myl7 (myl7,LOC107554405,LOC107753162,LOC107703146)


Basic Information

Item Value
gene id myl7
gene name myl7,LOC107554405,LOC107753162,LOC107703146
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 33485649 ~ 33489950 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007237394.3
TTTTTATAAGCAGCACAGTGATAAGGTGTGCCACATAAAGCCCTAATCAGCTGCCCCTCCACCCTGGGCATTCACATTCAGTGACCACAGGCAACCAGCAGACATGGCAAGTAAGAAAGCTGCATCTAAAAGGAAGAATGCCCAGCGGGCCTCATCCAACGTCTTCTCCATGTTCGAGCAATCGCAAATTCAAGAGTTCAAAGAAGCCTTTGGCTGCATTGATCAGGACAGAGATGGCGTCATTAAGAAAACTGACCTGAAGGAAACCTACGCACAGTTAGGGAAACTGAATGTAAGTGACGAGGAGCTGGAGGGcatgctggctgagggaaaAGGTCCAATCAACTTCACTGTTTTCCTCAGCCTGTTTGGAGAAAAACTCAATgGAACTGACCCAGAGGAAACCATCCTTGCTGCCTTCAAACTGTTCGACCCGAATGGCACCGGCTTTGTCAACAAGGATGAGTTCAAAAGGTTGCTGTTAACCCAGGCAGACAAATTCACACAAGAAGAGGTGGAGCAGGCCTTTTCAGTTGCCCCCATAGACGTGACTGGGAATATAGACTACAAATCCCTTTGTTACATCATCACACATGGAGATGAGAAAGAagaatcctaaaaaaaaataaccatctCAGTCTCTGTCCATTCATATCTGCTGTTTTTATgattaaacacactgtaaaacata

Function

symbol description
myl7 Predicted to enable calcium ion binding activity. Acts upstream of or within several processes, including cardiac muscle cell proliferation; heart contraction; and myofibril assembly. Is expressed in several structures, including corpuscles of Stannius; heart primordium; mesoderm; muscle; and pericardial region. Orthologous to human MYL7 (myosin light chain 7).

NR:

description
myosin regulatory light chain 2, atrial isoform

GO:

id name namespace
GO:0055004 atrial cardiac myofibril assembly biological_process
GO:0055005 ventricular cardiac myofibril assembly biological_process
GO:0045823 positive regulation of heart contraction biological_process
GO:0045214 sarcomere organization biological_process
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12754 MYL7; myosin regulatory light chain 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007237394.3 True 691 mRNA 0.45 7 33485649 33489950

Neighbor

gene id symbol gene type direction distance location
LOC103025548 tbc1d10aa,LOC108441901,LOC107703173,LOC107753095,LOC107554420,LOC107657331,LOC107712481,LOC107550973 coding downstream 2885 33462386 ~ 33482764 (-)
LOC103025241 aplnra,LOC108441910,LOC107753098,LOC107712463,LOC107550977,LOC107703172,LOC107554406,LOC107687998 coding downstream 78977 33404530 ~ 33406672 (-)
LOC103024912 hpd,hpdb,LOC108441909,LOC107723232 coding downstream 113978 33361821 ~ 33371671 (-)
trnaa-agc_13 NA coding downstream 125208 33360369 ~ 33360441 (-)
fzd10 fzd10,LOC103024082,LOC108441898,LOC108266036,LOC107669258,LOC107659609,LOC107574912,LOC107723249 coding downstream 227398 33255719 ~ 33258251 (-)
npc1l1 npc1l1 coding upstream 46354 33536304 ~ 33564707 (-)
adgrd2 LOC108414364 coding upstream 950120 34440070 ~ 34468155 (-)
LOC103025191 LOC103025191,LOC108426622,LOC108265895 coding upstream 1045346 34535296 ~ 34539056 (-)
LOC103024553 si:dkey-90l8.3,LOC103024553,LOC108426648,LOC107698086,LOC107714563,LOC107556214,LOC107563853,LOC108264996,LOC105889949 coding upstream 1088867 34578817 ~ 34586862 (-)
LOC103024249 LOC108426649 coding upstream 1111462 34601412 ~ 34617121 (-)
G56189 NA non-coding downstream 105022 33377159 ~ 33380627 (-)
G56186 NA non-coding downstream 119036 33358765 ~ 33366613 (-)
G56172 NA non-coding downstream 149553 33255008 ~ 33336096 (-)
G56148 NA non-coding downstream 259061 33220492 ~ 33226588 (-)
G56137 NA non-coding downstream 307070 33178195 ~ 33178579 (-)
G56287 NA non-coding upstream 252946 33742896 ~ 33743734 (-)
G56293 NA non-coding upstream 260952 33750902 ~ 33756692 (-)
G56317 NA non-coding upstream 781635 34271585 ~ 34284706 (-)
G56323 NA non-coding upstream 805762 34295712 ~ 34296080 (-)
G56326 NA non-coding upstream 838785 34328735 ~ 34329529 (-)
LOC103023237 NA other downstream 307999 33149074 ~ 33177650 (-)
LOC103021360 LOC108440818,LOC107659619,LOC108265551,LOC107726210,LOC107553829,LOC107684495 other downstream 683489 32772027 ~ 32802160 (-)
LOC103043418 arpc5la,arpc5l,LOC108411248,LOC107571143,LOC108265305,LOC107550963,LOC107753090,LOC107676626 other downstream 1745428 31731464 ~ 31740221 (-)
LOC103027498 LOC108411246,LOC106585447 other downstream 1794841 31635481 ~ 31690808 (-)
LOC103046862 LOC108410878 other downstream 3551219 29896515 ~ 29934430 (-)
LOC103038119 LOC108412501,LOC107754395,LOC107671045 other upstream 1600780 35090730 ~ 35108420 (-)
acaa2 acaa2,LOC107671002 other upstream 1795472 35285422 ~ 35293421 (-)
c6h22orf39 NA other upstream 1806391 35296341 ~ 35299750 (-)
LOC103038782 slc25a25a,LOC108430373,LOC107754405,LOC107671014,LOC107699669,LOC107560063,LOC107559565,LOC107752985 other upstream 1832035 35321985 ~ 35332434 (-)
G56638 NA other upstream 1930880 35420830 ~ 35458874 (-)

Expression


Co-expression Network