LOC103021710 (LOC103021710,LOC108414840,LOC108265329)


Basic Information

Item Value
gene id LOC103021710
gene name LOC103021710,LOC108414840,LOC108265329
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 29946689 ~ 29950373 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247112.3
attgaggagaaaatgggaaaaaattagaaaaaaaaagaaaaagaaagaagagggcTGAGGCATTCAATGATGTGATGATGAAAAAGGCAATATTAGGTatttggttttaatgttatggctgattggtgtaagTTTCACTGACTTGTATTAGCCTAGTCTGCCTTCAGAGCTGGTTAACAAGTCAATGTTATTGGTAACCATGGAGAAGATTtactgcatgtgtgtgagtcatatatatatatatacgcagATAGAttacactgtgtgtataagGGGTCTGTCTTGAATGCGCAGGCCAAGCATAGCTGATTGAAAGCCAAGTCCATGAATCTGAAAATAGCCCACTCTACTGACCCGCCTGCCTGCCTGACCCAGCCTTCTGAACACTGTGAACTGACAGCTTGGAGATCGACAGACCTCTTCACTCCTCCAGATCGCCTGAAATCGAGACCCACATCACGGCTCGGGTTTCATAACAAAACTTCTGCATCTTCTTCAATAAAACAGGCCAACAAATGTCATCCAGGACCAAATCCTCTGAATGGAGGAGAGACTCCCGTTCCTACCAAGTGGAGGTTGATTTCACCTCGCCCGGCTTGGCCGTGATGGAGGTTGAGAAACTTCTCTTCTGCGGAAGATCGATCAACAGCCATGCTAATGAAGTCTGGCCCAGACTTTATATAGGAGACATGGACTTTGCTGAGAACCGAGCAGAACTGCGCAGGCAGAACTTCACTCATGTCCTGAACTGCGCTCACAGCACCAGGAGAGGGGCTGAGTTTTATGACGGAATGGGCATCACCTACCTGGGCATTGAGGCACACGATTCACCAGCCTACGACATGAGCGTCAACTTCAACACTGGAGCAGAGTTCATTCACAATGCACTCAGAGGAAGGGGTAAAATCCTGGTGCACTGTCACGTTGGAGTTAGCCGCTCAGCCACTGTAGTGTTGGCCTACATGATGCTGAAGCAAAACATGACCCTGGTGGAGGCGATCAACACAGTCAAAGAAGGAAGAGGAATTATTCCCAACCGAGGCTTCCTCAGACAACTTATTGACCTTCATGTTAAACTGTACGGCTACAGAACCTAAAGACTTTTACTGTGGCTTCTGAACTCTGAGGACAGAGGACAGTTCAGCATGAATGTAGTTTATCATCGATGATAATTACATCAGAATATGCTGCTCTGCTGTTCACTTCAGTAAAACCTGGAATCACTGGGACTGGAACTGGAacttgattttgtgtttttgtaaaaatttgaagtaaataaaatctttgaaaatgatatgtatatttaataaatctgtATAATGTAAAACATCTCTCAGTCTAGTTGTGAACCTGTGGCTGTGTTCTAAACCA

Function

NR:

description
dual specificity protein phosphatase 26-like

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0005615 extracellular space cellular_component
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247112.3 True 1371 mRNA 0.44 3 29946689 29950373

Neighbor

gene id symbol gene type direction distance location
rsph14 NA coding downstream 6402 29935109 ~ 29940287 (-)
LOC103022657 LOC108410872 coding downstream 51639 29856741 ~ 29895050 (-)
LOC103023281 NA coding downstream 190083 29748846 ~ 29756606 (-)
LOC103023912 LOC108410873 coding downstream 208144 29731438 ~ 29738545 (-)
LOC103024435 NA coding downstream 244033 29670367 ~ 29702656 (-)
bag4 bag4,LOC102796320 coding upstream 5314 29955687 ~ 29963322 (-)
pold2 pold2,LOC107747204 coding upstream 170563 30120936 ~ 30127928 (-)
sf3a1 sf3a1,LOC107550953 coding upstream 180015 30130388 ~ 30138774 (-)
LOC103027196 slc7a4 coding upstream 268298 30218671 ~ 30231674 (-)
polr2m LOC108435653 coding upstream 472765 30423138 ~ 30436533 (-)
LOC111192661 NA non-coding downstream 93171 29844882 ~ 29853518 (-)
G55434 NA non-coding downstream 99581 29846706 ~ 29847108 (-)
G55433 NA non-coding downstream 102287 29843435 ~ 29844402 (-)
G55387 NA non-coding downstream 218922 29646044 ~ 29727767 (-)
G55336 NA non-coding downstream 421562 29524653 ~ 29525127 (-)
G55466 NA non-coding upstream 94079 30044452 ~ 30089255 (-)
G55468 LOC105889975,LOC108265152,LOC107548280 non-coding upstream 96842 30047215 ~ 30049185 (-)
G55479 NA non-coding upstream 150405 30100778 ~ 30104106 (-)
G55491 NA non-coding upstream 199778 30150151 ~ 30215590 (-)
G55550 LOC107747660 non-coding upstream 339561 30289934 ~ 30290947 (-)
LOC103046862 LOC108410878 other downstream 12259 29896515 ~ 29934430 (-)
kiaa1671 NA other downstream 105936 29744028 ~ 29840753 (-)
LOC103031600 lrrc75ba,LOC108414797,LOC107753104,LOC107712478,LOC105891565 other downstream 1346179 28554727 ~ 28600510 (-)
LOC111192657 NA other downstream 1522734 28417733 ~ 28423955 (-)
G55023 cunh5orf51,clg13h5orf51,LOC103038767,LOC107667559,LOC107686395,LOC106585203 other downstream 1789240 28153421 ~ 28157449 (-)
LOC103027498 LOC108411246,LOC106585447 other upstream 1685108 31635481 ~ 31690808 (-)
LOC103043418 arpc5la,arpc5l,LOC108411248,LOC107571143,LOC108265305,LOC107550963,LOC107753090,LOC107676626 other upstream 1781091 31731464 ~ 31740221 (-)
LOC103021360 LOC108440818,LOC107659619,LOC108265551,LOC107726210,LOC107553829,LOC107684495 other upstream 2821654 32772027 ~ 32802160 (-)
LOC103023237 NA other upstream 3198701 33149074 ~ 33177650 (-)
LOC103038119 LOC108412501,LOC107754395,LOC107671045 other upstream 5140357 35090730 ~ 35108420 (-)

Expression


Co-expression Network