wdr13 (wdr13,LOC107584863,LOC106572373,LOC107552201)


Basic Information

Item Value
gene id wdr13
gene name wdr13,LOC107584863,LOC106572373,LOC107552201
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 13369897 ~ 13390106 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245775.3
GCGGGGGAGGTGACTGACATGGCCGGGTTACTCGGCTGGGGGCTCGTTCAGTCGCGCTGGGTGTAGCCCGTTAGCTTGTGCGCTAGCTGCTAGTTTCCGTAGCCGCAGAGCTAACTGTTGCCTAGCAGTAGAGTTCAGGGACTGAATTGGCAATATTTGGCTCGTTTGATTAGATAAACGCATTTAAGCTTGTTTTAGATCCAGCGTGTGGAGATAAAGCTGTGGTGACATGAATCTCTCGCCGATTATGCCAAGTGGACCTGACCTGACCCCTACTGCCCTCAGCTTGTGTGGAATGGCTGCAGtttggcagcaggtgctggcaGTGGACGCAAGGTACAATGCATACCGCACGCCTACGTTCCCCCAGTTCCGCACGCAGTACATCCGCCGGCGCAGCCAGCTGCTCCGCGAGAACGCCAAGTGCGGCTTCGAGCCGGGGCTGCGCAGGCAGTACCTGCGTCTGCGCAGCCAGCTGCTCGCCCTGCGATACGGCCCGCTGTCAGAGCAGAGCAGCTTCAGAGCCAGCAGTGTGCGCAGCTCCCGCACCACACTGGACCGCATGGAGGACTTTGAGGAGGACCCCCGTGCTCAGGGTGCTCGAGGTCATCGGCGGTCAGTAAGTCGTGGGTCGTACCAACTGCAGGCCCAAATGAACAGAGCCGTTTATGAGGAGAGGCCTCCGGGCGCCTTGGTGCCCACGTCTGTGGCAGAGGCGAGTCGTGCCATGGCAGGTGACACCACTCTAAGTGAGAACTACGCCTTCGCTGGCATGCATCACATCTTTGACCAGCACGTCGACTCAGCTGTCCCACGACTGCAGTTTGCTAATGATGACAAGCATCTCCTCGCCTGCTGCTCGTTGGACTGCACCTTGTCCATTATGACCCTGTCCCCGTCCCCGCCAACAGTAAAGGTGACGCTGAAAGGACACGCAGGTCCGGTCACCGACTTCGCCTGGTCGCTTAGCAACGACATCATTGTGTCCACATCGCAGGACGGCACACTGCGCATCTGGAACACAGAAGATGGACGTTGCATCCGTGAGGTGGTCGACCCTGAAGCCAGCGAGCTCCTCTGCTGCACTTTCCAACCCATGAATAACAACCTCACTGTGGTTGGCAACAGTAAACACCTGTTGCAGGTGGTGAACATCTCCACGGGAAAGAAAGTCAAAGGAGGCTCCAGTAAACTGACCGGCCGAGTGCTCTCTCTTTCGTTTGATGCTCCGGGGAGGATTCTGTGGGCAGGGGATGACAGAGGAAGCATCTTCTCCTTTCTCTTTGACATGGCCACAGGGAAGCTAACTAAAGCCAAGAGGCTGGTGGTAAGTGAGGGAAGCTCCATCTCCAGCATCTCCGCTCGTTCCTGGATCAGCCGAGAAGCCCGAGACCCGTCTCTGCTCGTCAACGCTTGTGTCAATAAGCTCCTGCTTTACAGggTTGTGGATAATGAAGGCACTCTGCAGCTGAAGAGGAGTTTCCCCATCCAGCACGGCTCCCAGCCTCTCCACAGCATCTTCTGTCCCCTCATGTCCTTCAGGCAGGGGGCCTGTGTTGTGACCGGCAGTGAAGATGCGTGTGTGTATTTCTTCGATGTGGAGCGCAACACTAAGGCCATCGTAAACAAGCTGCAGGGTCACAGCGGCCCCGTGCTGGACGTCAGCTTCAACTGTGACGAGAGCATGCTGGCCTCCTCCGACGCGACAGGCATGGTCATCATCTGGAGACGCGAGCAGAAGTAAACCGCATCTACGCCAAGCTTCCGCTGCCCAGCAACAGCAGCTTCAGCGCTCGTCACTTCCAATCGTGTGCAATTTTACGATCCTGCCGCAACGAAGGCTGACAGAAGGTCCGGCCTGATCCGCCGAGTGTGGTTTGGTGGTGATGCTTGAAATGAGACTGAGCTACGTGTTTGTAAAACTTTCACATATCCTGTCCGTTTCCTGTGCAGCGCTGTCCATTAGAGTGTGATGCTTGCTTGAGACTTGTGGAAATCCATCCGTGCTTTACAGTCAACATGTATAAGTTAATTTAAAGGCCTACGAAATGGTTATTTAAGACTGGTATGATGTGGACATActggtgtgcgtgtgtgtacgtctgtgtgtatgtgtgtgtgtacatgtgtatgtatgtgtgtccGTAAGGATGTCTTTGCCTGAGGGAAGGTAATATCACTgaatgttttaatactgatgaggTCAGCTGGCGTATATGACAACACTACTGTATTTATGCCTTGTTAACATGTAATAAATTTCATCACATCATG
>XM_007245776.3
TCCGACGGATGGTATAGAGATCTGCGCGATTCCAGGCACTGGGAAAACCGGCGGTCACGTGACTGTGTCCGTCTGTCCAGGCAGGATGAGCCGGTGAGGATTTGGAGGGACCTGACCTGACCCCTACTGCCCTCAGCTTGTGTGGAATGGCTGCAGtttggcagcaggtgctggcaGTGGACGCAAGGTACAATGCATACCGCACGCCTACGTTCCCCCAGTTCCGCACGCAGTACATCCGCCGGCGCAGCCAGCTGCTCCGCGAGAACGCCAAGTGCGGCTTCGAGCCGGGGCTGCGCAGGCAGTACCTGCGTCTGCGCAGCCAGCTGCTCGCCCTGCGATACGGCCCGCTGTCAGAGCAGAGCAGCTTCAGAGCCAGCAGTGTGCGCAGCTCCCGCACCACACTGGACCGCATGGAGGACTTTGAGGAGGACCCCCGTGCTCAGGGTGCTCGAGGTCATCGGCGGTCAGTAAGTCGTGGGTCGTACCAACTGCAGGCCCAAATGAACAGAGCCGTTTATGAGGAGAGGCCTCCGGGCGCCTTGGTGCCCACGTCTGTGGCAGAGGCGAGTCGTGCCATGGCAGGTGACACCACTCTAAGTGAGAACTACGCCTTCGCTGGCATGCATCACATCTTTGACCAGCACGTCGACTCAGCTGTCCCACGACTGCAGTTTGCTAATGATGACAAGCATCTCCTCGCCTGCTGCTCGTTGGACTGCACCTTGTCCATTATGACCCTGTCCCCGTCCCCGCCAACAGTAAAGGTGACGCTGAAAGGACACGCAGGTCCGGTCACCGACTTCGCCTGGTCGCTTAGCAACGACATCATTGTGTCCACATCGCAGGACGGCACACTGCGCATCTGGAACACAGAAGATGGACGTTGCATCCGTGAGGTGGTCGACCCTGAAGCCAGCGAGCTCCTCTGCTGCACTTTCCAACCCATGAATAACAACCTCACTGTGGTTGGCAACAGTAAACACCTGTTGCAGGTGGTGAACATCTCCACGGGAAAGAAAGTCAAAGGAGGCTCCAGTAAACTGACCGGCCGAGTGCTCTCTCTTTCGTTTGATGCTCCGGGGAGGATTCTGTGGGCAGGGGATGACAGAGGAAGCATCTTCTCCTTTCTCTTTGACATGGCCACAGGGAAGCTAACTAAAGCCAAGAGGCTGGTGGTAAGTGAGGGAAGCTCCATCTCCAGCATCTCCGCTCGTTCCTGGATCAGCCGAGAAGCCCGAGACCCGTCTCTGCTCGTCAACGCTTGTGTCAATAAGCTCCTGCTTTACAGggTTGTGGATAATGAAGGCACTCTGCAGCTGAAGAGGAGTTTCCCCATCCAGCACGGCTCCCAGCCTCTCCACAGCATCTTCTGTCCCCTCATGTCCTTCAGGCAGGGGGCCTGTGTTGTGACCGGCAGTGAAGATGCGTGTGTGTATTTCTTCGATGTGGAGCGCAACACTAAGGCCATCGTAAACAAGCTGCAGGGTCACAGCGGCCCCGTGCTGGACGTCAGCTTCAACTGTGACGAGAGCATGCTGGCCTCCTCCGACGCGACAGGCATGGTCATCATCTGGAGACGCGAGCAGAAGTAAACCGCATCTACGCCAAGCTTCCGCTGCCCAGCAACAGCAGCTTCAGCGCTCGTCACTTCCAATCGTGTGCAATTTTACGATCCTGCCGCAACGAAGGCTGACAGAAGGTCCGGCCTGATCCGCCGAGTGTGGTTTGGTGGTGATGCTTGAAATGAGACTGAGCTACGTGTTTGTAAAACTTTCACATATCCTGTCCGTTTCCTGTGCAGCGCTGTCCATTAGAGTGTGATGCTTGCTTGAGACTTGTGGAAATCCATCCGTGCTTTACAGTCAACATGTATAAGTTAATTTAAAGGCCTACGAAATGGTTATTTAAGACTGGTATGATGTGGACATActggtgtgcgtgtgtgtacgtctgtgtgtatgtgtgtgtgtacatgtgtatgtatgtgtgtccGTAAGGATGTCTTTGCCTGAGGGAAGGTAATATCACTgaatgttttaatactgatgaggTCAGCTGGCGTATATGACAACACTACTGTATTTATGCCTTGTTAACATGTAATAAATTTCATCACATCATG
>XM_022670224.1
gggcactttaCCTACGCATTTCAACCATGGGGGCATTGGGAGGGCGGTTGCCCCCACTGCTCCCCCCTTGAGTTCTTCACTGTTCAGGGACCTGACCTGACCCCTACTGCCCTCAGCTTGTGTGGAATGGCTGCAGtttggcagcaggtgctggcaGTGGACGCAAGGTACAATGCATACCGCACGCCTACGTTCCCCCAGTTCCGCACGCAGTACATCCGCCGGCGCAGCCAGCTGCTCCGCGAGAACGCCAAGTGCGGCTTCGAGCCGGGGCTGCGCAGGCAGTACCTGCGTCTGCGCAGCCAGCTGCTCGCCCTGCGATACGGCCCGCTGTCAGAGCAGAGCAGCTTCAGAGCCAGCAGTGTGCGCAGCTCCCGCACCACACTGGACCGCATGGAGGACTTTGAGGAGGACCCCCGTGCTCAGGGTGCTCGAGGTCATCGGCGGTCAGTAAGTCGTGGGTCGTACCAACTGCAGGCCCAAATGAACAGAGCCGTTTATGAGGAGAGGCCTCCGGGCGCCTTGGTGCCCACGTCTGTGGCAGAGGCGAGTCGTGCCATGGCAGGTGACACCACTCTAAGTGAGAACTACGCCTTCGCTGGCATGCATCACATCTTTGACCAGCACGTCGACTCAGCTGTCCCACGACTGCAGTTTGCTAATGATGACAAGCATCTCCTCGCCTGCTGCTCGTTGGACTGCACCTTGTCCATTATGACCCTGTCCCCGTCCCCGCCAACAGTAAAGGTGACGCTGAAAGGACACGCAGGTCCGGTCACCGACTTCGCCTGGTCGCTTAGCAACGACATCATTGTGTCCACATCGCAGGACGGCACACTGCGCATCTGGAACACAGAAGATGGACGTTGCATCCGTGAGGTGGTCGACCCTGAAGCCAGCGAGCTCCTCTGCTGCACTTTCCAACCCATGAATAACAACCTCACTGTGGTTGGCAACAGTAAACACCTGTTGCAGGTGGTGAACATCTCCACGGGAAAGAAAGTCAAAGGAGGCTCCAGTAAACTGACCGGCCGAGTGCTCTCTCTTTCGTTTGATGCTCCGGGGAGGATTCTGTGGGCAGGGGATGACAGAGGAAGCATCTTCTCCTTTCTCTTTGACATGGCCACAGGGAAGCTAACTAAAGCCAAGAGGCTGGTGGTAAGTGAGGGAAGCTCCATCTCCAGCATCTCCGCTCGTTCCTGGATCAGCCGAGAAGCCCGAGACCCGTCTCTGCTCGTCAACGCTTGTGTCAATAAGCTCCTGCTTTACAGggTTGTGGATAATGAAGGCACTCTGCAGCTGAAGAGGAGTTTCCCCATCCAGCACGGCTCCCAGCCTCTCCACAGCATCTTCTGTCCCCTCATGTCCTTCAGGCAGGGGGCCTGTGTTGTGACCGGCAGTGAAGATGCGTGTGTGTATTTCTTCGATGTGGAGCGCAACACTAAGGCCATCGTAAACAAGCTGCAGGGTCACAGCGGCCCCGTGCTGGACGTCAGCTTCAACTGTGACGAGAGCATGCTGGCCTCCTCCGACGCGACAGGCATGGTCATCATCTGGAGACGCGAGCAGAAGTAAACCGCATCTACGCCAAGCTTCCGCTGCCCAGCAACAGCAGCTTCAGCGCTCGTCACTTCCAATCGTGTGCAATTTTACGATCCTGCCGCAACGAAGGCTGACAGAAGGTCCGGCCTGATCCGCCGAGTGTGGTTTGGTGGTGATGCTTGAAATGAGACTGAGCTACGTGTTTGTAAAACTTTCACATATCCTGTCCGTTTCCTGTGCAGCGCTGTCCATTAGAGTGTGATGCTTGCTTGAGACTTGTGGAAATCCATCCGTGCTTTACAGTCAACATGTATAAGTTAATTTAAAGGCCTACGAAATGGTTATTTAAGACTGGTATGATGTGGACATActggtgtgcgtgtgtgtacgtctgtgtgtatgtgtgtgtgtacatgtgtatgtatgtgtgtccGTAAGGATGTCTTTGCCTGAGGGAAGGTAATATCACTgaatgttttaatactgatgaggTCAGCTGGCGTATATGACAACACTACTGTATTTATGCCTTGTTAACATGTAATAAATTTCATCACATCATG
>XM_022670225.1
CTGCAAACTGAGCTGTTCAACAATTGTTTTCCTGTCAGACAGCGACTGAAAGAGCTGTTTCTGCGAGGCGTGACTGGAGAGAGAGGGACCTGACCTGACCCCTACTGCCCTCAGCTTGTGTGGAATGGCTGCAGtttggcagcaggtgctggcaGTGGACGCAAGGTACAATGCATACCGCACGCCTACGTTCCCCCAGTTCCGCACGCAGTACATCCGCCGGCGCAGCCAGCTGCTCCGCGAGAACGCCAAGTGCGGCTTCGAGCCGGGGCTGCGCAGGCAGTACCTGCGTCTGCGCAGCCAGCTGCTCGCCCTGCGATACGGCCCGCTGTCAGAGCAGAGCAGCTTCAGAGCCAGCAGTGTGCGCAGCTCCCGCACCACACTGGACCGCATGGAGGACTTTGAGGAGGACCCCCGTGCTCAGGGTGCTCGAGGTCATCGGCGGTCAGTAAGTCGTGGGTCGTACCAACTGCAGGCCCAAATGAACAGAGCCGTTTATGAGGAGAGGCCTCCGGGCGCCTTGGTGCCCACGTCTGTGGCAGAGGCGAGTCGTGCCATGGCAGGTGACACCACTCTAAGTGAGAACTACGCCTTCGCTGGCATGCATCACATCTTTGACCAGCACGTCGACTCAGCTGTCCCACGACTGCAGTTTGCTAATGATGACAAGCATCTCCTCGCCTGCTGCTCGTTGGACTGCACCTTGTCCATTATGACCCTGTCCCCGTCCCCGCCAACAGTAAAGGTGACGCTGAAAGGACACGCAGGTCCGGTCACCGACTTCGCCTGGTCGCTTAGCAACGACATCATTGTGTCCACATCGCAGGACGGCACACTGCGCATCTGGAACACAGAAGATGGACGTTGCATCCGTGAGGTGGTCGACCCTGAAGCCAGCGAGCTCCTCTGCTGCACTTTCCAACCCATGAATAACAACCTCACTGTGGTTGGCAACAGTAAACACCTGTTGCAGGTGGTGAACATCTCCACGGGAAAGAAAGTCAAAGGAGGCTCCAGTAAACTGACCGGCCGAGTGCTCTCTCTTTCGTTTGATGCTCCGGGGAGGATTCTGTGGGCAGGGGATGACAGAGGAAGCATCTTCTCCTTTCTCTTTGACATGGCCACAGGGAAGCTAACTAAAGCCAAGAGGCTGGTGGTAAGTGAGGGAAGCTCCATCTCCAGCATCTCCGCTCGTTCCTGGATCAGCCGAGAAGCCCGAGACCCGTCTCTGCTCGTCAACGCTTGTGTCAATAAGCTCCTGCTTTACAGggTTGTGGATAATGAAGGCACTCTGCAGCTGAAGAGGAGTTTCCCCATCCAGCACGGCTCCCAGCCTCTCCACAGCATCTTCTGTCCCCTCATGTCCTTCAGGCAGGGGGCCTGTGTTGTGACCGGCAGTGAAGATGCGTGTGTGTATTTCTTCGATGTGGAGCGCAACACTAAGGCCATCGTAAACAAGCTGCAGGGTCACAGCGGCCCCGTGCTGGACGTCAGCTTCAACTGTGACGAGAGCATGCTGGCCTCCTCCGACGCGACAGGCATGGTCATCATCTGGAGACGCGAGCAGAAGTAAACCGCATCTACGCCAAGCTTCCGCTGCCCAGCAACAGCAGCTTCAGCGCTCGTCACTTCCAATCGTGTGCAATTTTACGATCCTGCCGCAACGAAGGCTGACAGAAGGTCCGGCCTGATCCGCCGAGTGTGGTTTGGTGGTGATGCTTGAAATGAGACTGAGCTACGTGTTTGTAAAACTTTCACATATCCTGTCCGTTTCCTGTGCAGCGCTGTCCATTAGAGTGTGATGCTTGCTTGAGACTTGTGGAAATCCATCCGTGCTTTACAGTCAACATGTATAAGTTAATTTAAAGGCCTACGAAATGGTTATTTAAGACTGGTATGATGTGGACATActggtgtgcgtgtgtgtacgtctgtgtgtatgtgtgtgtgtacatgtgtatgtatgtgtgtccGTAAGGATGTCTTTGCCTGAGGGAAGGTAATATCACTgaatgttttaatactgatgaggTCAGCTGGCGTATATGACAACACTACTGTATTTATGCCTTGTTAACATGTAATAAATTTCATCACATCATG

Function

symbol description
wdr13 Orthologous to human WDR13 (WD repeat domain 13).

NR:

description
PREDICTED: WD repeat-containing protein 13 isoform X1

GO: NA

KEGG:

id description
K24739 WDR13; WD repeat-containing protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245775.3 True 2274 mRNA 0.55 10 13369897 13380050
XM_007245776.3 False 2125 mRNA 0.55 10 13369897 13380243
XM_022670224.1 False 2105 mRNA 0.55 10 13369897 13386605
XM_022670225.1 False 2103 mRNA 0.55 10 13369897 13390106

Neighbor

gene id symbol gene type direction distance location
haus5 haus5 coding downstream 1579 13347239 ~ 13368318 (-)
dohh dohh,LOC107745802,LOC107548993,LOC106584359 coding downstream 36886 13326667 ~ 13333011 (-)
LOC103040738 adamts10,LOC107676806,LOC107731268,LOC107585873,LOC106613844 coding downstream 524451 12765442 ~ 12845446 (-)
LOC103044727 myo1f,LOC108413823,LOC108264988,LOC107750961,LOC108238367 coding downstream 623817 12698781 ~ 12746080 (-)
acer1 acer1,LOC107585930,LOC107731201,LOC107676796 coding downstream 675032 12679475 ~ 12694865 (-)
LOC103033264 NA coding upstream 55280 13445386 ~ 13457273 (-)
LOC103033893 NA coding upstream 70358 13460464 ~ 13467261 (-)
LOC103033588 tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107699804,LOC107710912 coding upstream 109358 13499464 ~ 13526880 (-)
fpgt NA coding upstream 138651 13528757 ~ 13533233 (-)
LOC103030626 LOC108439397,LOC107710923,LOC107548485,LOC107585821,LOC107657911 coding upstream 155585 13545691 ~ 13563488 (-)
G51919 NA non-coding downstream 3062 13364816 ~ 13366835 (-)
G51916 NA non-coding downstream 5222 13362648 ~ 13364675 (-)
G51912 fzr1,fzr1a,LOC105895242 non-coding downstream 26679 13340424 ~ 13343218 (-)
G51840 NA non-coding downstream 47467 13312031 ~ 13322430 (-)
LOC111192612 NA non-coding downstream 275063 13078332 ~ 13094834 (-)
G51932 NA non-coding upstream 43795 13433901 ~ 13434545 (-)
G51941 NA non-coding upstream 97813 13487919 ~ 13490199 (-)
G51958 NA non-coding upstream 249782 13639888 ~ 13640119 (-)
G51992 NA non-coding upstream 489293 13879399 ~ 13885559 (-)
G52024 NA non-coding upstream 622267 14012373 ~ 14014008 (-)
smim24 NA other downstream 46214 13285303 ~ 13323683 (-)
LOC103042573 cunh1orf21,zgc:92140,LOC107676598,LOC107585858,LOC107750760,LOC107700167 other downstream 1487956 11831802 ~ 11881941 (-)
G51346 NA other downstream 2165474 11204054 ~ 11204423 (-)
G51187 kansl3,LOC107678435 other downstream 3053430 10313482 ~ 10316467 (-)
LOC103023850 NA other downstream 3072449 10294056 ~ 10297448 (-)
LOC111192615 ssbp3b,LOC108439398,LOC108265320,LOC107585824,LOC107699856,LOC107710925,LOC107657912 other upstream 175892 13565998 ~ 13592947 (-)
G51960 glis1 other upstream 273295 13663401 ~ 13664114 (-)
G52161 NA other upstream 1018830 14408936 ~ 14411611 (-)
G52299 NA other upstream 1686190 15076296 ~ 15084568 (-)
LOC103028883 LOC108430093 other upstream 2771534 16161640 ~ 16219847 (-)

Expression


Co-expression Network