LOC103022582 (adora1b,LOC103022582,LOC108414989,LOC107711940,LOC107680252,LOC107591868,LOC107550463,LOC105912002)


Basic Information

Item Value
gene id LOC103022582
gene name adora1b,LOC103022582,LOC108414989,LOC107711940,LOC107680252,LOC107591868,LOC107550463,LOC105912002
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 5891651 ~ 5912340 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231928.3
ATTATCAAACCCATCATATCTTTGAGGTTTCCTACTACTAGATTGCAGAACCAGTAAGaaccaataaaaaacagcaagaaCCAGTAAAACCAATAAGAATACTTTATGTTACTAATGATATACACTGACTAACCTAATGGAAATGGACCTGGAACTCTTAGAGCATCACTCAATATTATCAAACCCATCCTCTTTTTGAAGTTTCCTACTACTGGATTGCAGAACCAGTAAGAACCAATAAAAACCAGTAGGAACCAGTGAGAATGCCTGAAGCCCTGTCCCCATCCCAAGCCCTCTACATGGGCATGGAAGTGGTGATCGCAGTGTCCTCAGTGCTGGGTAATGTGATGGTGGTGTGGGCAGTGAAGATCAGCAGATCTTTGAGGGACACCACCTTCTGCTTTATAGTGTCTCTGGCTGTGGCCGACATCGCAGTGGGAGCACTGGTCATCCCCCTGGCCATCACTATCAGCATCGGGCTCCAGACCCACTTCTACAGCTGCTTACTGGTGGCGTGCACCGTGCTGGTCCTCACCCAGAGCTCCATCCTCGCGCTGCTGGCCATCGCTATTGATCGATACCTGAGGGTCAAGATTCCAACCAGCTACAAGCGAGTGGTCACTCCCAGGCGAGCCGGATTAGCAGTGGTCGTGTGCTGGACGGTGGCCTTCATAGTCGGGCTGACTCCGATGCTGGGCTGGAACAATTTACACAACCTGCAACGAAGGAACGGCTCGCTCGGCCCGGACCTCATCATCACCTGCCAGTTTGAAAATGTCATCAGCATGGAATACATGGTTTACTTCAACTTCTTCGGCTGGGTTCTTCCtccactgctgctgatgctggctATTTACGCCGAGATCTTCATCATGATCCACAAGCAGCTGAACAAGAAGGTCACCACCAGCCACACCGACCCCAACAAGTACTACGACAAGGAGCTGAAGCTGGCCAAGTCGCTCGCTCTCGTCCTCTTCCTGTTCGCCGTCAGCTGGCTCCCGCTGCACATCCTGAACTGCATCACCCTGTTCTGCCCGAACTGCGAGAAGCCCATGTTCCTCATCTACATCGCCATCCTGCTCACTCACGGCAACTCGGCCGTCAACCCCATCATCTACGCCTTCCGCATCAAGAAGTTCCGCATGGCGTTCCACCGGATCTGGAAGCAGTACTTCTGCTGCAAGGAGGCTCCGCCCATCGAGACGCAGTTGAGCGAAAGACTAGACAAGGACCACTTTGGCCCTCAGCCCATACCTGCAATGGAGCACAATAACATTTGACATTGGAGCACCAGGGGAACTCAACTCACCGAGCAGGCGGCTGAATACATTGGCCACTCTTAGCGACATATTAGTGTCTATTTGAATGTAAATCGGCGCACCGTCTGCACAGGCCATTGACTGCAGTCGTCAGAGCGCAGAGTCCCATTACAGGAGGATTATGAAACATTATCACTCCACCAGGAGTCAAAGTAGAGCGAGACCAGACAGTGAAATTAAATCATAAAGAGAAGGGAATCTGAGATACGGCATACTGGAAATGAGACTTTCTGAATTGGATACTTGTGGAAATGTTTACTCCATCAAAGGCTTCTGTGGTAAAACCACAGGGAACCGTAGCTAGCCTACAGGTCCAGCATCACTCGAGTTATTCAGAAATCCAAAATGTGCAATACCCTCGTCTCAAATGGTGCATCATCTGAAATCATCCTTTCGAAATGTTCTCGACGCTATGAATTTCAATTTTTACTACTAGTAAGAGTACGGTtcctgaaagaaagaaaaagtatgAATGTAATACAGAATACACTGAGGATAAACtggttataaaatgttataaaatgataATCAATCAGTTCCTGAACCTACTTCCAATAAGTCCATGAGGGAAGATGTTGAAGGGGTTCAATGAGAGAATagaatattgatttaaaaaaaggcagGAAGGTCTCTGTAGAGTTTAATCTTCAATTCTTTAAAGCTCAGCATATTTGAGCTGAcccagctatatatatatatttaaacaataatatttctgtaaaaatacaattatttatttaagggcTGCACAATCAGGTAATAATCATGTCTGTTAATTGAATTACCTCAAATTTATGTTGCattgataaaaaaatggaaTGTCAATGTAACAATGAATGATTGACTAAAATCAAAACATGtatacttatttattaatatgcCTACAAGGGGTGTCACAGGTTCAACAGAGGATTAAAACAATCTTTAATGGAACATTTACAACAGTGTagcaaaataaaggtaaaaCTGTAGCACTGATGTAACTCTCCTCAGgatgtactcacactaggccaTCTGTACCATGCCTAAAGACATTTCCTCGAGAGCCTGATTCAGTTAACCATGTGATGGCTTCGTACCATGCCTGAGCTTCACCCAACCCCACCTCATTAAATGGTTAAGATGCACTCGCTATTCGTTAGCGGCCACTCCTGTTAGCAACCAAAGCCTAGTTTGTTTGATTAGTGTGCTACACGAGCCGTGCCCGAGCCCAACTTGCTAACTGTTAGCAGCCTCTTCTGTTAGCAATTATTTTCCCCAATGCCTGAGCATGGTACAGTGAACCATGCCTAAACCTAACTCTTTTCAACTGGGCACGGTAGACATAATCATAATGTGATTGCTAAGTATGTCCGCTAACTGTTAGCACCAAATAACCATTACCCACAGTAGACTATATAGACTAGTGTATTTATACTATACAGActagtataaaaaatatgtgcCCATTAAAGTAAAGTGAGCCATAGGTGGGCTCAggctagagcttagatcgggctcAAAATATCCAGCCCGAGTCCATGTatgttctgcccaagcccgacccAATCCGCCCCATACGCTGTCATTTTGAGCCCGAGTCCGATTTAAACACgacattttttttagaagagtGTTAAAACGtatcttttaaaaaacattttcaggctgtttgaatgagcgaaatcggttcagaatgatgtaaatttacattgcaacactgaagaagacctgttattaaagaaaaatgtttatgaaGAACAGGTAtccaaaagattaaaacacaaacgATGCGAACAATGATCCAACACCTGTAAgttaggctacaagaatgatgtctgaataacttttctctaatctaatataatttaacatggtttaagaatagcacatttctaaacaaacaatttttttatattgagcttatagtctaagtgcaaaaccacaaaaaaagtGTGCACTGCGCACTT

Function

symbol description
adora1b Predicted to enable G protein-coupled adenosine receptor activity. Predicted to act upstream of or within G protein-coupled adenosine receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in brain. Human ortholog(s) of this gene implicated in asthma. Orthologous to human ADORA1 (adenosine A1 receptor).

NR:

description
adenosine receptor A1-like

GO:

id name namespace
GO:0001973 G protein-coupled adenosine receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001609 G protein-coupled adenosine receptor activity molecular_function

KEGG:

id description
K04265 ADORA1; adenosine receptor A1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231928.3 True 3271 mRNA 0.44 2 5891651 5912340

Neighbor

gene id symbol gene type direction distance location
LOC111192754 NA coding upstream 109964 5770016 ~ 5781687 (+)
LOC103025805 pepa,LOC108442134,LOC108414658,LOC108265567 coding upstream 235965 5633087 ~ 5655686 (+)
rbm15 rbm15,LOC107731203,LOC107680058 coding upstream 362587 5523809 ~ 5529064 (+)
alx3 alx3 coding upstream 377980 5496669 ~ 5513671 (+)
kcnc4 kcnc4 coding upstream 573203 5274656 ~ 5318448 (+)
dclre1b NA coding downstream 6834 5919174 ~ 5927170 (+)
lhfpl5 lhfpl5,lhfpl5b,LOC107591869,LOC107745833 coding downstream 333889 6246229 ~ 6250603 (+)
LOC103046376 LOC103046376 coding downstream 437802 6350142 ~ 6354308 (+)
LOC103046076 LOC103046076,LOC108442386 coding downstream 446155 6358495 ~ 6371015 (+)
LOC103037089 LOC108442388,LOC105023850 coding downstream 480484 6392824 ~ 6400833 (+)
G49942 NA non-coding upstream 66480 5824615 ~ 5825171 (+)
G49941 NA non-coding upstream 72368 5818963 ~ 5819283 (+)
G49915 NA non-coding upstream 173391 5705699 ~ 5718260 (+)
G49901 NA non-coding upstream 224993 5665939 ~ 5666658 (+)
G49868 NA non-coding upstream 285051 5606003 ~ 5606600 (+)
G49980 NA non-coding downstream 15065 5927405 ~ 5930023 (+)
G49982 NA non-coding downstream 16136 5928476 ~ 5929255 (+)
G50009 NA non-coding downstream 235110 6147450 ~ 6148423 (+)
G50012 NA non-coding downstream 240237 6152577 ~ 6155022 (+)
G50025 NA non-coding downstream 267452 6179792 ~ 6251881 (+)
LOC103023397 NA other upstream 102386 5777052 ~ 5789265 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 264199 5619159 ~ 5627452 (+)
G49475 NA other upstream 1645424 4244528 ~ 4246227 (+)
spata6 dnttip2,LOC107700367,LOC107603264,LOC107757995,LOC102796155 other upstream 1651778 4199939 ~ 4239873 (+)
faf1 faf1,LOC107743872 other upstream 2739601 2982846 ~ 3152050 (+)
G50063 NA other downstream 459180 6371520 ~ 6376705 (+)
LOC103039117 nol4la,LOC103039117,LOC108412512,LOC108265968,LOC107680239,LOC107550513,LOC107731219,LOC107745834,LOC107549982 other downstream 951016 6863356 ~ 6941978 (+)
trnae-cuc NA other downstream 1071850 6984190 ~ 6984261 (+)
c6h9orf3 NA other downstream 1818344 7730684 ~ 7884058 (+)
G50568 NA other downstream 2295002 8207342 ~ 8221162 (+)

Expression


Co-expression Network