAAGAGAGAGCCTCGCAGATCGACGAGCAGAAGAGGTACCAGCAGCAGCTCGAGACAGAGAGTCAGAGTCGGAGGAAACAGGAGGCTGCGTCTCTCATCTCCCAGCGCTCTGTTAACCCCAGAGAAATGTTCCAGCAAAGAGAGCGAGGCATCGGCCCCAGCAGCCCAGACAACACCCCATCCAGCCCACAGCCAGgGCGGTTGAAAAGCCCTTTTCTGTTTAAGCAGCCTTGCGAGCCTGAGCCGTTTCGGTCTCCTGTTCGCCGAGTCTCACCTGTAGCAGCTGCAGAGCCCAAAGTTGAGGAGTGTCCCACATCTGATTATGAGGAACCAGAGGGAGCAGCTGATGCAGAGTATGAAGatGTGCAGCCGGTCAGTGATCAGTATAACTCTCATGTGGAGCCGCAGCCAGAGTACGAGACAGTAGCGGAGCCAGAGAATGTTTATGAGGAGCCGCCTCAGgTGGAGCAGCAGAACACATACGAGGACGCTGGAGATCGCGGCGTCTGTGCTCGAGCACTTTATGATTACCAGGCTGCTGATGACACGGAGATCTCTTTCGACCCAGACGATATCATCACTGGCATCGAGATGATCGATGAAGGCTGGTGGCGAGGTTACGCTCCCGATGGTCACTTTGGAATGTTTCCAGCCAATTACGTCGAGCTCGTCTAACCGCAGCAGATCCCTCAAACATATCTGGGCAACAACGACTTGCTCCGCCCAGATCAGTGATTCTAGTTAAAATTATGGACCAATGAATGATCGAGAACTGAGGAGACCAGATTGGGGGGAGGCATTTTGACCCTCAGTGAAAGATATTCCACAAGTTAatgttctaatgttttttttttctttctttcttcatttcGTCAAGTTGAGTCATCAGAGATTAATCACCAAAGCAtcccacacagagagaaag
>XM_007231482.3
TCCCTCACTCACCGACGCCGCCCGAGTGAGGTTCCCCCCCTGGATCCGGACGGTCGTGTGCGCGGTCCTGTCCtgtcctttcctttccttcaaACAGAAATGTCTGTGAACCTGAGCAAGAACGGCCCTGCCCTCACCGCCGCATATAAAGAGGTGGTGGACGAGAAATCCGACACTAACTGGGCCTTGTTTACTTATGAGGGAAACAGCAATGATATCCGCTTGGCTGAGAAAGGAGatgGTGGATTGGAGGAGCTGGTTGAGGAGCTGAACAGCGGGAAGGTGATGTACGCTTTCTGCCGAGTCCAAGACCCCAACTCAGGCCTCCCCAAATACGTCCTCATCAACTGGACTGGCGAGGGGGTGAAAGATGCTAGGAAAGGACTTTGTGCCAACCATGTTAGCTCAATGGCAAACTTTCTAAAGggAGCACATGTGACCATAAACGCTCGAGCAGAGGAGGATGTGGAGCCTGAGAGCATCATGCAGAAAGTGGCCAAAGCTTCAGGAGCCAACTACAGCTTCCACAAAGAGTCCAACCGCTTCAAAGACTCAGGGCCTCAAGGACCTGTGGGCTCCGTATATCAGAAGACCAACGCCATGTCTGAAATCAAAAGGACAAATAAAGACACGTTCTGGGCTCAGGCTGAGAAAGACGAGGAGAAAAGGCGtcaggaggagaagaaaaaggcAGATGAGGAAAAGCAGaagctggagaaagagagaaaggatcGAGAGGCTAAAGAAACTGCGGTGAGGGACAAAGTGGCCAAAGAGAGAGCCTCGCAGATCGACGAGCAGAAGAGGTACCAGCAGCAGCTCGAGACAGAGAGTCAGAGTCGGAGGAAACAGgaggaggaggaggcagcaGCACCACCCAAAAGCTTTAAGCGTGGAGAGTCTGTGGAGAAAGCCAATGAGGCTGCGTCTCTCATCTCCCAGCGCTCTGTTAACCCCAGAGAAATGTTCCAGCAAAGAGAGCGAGGCATCGGCCCCAGCAGCCCAGACAACACCCCATCCAGCCCACAGCCAGAGCCCAAAGTTGAGGAGTGTCCCACATCTGATTATGAGGAACCAGAGGGAGCAGCTGATGCAGAGTATGAAGatGTGCAGCCGGTCAGTGATCAGTATAACTCTCATGTGGAGCCGCAGCCAGAGTACGAGACAGTAGCGGAGCCAGAGAATGTTTATGAGGAGCCGCCTCAGgTGGAGCAGCAGAACACATACGAGGACGCTGGAGATCGCGGCGTCTGTGCTCGAGCACTTTATGATTACCAGGCTGCTGATGACACGGAGATCTCTTTCGACCCAGACGATATCATCACTGGCATCGAGATGATCGATGAAGGCTGGTGGCGAGGTTACGCTCCCGATGGTCACTTTGGAATGTTTCCAGCCAATTACGTCGAGCTCGTCTAACCGCAGCAGATCCCTCAAACATATCTGGGCAACAACGACTTGCTCCGCCCAGATCAGTGATTCTAGTTAAAATTATGGACCAATGAATGATCGAGAACTGAGGAGACCAGATTGGGGGGAGGCATTTTGACCCTCAGTGAAAGATATTCCACAAGTTAatgttctaatgttttttttttctttctttcttcatttcGTCAAGTTGAGTCATCAGAGATTAATCACCAAAGCAtcccacacagagagaaag
>XM_007231483.3
TTCCCTCACTCACCGACGCCGCCCGAGTGAGGTTCCCCCCCTGGATCCGGACGGTCGTGTGCGCGGTCCTGTCCtgtcctttcctttccttcaaACAGAAATGTCTGTGAACCTGAGCAAGAACGGCCCTGCCCTCACCGCCGCATATAAAGAGGTGGTGGACGAGAAATCCGACACTAACTGGGCCTTGTTTACTTATGAGGGAAACAGCAATGATATCCGCTTGGCTGAGAAAGGAGatgGTGGATTGGAGGAGCTGGTTGAGGAGCTGAACAGCGGGAAGGTGATGTACGCTTTCTGCCGAGTCCAAGACCCCAACTCAGGCCTCCCCAAATACGTCCTCATCAACTGGACTGGCGAGGGGGTGAAAGATGCTAGGAAAGGACTTTGTGCCAACCATGTTAGCTCAATGGCAAACTTTCTAAAGggAGCACATGTGACCATAAACGCTCGAGCAGAGGAGGATGTGGAGCCTGAGAGCATCATGCAGAAAGTGGCCAAAGCTTCAGGAGCCAACTACAGCTTCCACAAAGAGTCCAACCGCTTCAAAGACTCAGGGCCTCAAGGACCTGTGGGCTCCGTATATCAGAAGACCAACGCCATGTCTGAAATCAAAAGGACAAATAAAGACACGTTCTGGGCTCAGGCTGAGAAAGACGAGGAGAAAAGGCGtcaggaggagaagaaaaaggcAGATGAGGAAAAGCAGaagctggagaaagagagaaaggatcGAGAGGCTAAAGAAACTGCGGTGAGGGACAAAGTGGCCAAAGAGAGAGCCTCGCAGATCGACGAGCAGAAGAGGTACCAGCAGCAGCTCGAGACAGAGAGTCAGAGTCGGAGGAAACAGgaggaggaggaggcagcaGCACCACCCAAAAGCTTTAAGCGTGGAGAGTCTGTGGAGAAAGCCAATGAGGCTGCGTCTCTCATCTCCCAGCGCTCTGTTAACCCCAGAGAAATGTTCCAGCAAAGAGAGCGAGGCATCGGCCCCAGCAGCCCAGACAACACCCCATCCAGCCCACAGCCAGatGTGCAGCCGGTCAGTGATCAGTATAACTCTCATGTGGAGCCGCAGCCAGAGTACGAGACAGTAGCGGAGCCAGAGAATGTTTATGAGGAGCCGCCTCAGgTGGAGCAGCAGAACACATACGAGGACGCTGGAGATCGCGGCGTCTGTGCTCGAGCACTTTATGATTACCAGGCTGCTGATGACACGGAGATCTCTTTCGACCCAGACGATATCATCACTGGCATCGAGATGATCGATGAAGGCTGGTGGCGAGGTTACGCTCCCGATGGTCACTTTGGAATGTTTCCAGCCAATTACGTCGAGCTCGTCTAACCGCAGCAGATCCCTCAAACATATCTGGGCAACAACGACTTGCTCCGCCCAGATCAGTGATTCTAGTTAAAATTATGGACCAATGAATGATCGAGAACTGAGGAGACCAGATTGGGGGGAGGCATTTTGACCCTCAGTGAAAGATATTCCACAAGTTAatgttctaatgttttttttttctttctttcttcatttcGTCAAGTTGAGTCATCAGAGATTAATCACCAAAGCAtcccacacagagagaaag
>XM_022670534.1
TTCCCTCACTCACCGACGCCGCCCGAGTGAGGTTCCCCCCCTGGATCCGGACGGTCGTGTGCGCGGTCCTGTCCtgtcctttcctttccttcaaACAGAAATGTCTGTGAACCTGAGCAAGAACGGCCCTGCCCTCACCGCCGCATATAAAGAGGTGGTGGACGAGAAATCCGACACTAACTGGGCCTTGTTTACTTATGAGGGAAACAGCAATGATATCCGCTTGGCTGAGAAAGGAGatgGTGGATTGGAGGAGCTGGTTGAGGAGCTGAACAGCGGGAAGGTGATGTACGCTTTCTGCCGAGTCCAAGACCCCAACTCAGGCCTCCCCAAATACGTCCTCATCAACTGGACTGGCGAGGGGGTGAAAGATGCTAGGAAAGGACTTTGTGCCAACCATGTTAGCTCAATGGCAAACTTTCTAAAGggAGCACATGTGACCATAAACGCTCGAGCAGAGGAGGATGTGGAGCCTGAGAGCATCATGCAGAAAGTGGCCAAAGCTTCAGGAGCCAACTACAGCTTCCACAAAGAGTCCAACCGCTTCAAAGACTCAGGGCCTCAAGGACCTGTGGGCTCCGTATATCAGAAGACCAACGCCATGTCTGAAATCAAAAGGACAAATAAAGACACGTTCTGGGCTCAGGCTGAGAAAGACGAGGAGAAAAGGCGtcaggaggagaagaaaaaggcAGATGAGGAAAAGCAGaagctggagaaagagagaaaggatcGAGAGGCTAAAGAAACTGCGGTGAGGGACAAAGTGGCCAAAGAGAGAGCCTCGCAGATCGACGAGCAGAAGAGGTACCAGCAGCAGCTCGAGACAGAGAGTCAGAGTCGGAGGAAACAGgaggaggaggaggcagcaGCACCACCCAAAAGCTTTAAGCGTGGAGAGTCTGTGGAGAAAGCCAATGAGGCTGCGTCTCTCATCTCCCAGCGCTCTGTTAACCCCAGAGAAATGTTCCAGCAAAGAGAGCGAGGCATCGGCCCCAGCAGCCCAGACAACACCCCATCCAGCCCACAGCCAGgGCGGTTGAAAAGCCCTTTTCTGTTTAAGCAGCCTTGCGAGCCTGAGCCGTTTCGGTCTCCTGTTCGCCGAGTCTCACCTGTAGCAGCTGCAGatGTGCAGCCGGTCAGTGATCAGTATAACTCTCATGTGGAGCCGCAGCCAGAGTACGAGACAGTAGCGGAGCCAGAGAATGTTTATGAGGAGCCGCCTCAGgTGGAGCAGCAGAACACATACGAGGACGCTGGAGATCGCGGCGTCTGTGCTCGAGCACTTTATGATTACCAGGCTGCTGATGACACGGAGATCTCTTTCGACCCAGACGATATCATCACTGGCATCGAGATGATCGATGAAGGCTGGTGGCGAGGTTACGCTCCCGATGGTCACTTTGGAATGTTTCCAGCCAATTACGTCGAGCTCGTCTAACCGCAGCAGATCCCTCAAACATATCTGGGCAACAACGACTTGCTCCGCCCAGATCAGTGATTCTAGTTAAAATTATGGACCAATGAATGATCGAGAACTGAGGAGACCAGATTGGGGGGAGGCATTTTGACCCTCAGTGAAAGATATTCCACAAGTTAatgttctaatgttttttttttctttctttcttcatttcGTCAAGTTGAGTCATCAGAGATTAATCACCAAAGCAtcccacacagagagaaag

Function

symbol description
dbnl Enables cadherin binding activity. Predicted to be involved in several processes, including Rac protein signal transduction; nervous system development; and podosome assembly. Located in cytoplasm.

NR:

description
PREDICTED: drebrin-like protein isoform X1

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0003779 actin binding molecular_function

KEGG:

id description
K20520 DBNL, ABP1; drebrin-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231480.3 True 1763 mRNA 0.52 15 34879821 34923018
XM_007231481.3 False 1698 mRNA 0.52 14 34879820 34923018
XM_007231482.3 False 1669 mRNA 0.52 14 34879822 34923018
XM_007231483.3 False 1598 mRNA 0.52 13 34879821 34923018
XM_022670534.1 False 1691 mRNA 0.52 14 34879821 34923018

Neighbor

gene id symbol gene type direction distance location
LOC103022237 ube2d4,UBE2D4,LOC101482088,LOC101172587,LOC108236573,LOC107393720 coding upstream 9524 34848079 ~ 34870296 (+)
LOC103022994 LOC108426650 coding upstream 213822 34639816 ~ 34665998 (+)
LOC103024866 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 coding upstream 346486 34530300 ~ 34533334 (+)
LOC103026546 LOC108266031,LOC107563852 coding upstream 447985 34409348 ~ 34431835 (+)
nr6a1 nr6a1,nr6a1a,LOC107698081,LOC107721088,LOC107753334,LOC107563838 coding upstream 501895 34346593 ~ 34377925 (+)
gins4 gins4,LOC107747805,LOC107698091,LOC107678389,LOC107556221 coding downstream 67808 34990826 ~ 35005720 (+)
LOC103047196 NA coding downstream 92099 35015117 ~ 35018725 (+)
LOC103037259 pi4ka,LOC108440297,LOC107671001 coding downstream 116151 35039169 ~ 35083292 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding downstream 160701 35083719 ~ 35089185 (+)
LOC103034472 NA coding downstream 268786 35191804 ~ 35195665 (+)
G56419 NA non-coding upstream 3175 34874561 ~ 34876645 (+)
G56411 tcf7l1,LOC108426610,LOC108265410,LOC107556226 non-coding upstream 168345 34707496 ~ 34711475 (+)
G56370 NA non-coding upstream 262707 34608634 ~ 34617113 (+)
G56368 NA non-coding upstream 275842 34601453 ~ 34603978 (+)
G56367 NA non-coding upstream 292993 34584172 ~ 34586827 (+)
G56437 NA non-coding downstream 167718 35090736 ~ 35093338 (+)
G56444 NA non-coding downstream 188023 35111041 ~ 35168021 (+)
G56445 NA non-coding downstream 191967 35114985 ~ 35115756 (+)
G56448 NA non-coding downstream 210565 35133583 ~ 35136048 (+)
G56459 NA non-coding downstream 248880 35171898 ~ 35176979 (+)
G56414 tcf7l1,LOC107721095,LOC107556226 other upstream 128257 34713218 ~ 34751563 (+)
fgf17 fgf17,LOC103025711,LOC107698084,LOC107678395,LOC107721084 other upstream 368136 34503114 ~ 34511684 (+)
LOC103037863 adra2b,LOC108440671,LOC108264887,LOC107554404,LOC107753091 other upstream 1239743 33635152 ~ 33640077 (+)
izumo1 NA other upstream 1284002 33564828 ~ 33595818 (+)
G56193 aplnra,LOC108441910,LOC107753098,LOC107712463,LOC107550977,LOC107703172,LOC107554406,LOC107687998 other upstream 1473170 33404574 ~ 33406650 (+)
LOC103047498 NA other downstream 38782 34961800 ~ 34989285 (+)
ikbkb ikbkb,vdac3,LOC107560056,LOC107671013,LOC107754399 other downstream 303467 35226485 ~ 35272528 (+)
LOC103032256 dynll1,LOC103397138,LOC107554284,LOC107559583,LOC100698873 other downstream 353061 35276079 ~ 35284271 (+)
G56504 NA other downstream 497700 35420718 ~ 35458877 (+)
G56701 pola2,LOC107710902,LOC107657899 other downstream 1033086 35956104 ~ 35964510 (+)

Expression


Co-expression Network