adipor1 (adipor1,adipor1b,LOC108425077,LOC107751445,LOC107679819)


Basic Information

Item Value
gene id adipor1
gene name adipor1,adipor1b,LOC108425077,LOC107751445,LOC107679819
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 2465593 ~ 2474573 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231678.3
ACCTGTGCAACTGGATTCTCGGATCGGAGCCTCGGACTGGAGCTGTATCTGTAGTAGAGTAGATAGccacgttagctagctaaataacaGCTTACAAGCTGAATATCACAGTTTTGAGAAAGAtagtaagatagatagatagctgaACTTATTGGTAAGCCTTAGATTCAGCTGAAAGaagcattttaaacatacattttattgtttttacttcTGAAATCGACATAGAGCAGCTCCACTTCCTCAACACTGCGCAGAGAGGCAAGCTAAGGACAGGTAGCTTAGCTTATGCTCAAGTTTACGGCTTTATTTCGCAGGAATTGCCGCTAAAACCTGGTTCGTCCAGCTGTCAAACACCTTAAACAGGAGTTCAGGACTTTGACTGTGATCTGAGGGGCAAGGCGGGGCCTGTGGGGAGCTGTAGGTTCTCCCCATGACATCGCGGCATCATGCCAACAGCGGCTCCACCAGCGATGCCGAGTGGCGGGTTTCTGAGGAGGACGAGGGGGACGTGGAGCTCGCTGAGCTGGGGCCGTTGCTGACCGCTCCTGAGTCTGAACccaggGGTGCAAGAGCATTCCCAGATAcagatggtgatgatggtgatgatgacagTGATGATAATGGAGAGAACTGTGGCCTGCGGGTCGTCACACTGCCCCTGCAGGCTCACCATGCCATGGAGAAGATGGAGGAGTTTGTGCACAAGGTGTGGGAGGGGCGTTGGCGAGTGATCCCGTACCAGCTGCttcctgattggctgaaagaTAACGACTATCTGCTTCACGGCCACCGGCCGCCCATGCCATCATTCAGAGCCTGCTTCGGGAGCATCTTCAGGATCCACACTGAAACAGGGAACATCTGGTCACATATGCTTGGTCTGATTTTGTTCCTGTTTCTGGGCACCCTGACCATGCTGCGGCCCAACGTGTCCTTCATGGCTCCTCTGCAGGAGAAGGTGGTGTTTGGGATGTTTTTCCTGGGTGCGGTGCTCTGTCTCTGCTTCTCCTGGCTCTTCCACACAGTCTACTGCCACTCGGAGAAAGTCTCCAGAACGTTCTCAAAgttggATTACTCTGGAATAGCGTTGCTGATAATGGGCTCGTTTGTTCCGTGGCTCTATTACTCCTTCTACTGTTCCCCACAACCACGGCTCATCTACCtctctgtggtgtgtgtgttgggcatCTCTGCCATTATTGTGGCACAGTGGGACCGTTTCGCCACGCCGCGCCACCGGCCTACACgtgcagGTGTGTTTCTTGGCCTGGGGCTGAGCGGCGTCATTCCCACAATGCACTTCACCATCGCTGAGGGCTTTGTGAAGGCCACCACAGTGGGCCAGATGGGCTGGTTCATCCTGATGGGCGCCATGTACATAACTGGAGCTGGACTCTACGCTGCACGCATCCCTGAACGCTTCTTCCCTGGCAAATGTGACATCTGGTTTCAATCCCATCAGATATTCCATGTACTGGTTGTGGCTGCAGCATTCATCCACTTCTACGGCATCTCCAACCTGCAGGAGTTCCGCTACGGTCTGGGAGGCGGCTGCACCGACGATTCCCTGCTCTAAAATAACTCCGTTCCCCTGTCTCCTCGATCCAGCTGTGGCTCCCCTGAATCAGCCACAGCTGGGAAAGAGCCATCGACCACCAGACCAGCCGCCGACCACACACTGAACCATGATCAAATATTAATTCTTTTAAATTATTCTAGTGAATAAGTTATAAAGTTTGTAAAGTGATTTACAGAGTATTTAAGCCCTTTCACACTTTTTCAcgcatttttttttggtcagacgCGAATAACAAAACTCCACAGCTCTTGATAAATGTCCAcgatttctgtttctctgctcctTGTCCACTTTTGCATAATTAACTCCTCCACACAAGTGCTCATTAACGAGGGGAGCATTTAGTAAAGTTCTCTTCTTTTGTAgacttaaaaatactttttaaactttaaattactCCTCCTGTAATGTGTGTAAATTGTCTGTAAAGATCTCGCCATCATTCCCCAGCCTTTCATCTTCAAACCACCACATCGATCGAGTATAagattctatttttttctgattttgatttgatttatttagtgCTCAGCATCACAGTCAGTCAATTTCTGACATCATTATTATCtgtgtattcattttaaaacctTGTCATTTACCTGTAAAAATTAGACTGTGTGTGAAAGGGCCTTTACAGAACATAATTACTTGAAAATTGTGATTTATAAAAAATCTCAGAACTCAGTTAAATGAGAAATCTTGtataaaatggacttgggttgtagtgaaacatgatgacgagtacaaacttttgttgaatagccctccTCCGTCCACCACCAGTATttaaaatacagcgcttttagccaaTTCTCCCAAAGGGCTTACAATGCTAATGACGGGGGCATAGAGTAACCCATACAAAAAAATGGtcatttttacactattaacaagctgaaagtagctccacatttcATTGCTAGAATTCTGAGgatcctgatatttaaaacgaggcactgagagaTTTAAAAGTGCaaagatagtttattaaaaacactgtttatacaaacAGTACCTCAATAAGTCGACTTATGAGATGAAGCGAATGGATAGGACAGATGAACAGATAATTTGAGGTAAATTGAGGGCTTTTAGTGTAGTTATGCTTCTTCATGGAACATAGAAGACTCAGACGCTCCTAgacttaaaaatactttttaaatgtaaaatgactACTCCATAAAGTGTCTGTCAAAATTTCTCGTCATAATTCCCCAGCCTTTCGGCTCCAAACCGCCACATACTTACACATACTTACTTCtgattctgatatttttttatttagtgctcACCATCACAGTCAGTCAGtttcagtcattttttaaaacttgacATTTACTTGTAAAAATCAAACTGTGTGTGAATGAGGCTTTACAGAACATGATTACTTAAAAATTGTGATTCATAAAAAATGTCAGAGCTCAG

Function

symbol description
adipor1b Predicted to enable signaling receptor activity. Acts upstream of or within retinal rod cell development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including EVL; brain; fat cell; head; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in breast cancer; macular degeneration; and prostate adenocarcinoma. Orthologous to human ADIPOR1 (adiponectin receptor 1).
adipor1 Enables adipokinetic hormone receptor activity; adiponectin binding activity; and protein kinase binding activity. Involved in several processes, including adiponectin-activated signaling pathway; negative regulation of epithelial cell migration; and negative regulation of signal transduction. Located in plasma membrane. Is intrinsic component of plasma membrane. Implicated in breast cancer; macular degeneration; and prostate adenocarcinoma. Biomarker of obesity.

NR:

description
PREDICTED: adiponectin receptor protein 1-like

GO:

id name namespace
GO:0033211 adiponectin-activated signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0042562 hormone binding molecular_function

KEGG:

id description
K07297 ADIPOR; adiponectin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231678.3 True 3007 mRNA 0.45 8 2465593 2474573

Neighbor

gene id symbol gene type direction distance location
LOC103028158 cebpb,LOC103028158,LOC107556312,LOC107669676,LOC107751442,LOC108265421 coding upstream 103369 2359922 ~ 2362224 (+)
LOC103045867 mc3r,LOC103045867,LOC108425022,LOC107751459,LOC107711834,LOC107680356,LOC107669608 coding upstream 464423 1999574 ~ 2001170 (+)
LOC103027674 LOC108425035 coding upstream 679231 1772919 ~ 1786362 (+)
pym1 pym1,LOC102777374 coding upstream 701518 1760812 ~ 1764075 (+)
LOC103041629 sema3b,LOC107717529,LOC107556489,LOC107669651 coding upstream 1003895 1415274 ~ 1461698 (+)
klhl12 klhl12 coding downstream 4018 2478591 ~ 2506196 (+)
LOC103031418 tuba8l,LOC106567204,LOC105022333,LOC106572477,LOC103031418,LOC108265838,LOC108425079,LOC107711852,LOC107679810,LOC107594520 coding downstream 35571 2510144 ~ 2521419 (+)
LOC103026437 LOC108425081 coding downstream 52896 2527469 ~ 2583319 (+)
LOC103035089 NA coding downstream 109972 2584545 ~ 2597636 (+)
LOC103037045 NA coding downstream 124669 2599242 ~ 2602614 (+)
G49117 NA non-coding upstream 35950 2428120 ~ 2429643 (+)
G49122 NA non-coding upstream 37682 2425130 ~ 2427911 (+)
G49121 NA non-coding upstream 60865 2404515 ~ 2404728 (+)
G49120 NA non-coding upstream 62616 2402683 ~ 2402977 (+)
G49119 NA non-coding upstream 66764 2398482 ~ 2398829 (+)
G49146 NA non-coding downstream 182623 2657196 ~ 3150588 (+)
G49150 NA non-coding downstream 196244 2670817 ~ 2672813 (+)
G49151 NA non-coding downstream 206625 2681198 ~ 2681503 (+)
G49154 NA non-coding downstream 232450 2707023 ~ 2709154 (+)
LOC103026017 NA non-coding downstream 234131 2708704 ~ 2724228 (+)
G48714 NA other upstream 1654328 808155 ~ 811265 (+)
faf1 faf1,LOC107743872 other downstream 508273 2982846 ~ 3152050 (+)
spata6 dnttip2,LOC107700367,LOC107603264,LOC107757995,LOC102796155 other downstream 1725366 4199939 ~ 4239873 (+)
G49475 NA other downstream 1769955 4244528 ~ 4246227 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 3144586 5619159 ~ 5627452 (+)
LOC103023397 NA other downstream 3302479 5777052 ~ 5789265 (+)

Expression


Co-expression Network