LOC103026255 (elovl8b,LOC103026255,LOC108442366,LOC107657928,LOC108265939,LOC107585829,LOC107699894)


Basic Information

Item Value
gene id LOC103026255
gene name elovl8b,LOC103026255,LOC108442366,LOC107657928,LOC108265939,LOC107585829,LOC107699894
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 13741708 ~ 13750155 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007236123.3
gagagagagaatgtgataAGAGTGTCCACATTTGGTTCAAAGTCTTAGGACAGTAAGTTACTGGAGTTCAGAACCGGAGAGGAAGCCGGAGTGAAGTGGGTTTAGTTCTGTTTCAGTGTTCTCGATGGCGTCAGCATGGCAGAGATTCGAATCCATGCACCAGTGGATTCTGGAAAATGGAGaTAAGAGGACAGACCCCTGGTTGCTGGTGTACTCCCCCGTGCCTGTAGCATGTATTTTTCTCTGTTATCTTGGTGTGCTTTGGATCGGACCCAAGCTCATGAAGAACAGAGAACCCTTAAACCTAAGAGTCGTCCTAATAGTTTATAACTTTGCCATGGTTTGCCTGTCCGTCTACATGTTCCACGAGTTTTTAGTGACGTCTTGGTTGTCAAACTACAGCTACCTGTGTCAGCCTGTGGACTACAGCACCAGTCCTTTAGCTATGAGGatggCCAGTGTGTGCTGGTGGTTTTTCTTCTCCAAGGTCATAGAGCTTGTTGACACAgtcttttttattttacggaAGAAGAACAGTCAGCTGACCTTCCTGCACATATACCACCACGGCACCATGATCTTCAACTGGTGGGCTGGGGTCAAATATGTAGCCGGCGGACAGTcGTTCTTCATCGGGCTGCTGAACACCTTTGTGCACATTGTGATGTATTCGTATTATGGGCTGGCGGCTCTGGGGCCTCACATGCAGAAGTATCTGTGGTGGAAACGCTACCTCACCTCCCTGCAGCTGctccagtTTGTCCtgctcaccacacacactggtTATAACCTGTTCACCGAGTGTGATTTCCCCGACTCCATGAACACGGTGGTGTTCGCCTACTGCATCACCCTCATCCTGCTCTTCAGCAACTTCTACTACCAGAGCTACATCAGCCGGAAGAGCAAACGCTCCTAACAGACCGGAACAGTCCCTGACCGTCCCAAATCGACCCCTCCACACTTCCTCTCAACACTTCTGCACAGGGACCAACGTCTGTGGATCTGCGGAAACAGTGAATTTACACACATCACCAAAAATTAAAGTTGCACTCAGAAAGAattaaccaatagaaatgacACTTGGTGGGTGATAAGTCccacttttgtcttggtggataTGACCAATGAATCCATGTGTGGAGCCACCACGATCAGCACCAAGATCAACGGTTTGCTGTAGTTTGTCACACATCCACAGGGTTCTGGTGTCATTATGTGAGGTGCACTTTCATACAATGCCAGCTCTTCATTACCGGAACTTTAACAGCGCTGAGTTacgttaatgaggtcctgcaaccagtgaaCCTTCCatttctgaacacacactctgGTGCTCGATTCCAGCAGGACagtgctcgtccacatactgcacaGACACTGTACCATGGCCAGTTGCATCACTAGACCGACCTATCCCAAATACAAaatgttttgagatgctattggatatgtatgtttgtgtagctcaataaatatgatcaGGGGTTATGAACCCATAATCATCTTAAAAGTCTTAACATTTCATCtcccacacttccttctgggtgtaACTACTTTTGCAACCAAAGCCATTAGTACCACAGTTACAGCGACGGCCAATCATTCTGTTCTTTATTGGCGagtagaaatgtttaaaaatgaattaacatTTTGGATACAGGAGTTTTGTGTCACAGTGTGACTGTATGGGTGTTTCAGCAAAAgcaatatgaacctgttttattttctatggctttaaatttgggagaaacaatGAAGGTGTAAAAATCTTGTATCTGCATTTTTGCCATTATTGATTGATcttctatcatttttttttaatgatgaatagatcaaaagaaatgtttaaaacgACTTGCAATAAAACAGACCTTGGATTTACATTGAC
>XM_007236124.3
atgtgataAGAGTGTCCACATTTGGTTCAAAGTCTTAGGACAGTAAGTTACTGGAGTTCAGAACCGGAGAGGAAGCCGGAGTGAAGTGGGTTTAGTGTTCTCGATGGCGTCAGCATGGCAGAGATTCGAATCCATGCACCAGTGGATTCTGGAAAATGGAGaTAAGAGGACAGACCCCTGGTTGCTGGTGTACTCCCCCGTGCCTGTAGCATGTATTTTTCTCTGTTATCTTGGTGTGCTTTGGATCGGACCCAAGCTCATGAAGAACAGAGAACCCTTAAACCTAAGAGTCGTCCTAATAGTTTATAACTTTGCCATGGTTTGCCTGTCCGTCTACATGTTCCACGAGTTTTTAGTGACGTCTTGGTTGTCAAACTACAGCTACCTGTGTCAGCCTGTGGACTACAGCACCAGTCCTTTAGCTATGAGGatggCCAGTGTGTGCTGGTGGTTTTTCTTCTCCAAGGTCATAGAGCTTGTTGACACAgtcttttttattttacggaAGAAGAACAGTCAGCTGACCTTCCTGCACATATACCACCACGGCACCATGATCTTCAACTGGTGGGCTGGGGTCAAATATGTAGCCGGCGGACAGTcGTTCTTCATCGGGCTGCTGAACACCTTTGTGCACATTGTGATGTATTCGTATTATGGGCTGGCGGCTCTGGGGCCTCACATGCAGAAGTATCTGTGGTGGAAACGCTACCTCACCTCCCTGCAGCTGctccagtTTGTCCtgctcaccacacacactggtTATAACCTGTTCACCGAGTGTGATTTCCCCGACTCCATGAACACGGTGGTGTTCGCCTACTGCATCACCCTCATCCTGCTCTTCAGCAACTTCTACTACCAGAGCTACATCAGCCGGAAGAGCAAACGCTCCTAACAGACCGGAACAGTCCCTGACCGTCCCAAATCGACCCCTCCACACTTCCTCTCAACACTTCTGCACAGGGACCAACGTCTGTGGATCTGCGGAAACAGTGAATTTACACACATCACCAAAAATTAAAGTTGCACTCAGAAAGAattaaccaatagaaatgacACTTGGTGGGTGATAAGTCccacttttgtcttggtggataTGACCAATGAATCCATGTGTGGAGCCACCACGATCAGCACCAAGATCAACGGTTTGCTGTAGTTTGTCACACATCCACAGGGTTCTGGTGTCATTATGTGAGGTGCACTTTCATACAATGCCAGCTCTTCATTACCGGAACTTTAACAGCGCTGAGTTacgttaatgaggtcctgcaaccagtgaaCCTTCCatttctgaacacacactctgGTGCTCGATTCCAGCAGGACagtgctcgtccacatactgcacaGACACTGTACCATGGCCAGTTGCATCACTAGACCGACCTATCCCAAATACAAaatgttttgagatgctattggatatgtatgtttgtgtagctcaataaatatgatcaGGGGTTATGAACCCATAATCATCTTAAAAGTCTTAACATTTCATCtcccacacttccttctgggtgtaACTACTTTTGCAACCAAAGCCATTAGTACCACAGTTACAGCGACGGCCAATCATTCTGTTCTTTATTGGCGagtagaaatgtttaaaaatgaattaacatTTTGGATACAGGAGTTTTGTGTCACAGTGTGACTGTATGGGTGTTTCAGCAAAAgcaatatgaacctgttttattttctatggctttaaatttgggagaaacaatGAAGGTGTAAAAATCTTGTATCTGCATTTTTGCCATTATTGATTGATcttctatcatttttttttaatgatgaatagatcaaaagaaatgtttaaaacgACTTGCAATAAAACAGACCTTGGATTTACATTGAC

Function

symbol description
elovl8b Predicted to enable fatty acid elongase activity. Predicted to be involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Predicted to act upstream of or within fatty acid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane.

NR:

description
elongation of very long chain fatty acids protein 4-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007236123.3 True 1891 mRNA 0.45 8 13741708 13750155
XM_007236124.3 False 1870 mRNA 0.45 8 13741708 13750145

Neighbor

gene id symbol gene type direction distance location
dio1 dio1 coding downstream 143900 13594155 ~ 13597808 (-)
LOC103030626 LOC108439397,LOC107710923,LOC107548485,LOC107585821,LOC107657911 coding downstream 178220 13545691 ~ 13563488 (-)
fpgt NA coding downstream 208475 13528757 ~ 13533233 (-)
LOC103033588 tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107699804,LOC107710912 coding downstream 214828 13499464 ~ 13526880 (-)
LOC103033893 NA coding downstream 274447 13460464 ~ 13467261 (-)
mutyh mutyh,LOC103399401 coding upstream 1444 13751599 ~ 13759781 (-)
c6h1orf228 NA coding upstream 10514 13760669 ~ 13768994 (-)
LOC103024702 guk1b,LOC103024702,LOC107585833,LOC107758268,LOC107657930,LOC107750510,LOC108442369,LOC105895130,LOC105895024 coding upstream 20006 13770161 ~ 13785329 (-)
LOC103027869 LOC108442365 coding upstream 40378 13790533 ~ 13854271 (-)
dmap1 dmap1,LOC107750524,LOC107758267,LOC107585836,LOC107699933,LOC107548533 coding upstream 152060 13902215 ~ 13911291 (-)
G51958 NA non-coding downstream 101589 13639888 ~ 13640119 (-)
G51941 NA non-coding downstream 251509 13487919 ~ 13490199 (-)
G51932 NA non-coding downstream 307163 13433901 ~ 13434545 (-)
G51842 NA non-coding downstream 339465 13367425 ~ 13402243 (-)
G51919 NA non-coding downstream 374873 13364816 ~ 13366835 (-)
G51992 NA non-coding upstream 129244 13879399 ~ 13885559 (-)
G52024 NA non-coding upstream 262218 14012373 ~ 14014008 (-)
LOC111192619 LOC108442363 non-coding upstream 288185 14038340 ~ 14063185 (-)
G52064 NA non-coding upstream 348856 14099011 ~ 14100478 (-)
G52127 NA non-coding upstream 409621 14159776 ~ 14160951 (-)
G51960 glis1 other downstream 77594 13663401 ~ 13664114 (-)
LOC111192615 ssbp3b,LOC108439398,LOC108265320,LOC107585824,LOC107699856,LOC107710925,LOC107657912 other downstream 148761 13565998 ~ 13592947 (-)
smim24 NA other downstream 418025 13285303 ~ 13323683 (-)
LOC103042573 cunh1orf21,zgc:92140,LOC107676598,LOC107585858,LOC107750760,LOC107700167 other downstream 1859767 11831802 ~ 11881941 (-)
G51346 NA other downstream 2537285 11204054 ~ 11204423 (-)
G52161 NA other upstream 658781 14408936 ~ 14411611 (-)
G52299 NA other upstream 1326141 15076296 ~ 15084568 (-)
LOC103028883 LOC108430093 other upstream 2411485 16161640 ~ 16219847 (-)
G52493 NA other upstream 2432580 16182735 ~ 16185312 (-)
G52503 polr2a other upstream 2476081 16226236 ~ 16227174 (-)

Expression


Co-expression Network