LOC103045339 (mllt1a,mllt1)


Basic Information

Item Value
gene id LOC103045339
gene name mllt1a,mllt1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 12652988 ~ 12676899 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245794.3
CGTCTCGGTTCGTGCCAGCGGTCTGGAAGGGGAGGGGCGGCGCCTGGGTTTCCGGTACTCGGCCGAAAGTGCCACACAATGAGCGGGGCAGGTCCGGAACAAACCCGCCGGTGAACGGACAGAGTGCCGCCGGGACCCGGAGCACCATGGAGGACCAGtgcacgGTGCAGGTGAAGTTGGAGCTGGGCCACCGCGCTCAGCTGCGGAAAAAGGTCACGTCCGAGGGCTTCACTCACGACTGGATGGTGTTCGTGCGAGGGCCGGAGAACAGCGACATCCAGCACTTTGTGGATAAAGTCATCTTCCGCCTGCACGACAGCTTTCCCAAGCCCAAAAGAGTGTGTAAGGAGCCGCCGTACAAGGTGGAAGAATCGGGCTATGCTGGATTTCTAATGCCCATAGAGGTCTACTTTAAAAACAAGGAGGAACCGAAGAAGGTACTCTTTAACTACGACCTTTTCCTGAATCTGGAGGGAAACCCACCTGTCAATCACCTGCGCTGCGAAAAACTCACCTTCAACAACCCCACCAGAGACTTCCGTCGCAAACTGGTCAAAGCTGGCGGGATCATTGTGGTGCCGGAGGGAGCGGAGGCCGTGTCCAGGCCGAGTCCAGATTACCCCATGCTACCCACCATCCCACTGTCAGCCTTCTCCGACCCCAAGAAGAGTAAAGGCTCCCAAGCCCCCAAGGAGCTCACTAAAGATAACAGCGGAAGCTCTAAAGCCCCAAAACCTCACAAACTCGCCAAGGAGCATCGGGAACGGCCCCGAAAAGACTCAGAGAGCAAAGCCACGTCCAAAGGAGAAGGAGACAGAGACGGCAGCAGCAAAAGCAGCCGAGAAACTTCGTCATTTCCTTCGTCGTCATCGTCATCCTCGTCAAAGAAGCCAGAGATCAAAGTTAAAGAGGAGAGCAAAGCCCCGCCAAAAGCTGCCTTCAAAGAGCCGAAGCTGACGCTGAAGGAGTCCAAAATGGAGGGGATGTCTCCTAAAGGGGGCGGTCCAGGAGCAGGAGGGGGAGGCGGGGCTTCGGCCGACGGAAAATCGGCCAGCAAGCGGCCCTCCAACGCAGACTCGCCCAAACCTAGTGTCAAGAAGCCCAAAAAAGGTGTGACTGAAGGGCAGAAGAGTTCCAGCAGCGGGGGCTTCCCCAGCACCTCCCCACGCGTCTCGTCTTCCTCCGCACCATCAGGGTACCCAGACAAAAAGGGCTCCAAGGACAAAGGCCGCTGGGTAAAGAGCAAGGTGGACACCCAGGAGGTCAAAGAGCCGAAGAAACCGCCAGAATCTGACGAGTCCAACTCTGACGACGAGGTTTCGTCCAAATCCGAGcaatCAGCCCCTTCCAGTCCCTCAAACTCCAGCTCCAGTTCAGAGTCCAGTTCCGACTCTGACTTTGAGCCGCAGCAGAAAGCAGGCCAAGGGCCGCTGCGCTCCATGGTGGAGGACCTGCAGTCAGAGGAGTCAGATGAAGATGACAGCAGCTCAGACGAGGGGACGCCTGTCAAAAACAACCCACCCAACCGTGACTCCAGACTGAGCTTAGACAGCGAGAGTGACAGCAGTGACGGTCAGCACCGGCCCAGCCGggacccacccccaccccagAAACACACCTCCTCCAATAACAAGGTGACGGGTAGGAAAAGCCCAGACCCGTGCCTGAGACAGGAGAAGGCCCTGAAGAAGGTTTACGACAAGGCTTACACAGAGGAGTTAGTGGACCTTCATCGCAGACTAATGGCACTGAGAGAGCGTAATGTACTACagcagATCGTCAACCTCATTGAAGAAACTGGCCACTTCAACGTCACCAACACCACCTTTGACTTTGACCTTTTCTCACTGGACGAGTCGACCGTCCGTAAACTGCAGAGTTACCTTGACCCCACCGCCACGTGACAGGAAGTGGGGCTTTAATTTAGGGGCCAGGCTTGCCCTCGTTTGCCACTTTCGGCCTTGAGGGCGGGTTCGAAGATGGAGCTGGAGAACAATGACAATGACAACAAATTAATGAGGATGAAGAGGCGAATGGACGTAATGAGCGAAAAAGGAACAGGATCACGTGAACGTGTCGGGATTGAAGATGACGAggcacagagaaagagaggcaggcGGGGCGGGCGGGCGGGCGAGTGGATTCACTGAGATGCTCTGCTGCTGGATTTGGATTTTGAAGCCTGGAAGCAGCTATAAGCCACTTTCCGTTTGAGTTGCGCTGTAGGCTGGTTCTGGGGGGCTGGTGGGGTCGAGGTTTGTTCTGCGAGCTTCTTCAGTAAAACTGAAGCATGGAATTGGGCGAGTGCCCACCCCTTCCCATCCGTTTCAGTTTTCAGCCTTCGCAAAGCTagcgttaaaaaaaaatcaacccaCCCACCCCCACTACGACTCCGAGGTAACCACGACTCCAGCGTAACCACCACAGCATGCTGCTTCTCTGCTTAACGTTCATCTTCTCACATTGGTCTGTGCGGATGTGCCTCTCTCGCTGGCTGTGAAAACCACTTGCTGATACACTTGTGAAGGCCTGAGAGCTGCTGGTGtgcaggcgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtttaagtatgTGTGCGTTTTTATCTGTAGATATCTCCTGTCCTTTTGagcttcttcctcttcctcttcttctggcATTGAAGCGTCCGGATTCGCCTTGGAAGCGTCTCTAAAGTAGCCATACTCACACATGGGGTGGGGGTGGACTTGGGCTTGGGGGGAGGGGGCAGGGCGCCacctttttgatattttatttttgtacagatGTTTCTGAAGTATTTTTGATGGAGGGAAGCGTGTGAGATATGAATGTATTTGCTGTTTGTCGTCTagggctagcgcttagtgcCTTTACCAACCAGCCAACTGCCTGCGTTTGGAAGGAGTGTTTAAAAAGTGTCGTGGTGCCCCTCTGTGATGCTAGCgaagcacaaaaaaatacaaatcccGCCCCTTTTCTCCATGTGTGATGCCTAGAAAGCTAGCGTTTCGTTCTGGGTGCGTTCTCTCCGATCTGAATCCGCGAGTCCCCCACTTTCACCGGTATGTATTAATTACTGTGTTGCCAAATAGGCCTTTTAGAAACCCTTGGGTATTGTATGTAGGTAGTGCAATGTGTGCAAGTATTTGGGGATCATCTAATATTTTTAGGTCCTTTGTGTTATATGAAGTCTGGAGGAGGCTAACCAGAGCGGGAAagaagtggagagagtgagtcGGAGATTCCTAataattcctaataaaaaagaTCGGCTCacgtaggggtgggtgatatggaaaATACATGATTATATTTTATCGTATTGTGACGAATTTAATTATTGCATTGTCAATATGCTTTTTTTGAGGATATATTGAGGATATCGCAAGTGCTTAACGAACACTGACCCAACTAAACATACTATTATAGAGAGTATTAAAAAAGCGTGCTatgcatgaaaaagtatttaaatatgttttaggaATAAGCCACAGTTGATGCACTGTGTCTTAAATATTGCGAGTATATGTAAAAAAagtcacaatatttaaagatattttatatatatattgcagtattGTAACGCAAGCAGACAAAATGCTTCAGTAAcagtaactgattattaattgcTGTTGTTCAGACACTTGACTTTTATATTCAAATTATGTTTGTCCAGTTAACAGCCCTAGTTTCTCTTTTtcatcaaatattcaaatattcagtgtattttaaagcagcagtctctAAAAAGTGTTAGCCGTAGTATTCCTGAGTTGCGGGggattattataatataattaaataattaaatattctaGTTAATAGAGAtttgttggatgtaattgctctgtacattttacagtatttcataaattaacaaaatgaatgaaacaacatgctaaaaacaacagaatttCATGCAGCAATTTGTTTAGAATAACATAGCATTAAAAGTGCTCTTTAACAAgctctgtgtaattacacattctcaccagagaggtctctaaatccccaaatacTAAAATCTTACGGACTGTCgctttaagcactgatgatatCCATGATATACTCAGAAACTTATATCATGTAATGCAACAACAAAATTTATCACAAAACGATAAAATATTGCTCACTATTTTGTCTTATTGCCCACCCCTTGGCTCATACCCCCTTTGGTTCCCCACAAAGCAGGATTTCTCAAATAGTCTGAAGATTTGAGCCTGAAGTCAAATCTATCGGTTTCTGTAGTATTATACTTACACTTATATTTGGGCTTATATTTGAGCAGATCACACGGtggagttttacattttatgttttgttttattttattttattttatttttttaatgaagctAATTCCAAAagataaactgttttttattattatttgagattATTGCAGTTGTACAGTATTGCTGCACATTgccaataatattaaatatatttttaaaaaagcatgttacactcttaaaaataaaaggtgcTACATTGTTTTCTTTGAGCAATGAATAAAAGAACCATTTTAGAGATTTaacaaagatttttaaaaaaaatcagcttaagtgttctgtatcagtttaacTCCTTAAACCCTAAGTAAGTAAGCCCACACTTCAGTGAACTACATTCATATCAGAAATTACTAAGGCCTTAAAAAAAAGAGCCCTGTGAGACTCCACAAGTATGGGCTAATAACAGAATACGACATATCTGTGGTTTAAGATGGCCTAAATGTTCTTTACACAGCTTCTGTTCAAAAACTGCTTCTTTTATGGCACCTCTTGAAGAAACCTTTATAGCACCATTTGTGTTTTAAGAGTGCAGTGAAGCTCCGCCTGATTCAGAGAGGTTTAGGATAGCCTGCATTACACTACTGTACAACAGACTTATATCCCAAagctattttctattttagtttgttttctttgtttaatcTGCAGTTTGTTATTTTACAGGTCTGTTATATAAATCATTATACTGTAAGTCATGTATATTTGTCAGGTTAGCGTTTAGTCTCTGGATT

Function

symbol description
mllt1a Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Orthologous to human MLLT1 (MLLT1 super elongation complex subunit).
mllt1 Predicted to be involved in regulation of transcription, DNA-templated. Predicted to act upstream of or within negative regulation of protein kinase activity. Located in cytosol; fibrillar center; and nucleoplasm. Part of transcription elongation factor complex.

NR:

description
protein ENL isoform X3

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K15187 MLLT1_3, ENL, AF9; YEATS domain-containing protein 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245794.3 True 5049 mRNA 0.46 13 12652988 12676899

Neighbor

gene id symbol gene type direction distance location
rfx2 rfx2,LOC106584375 coding downstream 49987 12544875 ~ 12603001 (-)
LOC103047683 LOC108442341 coding downstream 217171 12423633 ~ 12435817 (-)
LOC103041038 LOC108442342,LOC104956570,LOC106513913,LOC107751058 coding downstream 258653 12287995 ~ 12394335 (-)
LOC103022651 fam78bb,LOC108439404,LOC105894228,LOC107717547,LOC107676968,LOC108265143 coding downstream 549919 12095021 ~ 12103069 (-)
edem3 edem3,LOC107717559,LOC107585860,LOC107750782,LOC107548759,LOC107700180 coding downstream 742582 11883445 ~ 11910406 (-)
acer1 acer1,LOC107585930,LOC107731201,LOC107676796 coding upstream 2576 12679475 ~ 12694865 (-)
LOC103044727 myo1f,LOC108413823,LOC108264988,LOC107750961,LOC108238367 coding upstream 21882 12698781 ~ 12746080 (-)
LOC103040738 adamts10,LOC107676806,LOC107731268,LOC107585873,LOC106613844 coding upstream 88543 12765442 ~ 12845446 (-)
dohh dohh,LOC107745802,LOC107548993,LOC106584359 coding upstream 649768 13326667 ~ 13333011 (-)
haus5 haus5 coding upstream 670340 13347239 ~ 13368318 (-)
G51631 NA non-coding downstream 109981 12537239 ~ 12543007 (-)
G51637 NA non-coding downstream 136067 12516471 ~ 12516921 (-)
G51617 NA non-coding downstream 205322 12357532 ~ 12447666 (-)
G51559 NA non-coding downstream 468996 12183780 ~ 12183992 (-)
G51536 NA non-coding downstream 578875 12073658 ~ 12074113 (-)
G51666 NA non-coding upstream 75599 12752498 ~ 12752796 (-)
G51668 NA non-coding upstream 76238 12753137 ~ 12753679 (-)
G51671 NA non-coding upstream 79056 12755955 ~ 12756361 (-)
G51841 NA non-coding upstream 158790 12835689 ~ 13031555 (-)
G51843 NA non-coding upstream 174694 12851593 ~ 12932059 (-)
LOC103042573 cunh1orf21,zgc:92140,LOC107676598,LOC107585858,LOC107750760,LOC107700167 other downstream 771047 11831802 ~ 11881941 (-)
G51346 NA other downstream 1448565 11204054 ~ 11204423 (-)
G51187 kansl3,LOC107678435 other downstream 2336521 10313482 ~ 10316467 (-)
LOC103023850 NA other downstream 2355540 10294056 ~ 10297448 (-)
LOC103022194 LOC103022194 other downstream 2366045 10282487 ~ 10286943 (-)
smim24 NA other upstream 608404 13285303 ~ 13323683 (-)
LOC111192615 ssbp3b,LOC108439398,LOC108265320,LOC107585824,LOC107699856,LOC107710925,LOC107657912 other upstream 889099 13565998 ~ 13592947 (-)
G51960 glis1 other upstream 986502 13663401 ~ 13664114 (-)
G52161 NA other upstream 1732037 14408936 ~ 14411611 (-)
G52299 NA other upstream 2399397 15076296 ~ 15084568 (-)

Expression


Co-expression Network