LOC103033264


Basic Information

Item Value
gene id LOC103033264
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 13445386 ~ 13457273 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007239607.3
tgctgtctgctgctgctggagccgCTGGGTCTTCTCTTTCTGGgtctgctggagctgctggaactgctggagctGTGTGTGAGGAGATTGTTTCAGCGGGAGAGCTCAGAATTCAGCGCAGAGCAGAATGGACCCCAGCGCGGAGGAGTTCTGTGATATTCAGACGTTGCATAAGGAGGCTTTGAGAAACGCTGTGCTGAACTCTACCCAGGCGAGTACTCTTCTAGGGGGCCAGTCCATCAATGACATCATTTTAAACCATTGCTACACTCCTCTTTCTGCCAGCGTGGGTGAGGAGGCCTGTGTGGAGGAGAGTGAAGAGTGGGAGACGCTGGAGGCTGTGCTCTCCCGCGAGTTTGGAGAAGGTCATGGGGGTCGTAAGGTGATGCTGTGTGGAGGGGCTGGAATGGGGAAGACCACAGGGGTGGAGCAGCTGATTTGGGACTGGGCCGCAGGTACCCGTCTTCAGCACTACACCTTTCTTCTGCGGGTGTGTGTGGATACCCTTTTCACCAGCAAAAAGAGCCTGGAGGGCTTGCTGCTGACCAGTCACGCTAATTTTTCCACTGAAGCTCTTGCGATTGTCCTGCAGAGGCCTGCGGAATCGTTGCTTCTGGTTCTGGATGGGCTGGACCGCTTTCAAAACCTTCTGTCTGAATGTCCACCATCGGATGAGCTGGTGAATGACCCACAGCAACCAGTAGGAGGCGCTGTGCTTCTCCACAGTCTTCTGGAGGGCTTTCTGCTGCCTGGAGCGTCAATACTGCTCACCTCCAGAGAACCAATCCTGGACCTGGAGTCTTTGCAGTGCGTCCATCTGCTAGGCTTCTCTCAGGACCAGAGGAGAACGTTCGCCCAGCGTTTTTTCCAAAATGAAGCCAAAGCAGAGCAGATTCTCCATCACTGTGAGCAAGCTGTGGGCATGGCCGAACTCTGTGTGTGCCCCACCTTCTTTTGGATGCTTTGCTGTGTGTATAAGGAGTGTAAGGACCGTGCACCACAGACCCTGACTGAGCTGTGCTGCATTGTAACCCACAAGATTCTGCAAGAGCATAGTGTGAGTATGGAGGCAGGCAAGCAGCTCCTCTGTGGCCTGGGCAAGCTGGCAGATCACTGCACCTCCCTAACACAGACATCCTGCTCCTCCACTGAGGTCTTCGCCTGCGGCCTGCAGCCCTTCTTGGGTTCAGCGGTCCTTTCAGCCTTCCTGCGACTCAGTGGAGGTGATATCTCGTCTGATGAAGCCACGTTCTCCTTCTTATCGCCAGTCTTCAGAGAGTTTGTTTCAGCAGCCGCTTTCTACCTTGACCCGTCAGCTCCACACTCTGGTCAGGATGAAGGCGGTATCCCAGAAGAAGGAGAAGGCCTGCTTCATGTGTTCCTCGCCggcctttcagaccctgcacaGAGGACGCTTCTGAAGTCCTCGGTCGGTACGTTCAGCAGTGGCCGTCTTTCAGAGTTCCACCAATGGCTGATGAGTTCAGTGACGGAGGTTCTGCCAGGCTTTGAGAAGGAAAAGCACTGGCGTATGTTCCAGCTCCTGCATCACGCTCACAGCCCAGTGCTGGTCAGAGAGGGCGTGGGGTCCTGCCAGTGGAGGACGGTCAGCTACAGCGGCCTGCGGGTAGCGGACTGTGTGGCGCTGGCGTATATAGTGTGCTGCCTGGGGGAGATGGAGCATCTGAACCTGTACGGGAGCAAACTAACAGAGAAGCAGATGCTGAAGCTCCTGCCTGTCTTCCAGCTGGCCAGATCTGTTAATTTGTCTCAGAGTCATCTGAGCTCAGATGGGCTCAGACACCTGGCGCAGGCTATGATGGACGGACAGACCACCGCGCTGAACCTGTCGTACTCCAAACTGGGGGACGAGGCAGTAAAGACTCTCTGTCCCGCCCTCAAACACTCCAACCTGCAGACGCTCAAttTGAGAGTGTGTAATCTGACCCCAGGGTGCTGTGAGGCTCTTGGTCAGATGTTGTCGGGCtctaagctgtgtgtgttggatCTGGGAGGAAATGACCTGCAGGACCAGGGCCTTTCTCAGCTCATCAGTGCGGTGGGGACATCCAGCTGCAGACTGCAGGATCTCAGTATAGGTATGTGTTCTCTGAGTGGGGCGTGTGTTGCTGTGCTGTCATCAGCTTTGAGCTCTTCTCTCTCTGAGCTGAAGATACTGAACCTAAGGGACAACAGCCTGGCTGAAGACACTCTGGAGCTTCTCTCACAAGCCCTGCAGACAGGCCGCTCCAGCCTCAACACACTaacCTTGTTTGACTGTGAGCTGACGGATTCATGCTGCCCATCCATAGCGGCAATCCTCCAATCACATAACTGCCATCTGACTGAGCTGGACCTGTCTGTTAATGAACTTGGCCAATCAGGAGCTCTCGTCATCTTTGACACCCTCACAGCTCCTCAGTGTCCCCTGAAGAAGttatgCATGGTGAGGTGTGAGCTGACGGAGCAGGTTTTCAGTGTACTGGGAAGCGTGTTAGTATCTGCGACGTCCAGATTGAAGGAACTGGACATTGGAATAAACCCAGTTGGGGATGCTGGAGCGAAACACTTGTGGAAGGCCCTGAAACACCCCAACTGCAAACTACAGCATCTGGATCTAGAGATGATCTCGCTGACTGATGCCTCGGTGGATGAGCTGTGTGAAGCAGTTGCTGCCAGCACCTCTTTAACATCCCTAATTCTAAAGAACAACGGCCTCACTGACCTGTCCGTGCCCCGATTGGTCAAACTTGTTCAGGACCGTCCAATCATGAAAGAGCTCAATTTACAGTATAATGACTTCAGTGAGGATGTTTTTGAGCTGATGGACGTCTGCCCAAGGATACAGTATTAACACACCAGTATTCCATGTGATGAGTGTCTGTGACTGAGGAGCTTAAAGACTGTgggaaaaaaagttttacataTTGCAGAAGATGCAGAAGAATTACTTATGCATTATTAACAatgttaaaagtgtttattaataatgtagGAAGTGCTTACGAATGTGTCCTTCAGGCTTTACTTAAAATAATAGTCTATAACTataattatttaccttttaTGCAATTCTGTGCTCCATGTGGATATATTTTCTTACAGaaatttcattttctttaatgaaaattcacttttaatGCCAAAAGTCAATATAGTACAGAGTATGTGGTGTAGATGGTACTCTACAATTCAGAATTAAAAATTCAGTATTAAAGACAGTAACAAAAACAGACTGAATAATTCGACTTAATAAACATAAGGGAAGGTTTGTAAATTGTCATATACAGTGCTGTCAAAATGTATTTGCCCACTACAAATTTttgtttgcacttttttttatcatactgtaTTTTCGCACTTTAAGGCtcacttaattttttacattttcccaaaaatcgctttataatccgatgtgccttatgtatgaattttactagtGAGGTTGCAAGGAGCAGTAACGCTACCAGAGTAAATTGCCAGAGCCCTGGGAgcgcacaattggccttgctctttctgagtgggtagatgtcactctttcccctcatcactcaaagagtgatgttgatcag

Function

GO:

id name namespace
GO:0008144 drug binding molecular_function
GO:0019825 oxygen binding molecular_function
GO:0036094 small molecule binding molecular_function

KEGG:

id description
ko04640 Hematopoietic cell lineage
ko05144 Malaria

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007239607.3 True 3572 mRNA 0.50 10 13445386 13457273

Neighbor

gene id symbol gene type direction distance location
wdr13 wdr13,LOC107584863,LOC106572373,LOC107552201 coding downstream 55280 13369897 ~ 13390106 (-)
haus5 haus5 coding downstream 77068 13347239 ~ 13368318 (-)
dohh dohh,LOC107745802,LOC107548993,LOC106584359 coding downstream 112375 13326667 ~ 13333011 (-)
LOC103040738 adamts10,LOC107676806,LOC107731268,LOC107585873,LOC106613844 coding downstream 599940 12765442 ~ 12845446 (-)
LOC103044727 myo1f,LOC108413823,LOC108264988,LOC107750961,LOC108238367 coding downstream 699306 12698781 ~ 12746080 (-)
LOC103033893 NA coding upstream 3191 13460464 ~ 13467261 (-)
LOC103033588 tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107699804,LOC107710912 coding upstream 42191 13499464 ~ 13526880 (-)
fpgt NA coding upstream 71484 13528757 ~ 13533233 (-)
LOC103030626 LOC108439397,LOC107710923,LOC107548485,LOC107585821,LOC107657911 coding upstream 88418 13545691 ~ 13563488 (-)
dio1 dio1 coding upstream 136882 13594155 ~ 13597808 (-)
G51932 NA non-coding downstream 10841 13433901 ~ 13434545 (-)
G51842 NA non-coding downstream 43143 13367425 ~ 13402243 (-)
G51919 NA non-coding downstream 78551 13364816 ~ 13366835 (-)
G51916 NA non-coding downstream 80711 13362648 ~ 13364675 (-)
G51912 fzr1,fzr1a,LOC105895242 non-coding downstream 102168 13340424 ~ 13343218 (-)
G51941 NA non-coding upstream 30646 13487919 ~ 13490199 (-)
G51958 NA non-coding upstream 182615 13639888 ~ 13640119 (-)
G51992 NA non-coding upstream 422126 13879399 ~ 13885559 (-)
G52024 NA non-coding upstream 555100 14012373 ~ 14014008 (-)
LOC111192619 LOC108442363 non-coding upstream 581067 14038340 ~ 14063185 (-)
smim24 NA other downstream 121703 13285303 ~ 13323683 (-)
LOC103042573 cunh1orf21,zgc:92140,LOC107676598,LOC107585858,LOC107750760,LOC107700167 other downstream 1563445 11831802 ~ 11881941 (-)
G51346 NA other downstream 2240963 11204054 ~ 11204423 (-)
G51187 kansl3,LOC107678435 other downstream 3128919 10313482 ~ 10316467 (-)
LOC103023850 NA other downstream 3147938 10294056 ~ 10297448 (-)
LOC111192615 ssbp3b,LOC108439398,LOC108265320,LOC107585824,LOC107699856,LOC107710925,LOC107657912 other upstream 108725 13565998 ~ 13592947 (-)
G51960 glis1 other upstream 206128 13663401 ~ 13664114 (-)
G52161 NA other upstream 951663 14408936 ~ 14411611 (-)
G52299 NA other upstream 1619023 15076296 ~ 15084568 (-)
LOC103028883 LOC108430093 other upstream 2704367 16161640 ~ 16219847 (-)

Expression


Co-expression Network