LOC103038409 (LOC103038409,LOC108411948,LOC107724878,LOC107667523,LOC107689282,LOC107711839,LOC107602832,LOC107600045)


Basic Information

Item Value
gene id LOC103038409
gene name LOC103038409,LOC108411948,LOC107724878,LOC107667523,LOC107689282,LOC107711839,LOC107602832,LOC107600045
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 47927955 ~ 47933611 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007237001.3
TCTCATTCTTTTGGAGAAAGTAGTAGCTTGTGTAACAATGGCACTGGAGCTGTATCTTGACCTGCACTCTCAGCCTTGTCGTTCTGTCTACATCTTTGCCAAGCTAGCGAACATTCCTTTTGAATTCAAAGCCGTGGACCTCTCTTCAGGTGAAAACTATGGTGAAGGCTTTGGAAAGGTCAGCATTTTAAGAAAAGTGCCCGTCCTTAAAGATGAAGCTTTTATCCTCACAGAAAGCACGGCGATCCTGCAGTACCTGGCAAAGAAGTATTCCACTCCAGACCACTGGTATCCCGCTGACATGCAGAAGCGCGCTCGGGTTGATGAGTATCTTTCTTGGCAACATACCAACATAAGGCCCCACGGCTCAAAGGTCTTTTGGTTCAGGGGTGTCTTGCCAGTGGTCACTGGAGCTCCAGTTCCAAAAGAGAAGATGGATTCTGCAATGGAAGACCTGAATACATCCCTTAAGCTGTTTGAGGAGAAGTTCCTACAGGATAAGCCTTTCATAATTGGAGACCAGATCTCTCTGGCTGATCTGGTAGCCATAGTGGAGGTCATGCAGcCGTTCGGAACAGGCTTGGATGTGTTTGAGGGCAGGCCGACTCTAAAAGCGTGGATGGACAGAGTAAAGAAGGAGATTGGAGTGGAACTGTTCGACGAGGCCCATAACATTATCATGAATGTGGCCTTACTTCCACAGACCTTTGAGAACAAAGGTTTACCAGATGCTCTTAAGATGCGGATCATGAAAATGTTCAACTGATGTTCCATCTGCCATCTTTCTGAATTGTCTACAGAACTCTTTTGGAAAAGAAACGTCCATGCCCCCTTATGCTTTCTGGTGCAAATTCACTGGCACTATTTCTTAAAGCCATATTTCATCAGTCTGACCCCTCTCTGCTCATCAGTGAAGTTTCTGTTATGGAAAGAAGGAAGCAGTATGCATACAATTTGCAGATTCGTATCTGCCTCACAGTAAGAATAAACTACAGACTTTTAACACATAGGCTTGTCTTAAGAACATTATACATCCATACATTTCACCACATAAGCTTAATTAGTAAACTATGAGCTCTGTATCTAAATCTGTATTGGAAATAAATATCATGCAAAACTGTTATGCTTTGGATAAAA

Function

NR:

description
glutathione S-transferase theta-1-like

GO: NA

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007237001.3 True 1137 mRNA 0.43 5 47927955 47933611

Neighbor

gene id symbol gene type direction distance location
il17rb NA coding upstream 34000 47880396 ~ 47893955 (+)
cacna1d cacna1d coding upstream 71423 47711376 ~ 47856532 (+)
LOC103044878 NA coding upstream 255658 47664880 ~ 47672297 (+)
cfap74 NA coding upstream 334628 47497614 ~ 47593327 (+)
LOC103040284 LOC108412055,LOC108265574,LOC105899021 coding upstream 729705 47196661 ~ 47198250 (+)
cacna2d3 cacna2d3 coding downstream 64482 47998093 ~ 48418212 (+)
cep350 NA coding downstream 1269657 49203268 ~ 49268872 (+)
LOC103029228 NA coding downstream 1339383 49272994 ~ 49308775 (+)
LOC103028608 xpr1a,xpr1,LOC107755298,LOC107758009,LOC107699288,LOC107665065,LOC107603171 coding downstream 1536821 49470432 ~ 49539741 (+)
sin3b sin3b,LOC106613916 coding downstream 1615033 49548644 ~ 49568835 (+)
G59603 NA non-coding upstream 6908 47920308 ~ 47921047 (+)
G59597 selenok,selk,LOC107750820,LOC107693600,LOC107594974 non-coding upstream 8621 47912516 ~ 47919334 (+)
G59555 gbrd,gabrd,LOC106566882 non-coding upstream 416533 47467704 ~ 47511422 (+)
G59550 gabrd non-coding upstream 466790 47457187 ~ 47461165 (+)
G59546 NA non-coding upstream 491002 47436570 ~ 47436953 (+)
G59731 NA non-coding downstream 489678 48423289 ~ 48423506 (+)
G59732 NA non-coding downstream 497311 48430922 ~ 48431231 (+)
G59733 NA non-coding downstream 500362 48433973 ~ 48434203 (+)
G59734 NA non-coding downstream 544226 48477837 ~ 48478110 (+)
G59735 NA non-coding downstream 544709 48478320 ~ 48478763 (+)
gnb1 gnb1,gnb1a,LOC103044197,LOC104956353,LOC107666091,LOC107595416,LOC107385217 other upstream 266598 47623554 ~ 47661357 (+)
G59257 cdk11a,LOC108265382 other upstream 1046064 46852364 ~ 46881891 (+)
G58971 NA other upstream 2137801 45789711 ~ 45790154 (+)
LOC103029434 dgcr6,LOC103029434,LOC108430318,LOC107572069,LOC107721026,LOC108265986,LOC105899531 other upstream 3061117 44852780 ~ 44866838 (+)
G58696 snrnp200,LOC106579886,LOC106585548 other upstream 3326995 44595233 ~ 44600960 (+)
G59782 NA other downstream 936556 48870167 ~ 48879623 (+)
G59806 NA other downstream 1064549 48998160 ~ 48998471 (+)
lhx4 lhx4,LOC108412864,LOC107665078,LOC107755297,LOC107599001,LOC107699337,LOC107550233,LOC107758007 other downstream 1388667 49322278 ~ 49370251 (+)
G59961 NA other downstream 1489905 49423516 ~ 49437613 (+)
LOC103025235 LOC103025235,LOC108413084,LOC108265140,LOC107598993,LOC107665077,LOC107755310,LOC107603028 other downstream 1934007 49867618 ~ 49990417 (+)

Expression


Co-expression Network