unc119b (unc119b,unc119.1,LOC107753165,LOC107712459,LOC107550938,LOC107687994)


Basic Information

Item Value
gene id unc119b
gene name unc119b,unc119.1,LOC107753165,LOC107712459,LOC107550938,LOC107687994
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 28716975 ~ 28728007 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247136.3
ctgaATCAAGTGTGTCGACTCGTTGAAGAGTCGAACATCACGCTTAAAAGACGGACAGACGGAGCTAGGCGCTGCAAAGGAAAACACAAACCCAGACCGGATCATGAGCGCTCCAAGATCGCGACACGAACCAGCGGCCTCCGCTGTTACCGGGCCGGACTCCTCCGGTGATAGGAAGCCGGGTGGAGGCGCGTTGAAGCGGCTCAAACCCCGACGGAGTCAGGCGGACCGGCGGCCCGCTACCGAGGAGGAGCTGCGCGGTCTGGGGAGAGCCATCACACCGGAGGAAGTGCTGGGGCTTCGGGCAGTCACTCGGGATTATCTGTGTAAGCCCGAGGACAATGTGTACAACATTGATTTCACACGCTTCAAAATCAGAGACTTGGAGACAAGCACAGTGCTGTTCGAGATCGCCAAGCCTCCACACTGTGATTTGGACGAGGAAGATGAGGAAAATGTAGATGTGGACACAAGCGCTGGACGTTTTGTTCGATATCAGTTCACTCCAGCATTTCTAAAACTGCGCACAGTTGGAGCAACtgtcgAGTTTACTGTAGGCGATCGGCCTGTGAACAATTTCCGGATGATTGAAAGACACTATTTTAAGGACCGCCTTCTGAAGAACTTCGACTTTGATTTTGGTTTCTGCATCCCAAACAGCCGCAACACCTGTGAGCACATCTATGAGTTCCCACAGCTCCCAGAAGACCTCATTCGTCAGATGGTGGAGCACCCATATGAGACGAGGTCAGACAGCTTCTACTTTGTGGATAACAAACTCATCATGCACAACAAAGCAGATTACGCTTACAATGGAGGCCAATGATGCTACTGAAGAGTTCAGAGCGTACTTGTGAATGTGTATGAGcgaacgagtgtgtgtgtgtgtgtatgtgtgtgtgtgtacggtaTAACAATAGGACCACCCCTTCACTATAAACATGTCcatctttctctcacacactcctgctCAGTAACTGGACAGCGTATCCCAACCTTTTTATTCCACTCACTGCCTTCACTGCCGAAGACCGGAACCACTCGCCTCCTCCTGCTCCATACACTTTGCTCATATTGAGGAATTATTTATACCTCACACCCACCACTGTGTGGGACCCACATTAGAAACAACTTTTCTAGCAGGTCATCTCCTTCCATCCTACATTACGTTTGGCTTTAGCTGTGGAGTCATGAACTTCTGTTACTTTTCATATGGGCAGTAGAGAATGAACAGCTCAAATTAGCatcaatgttttcttttctctgaTCAGATCTGCTTGGTTTAGCGTGCCTTCTCTAAGCCCCACTCACTTATGTGACAGTGAAGCATCAATAACTACGGAAGAACATAAGTGGGTGGAGTCTGGAGAGGTCAAGTAGTATGGAAACGGTCTAAACAGAATTGAGCTGACTGATAGATTTGTTCTTGCTCTAGACTTGAGCacaggtgtgtgttttggtATAATGTCATCTTTCTTATATTTACTTCTCACTCtgcatatttttaatgtttaacctTGTTTTAAGACACCTATTCAGAGCCAATGAATGGTGTTAATAATCTGATATGTGATAAGTTTTTAGAAGACAAATATCAACAGAGTTTAATCGAtttatgcactaaatattacatATCAAGAAGTCAAAAAGTAAAGGAACTAAGTTTAGTTTCTTGGCGTTTATCATTAACCGTGTGAAAATAAAAGGCTGTGTCTACACAGCAGATTTCCACACCTCACACTGCTCCAATTTCACATGGCTAATGCTAAGAAAACCAGGCCATCAGACTGCATTCTCCAGGCATGGAGACTGTAGAGATAAGAGCTGGGCTTAGCTTGCATTTTCGAAGGTATATTTCAGGGTTTTCTTAGTCAAATAAAGCACCTGACCAGTCATTTGCATTATATGTCAGTGAATTTTGagaagtgttctttaaggcCAGGAACATGTGTATAAATTACAGTTTGTTTAAATAGACTTAACACTACAGAGAGAGTGCTTATGGACTGGGGTGAAATCTTTTAAAGCCTCAGGAAAAAGGGTTTCTTAAAACATAATTTGCCAAAATACGCACCTCTGCACCCTTTAGCTAAGTAGCAGTATTTTTCTAGTGCAAGCTAACAGCTATCCTAGGTTTCAaaatgctagctagcttgctaggtATAAAATTTTGCATAGTGCTAGCATGCTAATTTGAAGATTTTTGAAGTTTTACCAAAAGCAgatcagagattttttttttcattttatcctCTCTCAGTGCTGTTGTGTAAATGTTTTGCAGACGTTTAGTGCTGGTTTTTAGGAGTTTTTCTGGTATTTTCCAACCTCTCTCTGAGTACTTATCTCAGGGAGCTTGGGCTCCATCTGTGTTTGACGTTTGTGAGTGCCCTTAATGTCAAAGACATCTGtcggttttttttattttctgtgttttttccctCACTTGTGCTGATTTAGTGTCTAATGCAGAAGTTTAGCTGCTCAGAACATCCACATTATGCCCAGTTTACAAAAGCTAAAACAGACTAGCGTCATGCACAGGGTATCTTAGCATGGTACCTTAGCAGGTGCTATCCACCTTAAATCTAGTCAGTTCCTCTAGTATTTCTTACTCTTTCTATACATCTTAAGTCGATTTAATCAAGTTTGATTAGAAGACCATATTGCTAAATTCACATGCATATCTAAACTATCTCATAATGagaaataatataaagttatttaaactTGATAAAGAGGATTTTACTTGACGGTCAATTTCTGCAGTGTGGTGAGCTGCAATGGCCACTGTTATTGTCAAAatgattcattttaaaacagaggCGCATGTAAACTGTTTTAGCGAGCTAATTTCACTAGCAGTGCTTTTCCCCGGTTTGTTATTCTGAGCTGTAGTTGTCTTTTGACTGTTATCTATTTACTCTTTAAAAGAATGGCCTACGTTttggctaatgttgctaacgtTAAATGGaactaagcaaccacttagcattatttttttttgtgtcatgtTAGCTGGCGGCtgcttatttttaatgtattgtcAGCAGAAATAGCTTTTTGACTGAAGCAATCCCTTAAGATACAGGTGTAAATGCATGctatttttattcctttttttgtgtgtgttttagtgagaGACCTTTTCCGTTGTTCTACATGACACTAAAATTTGAATCGAATGAAATCAGGGGTGAATCGTAGTTCACAGATTTTTAAGAGATGGTAGGGTGAGCATTGCtttgaacgttttttttttttttctttcgttcactcttcttatattttatttgaacagTGCTTTTTGAAAACTGAATCTgttctctgttgtttctgaagTGTCCTTAAAACAAACAGGGTGTCCAGTCGGTCATTCTTTGCTGTAGGGCTGTCGTACGTGATGGACAaaattttgcatatttttaacACGGTATTGACTCAATAGTGTGACCTGGTTTCAAAGTGGACTTCCaacatttttttccacatttctcTATATAGTTCAATGTTTGAAATGAACACATGAAGAGTGGATTATGCTTCAACACAGAGGAACTTACTGACTTAGAATTCTTTACAGTAGGGGTGATAACCACAGCAGAACTCAagcctttttatttactttctaaacCCATCAGTTAACAACAAACTCTAAGGAAAGTCTGTTCACTCTGTTCATCAATGCAAAGCTGTCAGTCAGTTATCTCTAGTTATATGAGACCAGCCTCCCATTTCTTTGAACGGAGAAAgaccaaaatactggaaactaCGTCAAATTAGGTCAAATTACGGTTTTATGAACAAATTTTAGgagaaaatatgataaaaccctcattaaccctttcagaccctgtatCAATTACAGTGGACATCATTTAGTTACCTTTTTCAAAttctgttgtccatcagaatagatcataaatcagccaatgaaacagtagtttaaccccgcccactgcactggacaaaaaaaaaaaaaacacaaacaaatcagACATTAGGGCATGTTGGCACTacaaaacaaatgagacaagctcattttttgtgattttgaaCATTTTGTAATCATGTTTAGTTATTTGGATTtgttttaatatagattttatattaggaaagtagtgtcttattttgtgtgcattacagacagacaaCAGCATTCATATATTTATCTGAAACATCATTcatgtctgaaagggttaatcctTTGCAGGATTGTAATTGTTTTggcactctctcactctgtgaATGTTATTTTTACATGATTGCAAATATCAGTGTCATCATGATACCTGTTCTAAATACCACAACCCTGCAGCAAAGGTAATATACAGAGAAACTCAGGCCGAATTTGTAGCTGTCAAATAACAATCATAATAATCTTAACAGTAATCCTAGGAGTAGTGCTGGCTGGACGGGATTCGGTTCTTAGGGGACAAGAAAAATTTCACACTTctgctcagtgataaaactcttgcatccggactgcaattgaaaaaacaggaggaccagtgagttttttttttttttggcttgctCAGTCACATAatatcatgttcagtagctcctccatttccactcactgttgtgtttatgtggatctctgtggaaacgcatGCTCAATGTAAATTTACGGTGcttagcagtggacaaatagctattttattaaaaactcaaaactggcaaaactcagagatgtggatctggacaggactaaaatcgCCAGTTCAGCGAAAAACTGTAGTTAAATCAGCATGTAATTTTCTcaaaggacgtctgagaaaaacacagacatggtcgatctggatgggaataaaatcacagaggaccaaCCCCTAAAAGAGAAAGTTACCCCAGGACCCCAttagaaactaatcctgtccggatagggggACTTTGGGTATTTtattatcatatatttttaactggTTTGCCAAATTTCAGCTAAATCTTGTTTATATCAGTTACCTGCTCACTACACTTCATGCACAAGATGAGCTCTAAAAACAGACCCATCTTTACATTAAAATAGTCATTTTGTCACTTAACTAAGTAAGATTTCATCTTTTTCAGGGACCCTCTCAGCTCCTCTCATTGGTTACTCACTTTAATAGCTTGGTTTCTAGGATGGCAGCCCACAACCAAGTTGTTTGTCACTCTATTTACATAGAAATGCGGTTTGTTAGTGTTGCCTGTTTCTTATAAATAAACTGGaaaatgagtgttttttttttatatatgctgaagaacatattttttttttctgccttacattttctcaatctttgttggtttttgttttgttgttttgtcttACTTTGTTGTTGGTGATGATTCCTGTATCAGgactttaaatatctaaatcCTTACCAACCCCAGGAGCTATTACTCACAAACTCCCAGCAGATCAGATCATGAACGCAGTGTACGATGACAAGGGCTCGCAGATGTGGCGTTTCCGTTACAGGTTACTGAAGTTATGAATTCTTGTGGAAAAGCAGATCCCGACTCAATCCCAATATTGACCAGTTTAGTGTTTACCAGACACGCCCAATCTGTCAGCTGATTGTATGCCCACATGGAGGAAAAATGCAAATACATGTTGCAGTgtatgaaaatgtctttaatgtTTGTAccaatttttaaaatacattcacTGTTCTATATGTGAAGAAAAGTCatgatttttacatttgaaaaatattttgtctttGAGGTGCTTCAcatcttaaaaagaaaataaaatttaaaacatttatatttgagagagaaaaaaaaagatgtttatcCTGAAAAAGGAGACACAGacgtttatatttaaaaaaagtcttgTCCTAAAAACCTCAACATGTGAAAATTGAAAATTGTgatttgtatatatgttttaaattttatgtttatctcataggaatacaaaaaaaacttttatattttggggaaaaatataaaaaaaaaagaagtcataacttttacttgaaaaaaatgttatctcatgaaaaaaacaaaagtcatgactgttatattaaaaaaaagaaagataaaatataagTCATGAGTTTTATGGTGTGGCAAAAAAACTGAGAACACTTAAAAAGTTATAactatataaaagaaaaaaaacactaaaccctGCCTGTGCAAGATGACAAACATTGTCTTACCTTCTTTGTACTGTTGGAATGAAGTTATGCCCATATTCTTctttattcatagttttatcAAAATTGTATTAGCGAAGTTCACATTAGAACTTCAGCTGTCAGTTGGATTGACTTTTGTGTGAATTCTggttatttcttaaaaaaagggaataaataaataaaataaaacacatttcattaCAAGCTG

Function

symbol description
unc119.1 Predicted to enable lipid binding activity. Involved in cilium assembly. Acts upstream of or within Kupffer's vesicle development and nervous system development. Predicted to be located in cell projection. Predicted to be active in cilium. Is expressed in several structures, including mesoderm; nervous system; neural plate; pronephric duct; and spinal cord neural tube. Orthologous to human UNC119B (unc-119 lipid binding chaperone B).
unc119b Predicted to enable lipid binding activity. Acts upstream of or within Kupffer's vesicle development and visual perception. Predicted to be active in intercellular bridge and microtubule cytoskeleton. Is expressed in several structures, including adaxial cell; nervous system; pronephros; solid lens vesicle; and spinal cord neural tube. Human ortholog(s) of this gene implicated in immunodeficiency 13. Orthologous to human UNC119 (unc-119 lipid binding chaperone).

NR:

description
PREDICTED: protein unc-119 homolog A

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0070121 Kupffer's vesicle development biological_process
GO:0060271 cilium assembly biological_process
GO:0007399 nervous system development biological_process
GO:0005929 cilium cellular_component
GO:0008289 lipid binding molecular_function

KEGG:

id description
K23539 UNC119; protein unc-119

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247136.3 True 6348 mRNA 0.38 5 28716975 28728007

Neighbor

gene id symbol gene type direction distance location
mlec mlec,LOC107687973,LOC107554429,LOC107703166 coding upstream 2984 28703345 ~ 28713991 (+)
cabp1 cabp1,cabp1a,LOC108415942,LOC107712460,LOC107550936,LOC107687995 coding upstream 20000 28670690 ~ 28696975 (+)
LOC103031919 ggt1,LOC105891568,LOC107753164,LOC107550935,LOC107554426,LOC107712477,LOC107703144 coding upstream 100530 28602070 ~ 28616445 (+)
gpx8 gpx8 coding upstream 210746 28503352 ~ 28506229 (+)
anapc5 anapc5,LOC107687977,LOC107703168 coding upstream 215191 28493576 ~ 28501784 (+)
c6h12orf43 NA coding downstream 1407 28729414 ~ 28733421 (+)
LOC103026907 NA coding downstream 47623 28775630 ~ 28787383 (+)
LOC103028136 NA coding downstream 62393 28790400 ~ 28794659 (+)
LOC103025277 LOC108413761 coding downstream 158463 28886470 ~ 28890378 (+)
crybb2 crybb2,LOC108265494,LOC108410876,LOC108234953 coding downstream 1015142 29743149 ~ 29747471 (+)
G55205 NA non-coding upstream 1015 28715239 ~ 28715960 (+)
G55151 NA non-coding upstream 98599 28617866 ~ 28618376 (+)
G55134 NA non-coding upstream 155743 28523937 ~ 28561232 (+)
LOC111192729 NA non-coding upstream 181855 28533419 ~ 28535120 (+)
G55112 NA non-coding upstream 191127 28524391 ~ 28525848 (+)
G55211 LOC108412053 non-coding downstream 4307 28732314 ~ 28770098 (+)
G55214 LOC108412048 non-coding downstream 9590 28737597 ~ 28746491 (+)
G55229 prkab1,prkab1b,LOC108412051,LOC107554438,LOC107753114,LOC107687987,LOC107703154 non-coding downstream 66846 28794853 ~ 28804271 (+)
G55232 NA non-coding downstream 77699 28805706 ~ 28807464 (+)
G55235 NA non-coding downstream 96184 28824191 ~ 28825643 (+)
asphd2 asphd2,LOC107687974,LOC107703165 other upstream 60157 28646064 ~ 28656818 (+)
ipo11 ipo11 other upstream 778586 27814215 ~ 27938389 (+)
G54841 NA other upstream 1004397 27703772 ~ 27712578 (+)
LOC107197454 NA other upstream 1048313 27663782 ~ 27668662 (+)
LOC103030972 LOC108430356 other upstream 1494108 27211302 ~ 27222867 (+)
G55218 NA other downstream 26023 28754030 ~ 28754817 (+)
G55502 NA other downstream 1619009 30347016 ~ 30625046 (+)
G55532 cgnl1 other downstream 1800855 30528862 ~ 30550061 (+)
G55831 LOC107691557,LOC108411168 other downstream 3192813 31920820 ~ 31924095 (+)
G55844 adam9,LOC107591921,LOC107702867,LOC107722987 other downstream 3246674 31974681 ~ 31977419 (+)

Expression


Co-expression Network