dhx37 (dhx37)


Basic Information

Item Value
gene id dhx37
gene name dhx37
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 27164267 ~ 27181242 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247189.3
GAACGAGTCGGCGTCATTACCGGGGAGCACCCGCTGCCCTGAACCACACGTGAGTTTACATTGGAAACGTGAAACTGGTTAAAAGAGCGAACTGGTGAAGAAAGAACAGCAGTACAGttttCAGTCATGGGGAGACTGCGAAAGAAACACAACTGGAAAGGGAGGCAGCAGAATGAAGCCAAACCTGCACCTACAGAGCTGAAGGAGTCTGATGTGATGGTGGAAGTAACAGACTATGCTGGTCTAAAAGGAGTGGATGAAAGCAATGCTCTCGTTCTCCCAGCCACCAAAGCTAAGAAACAGAAGGTTCAGCAGCAAGTCAATAAGAAAAAACCTCTTACCAAGAAACAGAGGAAGAACCTGGAGAAAGTTCTagagcagaaagagaagaaagctaatCGAGCAAATATCTTAAATAAACTGTCAGAAGTTCAGCTGCCAGAAACTGAACTGAAGCTGCTTTACACATCCTCCAAACTGGGCACTGGAGACAAACTCTTTGAAATTAAAACgtCTCTTGATGAGAGCCAGGACGACAGTTCAGCTCCTTTCAAAATCAGCAGTCTGAGTGGCGctaacagaaagagaaagagaagaagagcagATGAAGATCAGGATGAAAGTGAAGAAGAAGACTCTTCTGCCGAGAAGATGAATGAAGCCTCTGACTCATCTTCAGAGGATGAGATGGACGAGGAAGAAGACGGTTCAGAAAAGGAAACACTTGCAGAAAAGGTGGAGGAgcaaaaggaggaggagaaacagACTGTAGTAGAacagaaggaggagaagaaagagagtaatgaaaaaaaatcaaaacaagcTTTGCACAAGAAAGGGGAGTGCAAGCCTGCTGTGTTCATCCCGGTGGACAGACTGCCTGAGATACAGGAGGCTCGGCTGAAGTTGCCAGTTCTGGCTGAGGAGCAGGTGATCATGGAGGCAGTGAGGGAGAATGAATCTGTAGTGTTGTGTGGAGAAACAGGCAGCGGAAAAACTACACAAGTTCCACAGTTCCTCTATGAGGCTGGATAtgccagTGCTGGTAGGATTATTGGTGTGACTGAACCCAGGAGAGTAGCAGCTGTCAGCATGTCTCGCAGAGTTGCTAAAGAGATGAATCTCTCCACAGGGGTGGTGTCGTATCAGATCAGATATGAGGGAAATGTCACTCAGGACACCAAGATCAAGTTCATGACGGACGGTGTCTTGCTGAAAGAAATTCAGAGGgACTTCCTGTTGCAGAAGTACAGTGTGATTATAATTGATGAGGCTCATGAGCGTAGTGTGTACACAGACATCCTCATTGGCCTGCTCTCGCGAATCGTACCGCTCCGCAACAGGAAAGGTTTACCCATGAAGTTGCTGATCATGTCGGCTACACTGCGAGTGGAGGACTTCACAGAGAACAAGAGACTGTTTCGCACTCCTCCTCCAGTCATCTCGGTGGAGGCTCGTCAGTTCCCAGTCTCTGTTCACtttaacaaacaaacaccaaTGGACGATTACACAGGAGAGGCCTTCCGCAAAACATGCAAGATTCACCGCATGCTGCCTCCAGGTGGTATCCTGGTGTTTCTAACTGGCCAAGCTGAGGTTCACACTTTGTGCAGGAGATTAAGGAAAGCTTTTCCCTACAGAGCCAGCTCACAAACTGATGCCGAGGACCCATCAGAGGAACTCAGAAAGTccaagaaagcaaaaaagaagaaatttgTGTCTCTTCCTCGGATAGACCTGGATAACTACTCTGCTCTGCCTGTGGATGAGGGTGATGAAGATCGGCAGGCTGGCATTGATGACGACAGTGATGAAGGGTCTGACCTGGACCTGGATTTAGGAGATAACCCGGATGACACGGTGGAAGAGGCtgatccctccatccctctgtACGTACTGCCTCTCTATTCACTCCTGGCACCAGAGCAGCAGGCTAAAGTGTTCCGTCCACCTCCTCCAGGAGCTCGTTTGTGTGTGGTTGCCACTAATGTGGCCGAGACGTCTCTCACTATTCCGGGTGTTAAGTACGTGGTGGACTGTGGCCGGGTGAAGAAGAGATTCTACGACAGAGTGACGGGAGTCTCCTCCTTTAAGGTCACCTGGATTTCACAggcctcagccaatcagagagctgGGAGAGCCGGAAGAACAGAGTCAGGGCACTGCTATAGGCTCTACTCCTCTGCAGTTTTTGGGGATTTCAGCTTGTTCTCTGAGGCTGAGATCACTCGACGACCGGTCGATGACCTCGTCCTTCAGATGAAAGATCTCAACATTGAGAAGgTAGTGAACTTCCCGTTCCCTACTCCACCCTCCTCTGAAGCACTGGTGGCTGCTGAGCAGCTGCTGGTCTCTTTGGGAGCTCTGGAGGAACCGCCTCGCCAGGGACGGATGGTGGATCAGAAGAGGGCTCGTCTCTCTTGCCCTATAACCCCTCTGGGTCGAGCAATGGCAGCGTTTCCTGTTTCGCCACGCTACGCTAAGATGCTAGCGCTGGGCCGCCAGCAGGGCTGCATGCCCTACATCATTACTATTGTGGCAGCCATGACAGTCAGAGAGATTTTTGAAGAACTTGACAGACCTGCCAGCAGTGAGGAGGAGAGCAGTAAGCAGGCTTCCAGAAAAGCTCGCTTCAGCCAGATGAGGAGACTGTGGGCAGGGCAGGGTCAGTCTTTACTGCTGGGAGACCTCATGGTGATGCTTGgtgCTGTAGGGGCATGCGAGTTTGCTGGCTGCACATCAGCTTTCTGTGAGGAGAACGGTCTTCGATACAAAGCTATGCTGGAGATACGACGGTTACGGGGGCAGCTTACAAATGCAGTGAATGCTGTGTGTTCAGATGCAGCAGTATGTGTGGATGGCAAAATGGCTCCCCCTACTGAGTCTCAGGTGGTGTGTCTGAGGCAGATTGTGCTGGCAGGACTGGGTGATCATCTGGCCAGAAGAGTTCAGGCTGAGGAGCTGCTGGATCcaaaatggagaaacggctacAAGACTCCCCTGCTGGATGAGCCTGTGTTTATCCACCCTTCCTCTGCCCTTCACAAAACCCTACCAGAGTTTGTTGTCTACCAGGAAGTTATGGAAACCACTAAGATGTACATGAAAGGCGTGTGTGCAGTGCAAGCCGATTGGATCCCGAAGCTCCTCCCACAGTATTGCCACTTCAGTGGACCAGAACAGAACCCCGCCCCGTGGTACTGCCCACTTAGCGGCAAAGTGAAGTGTCAACAACAGAGCACCTTCTTCAGAGTTGCTTGGAAGCTTCCAGCCATAGAAATGGATCATCCAGAAGGTCTGGAGCAATACAAACTGTTTGCCAAGTTTCTGTTGGAGGGACAGGTTTGTCCTAAGTTGCAGCAGTTCAGCACATGTTTACTGTCTACCCCCTCAACAATGCTGAAGACCTGGGCCAAactGCAACCTCGAACTGAATCACTTCTCTCAGCACTGGTGTCGGAAAAAGTCGACAACAGGGATGCCTTACAAGCTGTAtggcagaaaaaagaaaaatTTCTCCTGTCAGCATACTGCCAGTGGATTCCAGAGTCACTTCACCAAGACGTTACGAAGAGTTGGCCTCCTATCTGAGACACACACAATCCTGCCTAACCACCTGTCTTACcttcacacaaaacacacacacacacacaccagccctTTGAACTGTAAACAGAGCTGGTCTCGGAGGATTTATGCCTTTGTAGCCACACAAAGCAGGGCTTCTAAAGACAGCTTCTCCCTGGTCTCTGGTGGGATGGAACCAATgcctttttttctacatttaccagctttttactgtgtatttatttggaCTCACTTTGGACTGAAGATAATGGGGTGGCAACCTAAAGGGCATTTGGACTaattttatgtatgtttatactttgaaaaaagtattgaatcgaatttatttaattcatcatAATTaacttgtttaaatgtgttccTCACATTAACGTAGAGTAAATATTACATCAATGCTACTGGTGGAAGTAGATATGTGACATGTTTGTATAAACAGTTATATGTAGAAATTCTGTAAACATTTCAGTCAAGTAAATTCAGTGCATTACTGTTTTACACAGTTACTGTACTGATGTTGCTCAGTCTTAGTCTCAGACTGTGCCTAATCTCCTATAGTCTGGGTCTGGGATTAGACCTTAGGGTTCAACACCTAAAACACAAGCAGGTGGAGTTTAATTTCAGAATGGACACTTGGGATCTTATCAGCCTTACAACATGCTGtgttgtaaaataaacaaataaacaccttttttaaaattca
>XM_007247190.3
CAGTCACAGTTTATAGTTCAGTTAATCTGAATCAGGATGGCTAAAGGTTTTACAGAGGAAGTTCTGAACAGGGGTAGGAACAGGAACCCTTCCGCTGAGCGTGTGAACGAGTCGGCGTCATTACCGGGGAGCACCCGCTGCCCTGAACCACACttttCAGTCATGGGGAGACTGCGAAAGAAACACAACTGGAAAGGGAGGCAGCAGAATGAAGCCAAACCTGCACCTACAGAGCTGAAGGAGTCTGATGTGATGGTGGAAGTAACAGACTATGCTGGTCTAAAAGGAGTGGATGAAAGCAATGCTCTCGTTCTCCCAGCCACCAAAGCTAAGAAACAGAAGGTTCAGCAGCAAGTCAATAAGAAAAAACCTCTTACCAAGAAACAGAGGAAGAACCTGGAGAAAGTTCTagagcagaaagagaagaaagctaatCGAGCAAATATCTTAAATAAACTGTCAGAAGTTCAGCTGCCAGAAACTGAACTGAAGCTGCTTTACACATCCTCCAAACTGGGCACTGGAGACAAACTCTTTGAAATTAAAACgtCTCTTGATGAGAGCCAGGACGACAGTTCAGCTCCTTTCAAAATCAGCAGTCTGAGTGGCGctaacagaaagagaaagagaagaagagcagATGAAGATCAGGATGAAAGTGAAGAAGAAGACTCTTCTGCCGAGAAGATGAATGAAGCCTCTGACTCATCTTCAGAGGATGAGATGGACGAGGAAGAAGACGGTTCAGAAAAGGAAACACTTGCAGAAAAGGTGGAGGAgcaaaaggaggaggagaaacagACTGTAGTAGAacagaaggaggagaagaaagagagtaatgaaaaaaaatcaaaacaagcTTTGCACAAGAAAGGGGAGTGCAAGCCTGCTGTGTTCATCCCGGTGGACAGACTGCCTGAGATACAGGAGGCTCGGCTGAAGTTGCCAGTTCTGGCTGAGGAGCAGGTGATCATGGAGGCAGTGAGGGAGAATGAATCTGTAGTGTTGTGTGGAGAAACAGGCAGCGGAAAAACTACACAAGTTCCACAGTTCCTCTATGAGGCTGGATAtgccagTGCTGGTAGGATTATTGGTGTGACTGAACCCAGGAGAGTAGCAGCTGTCAGCATGTCTCGCAGAGTTGCTAAAGAGATGAATCTCTCCACAGGGGTGGTGTCGTATCAGATCAGATATGAGGGAAATGTCACTCAGGACACCAAGATCAAGTTCATGACGGACGGTGTCTTGCTGAAAGAAATTCAGAGGgACTTCCTGTTGCAGAAGTACAGTGTGATTATAATTGATGAGGCTCATGAGCGTAGTGTGTACACAGACATCCTCATTGGCCTGCTCTCGCGAATCGTACCGCTCCGCAACAGGAAAGGTTTACCCATGAAGTTGCTGATCATGTCGGCTACACTGCGAGTGGAGGACTTCACAGAGAACAAGAGACTGTTTCGCACTCCTCCTCCAGTCATCTCGGTGGAGGCTCGTCAGTTCCCAGTCTCTGTTCACtttaacaaacaaacaccaaTGGACGATTACACAGGAGAGGCCTTCCGCAAAACATGCAAGATTCACCGCATGCTGCCTCCAGGTGGTATCCTGGTGTTTCTAACTGGCCAAGCTGAGGTTCACACTTTGTGCAGGAGATTAAGGAAAGCTTTTCCCTACAGAGCCAGCTCACAAACTGATGCCGAGGACCCATCAGAGGAACTCAGAAAGTccaagaaagcaaaaaagaagaaatttgTGTCTCTTCCTCGGATAGACCTGGATAACTACTCTGCTCTGCCTGTGGATGAGGGTGATGAAGATCGGCAGGCTGGCATTGATGACGACAGTGATGAAGGGTCTGACCTGGACCTGGATTTAGGAGATAACCCGGATGACACGGTGGAAGAGGCtgatccctccatccctctgtACGTACTGCCTCTCTATTCACTCCTGGCACCAGAGCAGCAGGCTAAAGTGTTCCGTCCACCTCCTCCAGGAGCTCGTTTGTGTGTGGTTGCCACTAATGTGGCCGAGACGTCTCTCACTATTCCGGGTGTTAAGTACGTGGTGGACTGTGGCCGGGTGAAGAAGAGATTCTACGACAGAGTGACGGGAGTCTCCTCCTTTAAGGTCACCTGGATTTCACAggcctcagccaatcagagagctgGGAGAGCCGGAAGAACAGAGTCAGGGCACTGCTATAGGCTCTACTCCTCTGCAGTTTTTGGGGATTTCAGCTTGTTCTCTGAGGCTGAGATCACTCGACGACCGGTCGATGACCTCGTCCTTCAGATGAAAGATCTCAACATTGAGAAGgTAGTGAACTTCCCGTTCCCTACTCCACCCTCCTCTGAAGCACTGGTGGCTGCTGAGCAGCTGCTGGTCTCTTTGGGAGCTCTGGAGGAACCGCCTCGCCAGGGACGGATGGTGGATCAGAAGAGGGCTCGTCTCTCTTGCCCTATAACCCCTCTGGGTCGAGCAATGGCAGCGTTTCCTGTTTCGCCACGCTACGCTAAGATGCTAGCGCTGGGCCGCCAGCAGGGCTGCATGCCCTACATCATTACTATTGTGGCAGCCATGACAGTCAGAGAGATTTTTGAAGAACTTGACAGACCTGCCAGCAGTGAGGAGGAGAGCAGTAAGCAGGCTTCCAGAAAAGCTCGCTTCAGCCAGATGAGGAGACTGTGGGCAGGGCAGGGTCAGTCTTTACTGCTGGGAGACCTCATGGTGATGCTTGgtgCTGTAGGGGCATGCGAGTTTGCTGGCTGCACATCAGCTTTCTGTGAGGAGAACGGTCTTCGATACAAAGCTATGCTGGAGATACGACGGTTACGGGGGCAGCTTACAAATGCAGTGAATGCTGTGTGTTCAGATGCAGCAGTATGTGTGGATGGCAAAATGGCTCCCCCTACTGAGTCTCAGGTGGTGTGTCTGAGGCAGATTGTGCTGGCAGGACTGGGTGATCATCTGGCCAGAAGAGTTCAGGCTGAGGAGCTGCTGGATCcaaaatggagaaacggctacAAGACTCCCCTGCTGGATGAGCCTGTGTTTATCCACCCTTCCTCTGCCCTTCACAAAACCCTACCAGAGTTTGTTGTCTACCAGGAAGTTATGGAAACCACTAAGATGTACATGAAAGGCGTGTGTGCAGTGCAAGCCGATTGGATCCCGAAGCTCCTCCCACAGTATTGCCACTTCAGTGGACCAGAACAGAACCCCGCCCCGTGGTACTGCCCACTTAGCGGCAAAGTGAAGTGTCAACAACAGAGCACCTTCTTCAGAGTTGCTTGGAAGCTTCCAGCCATAGAAATGGATCATCCAGAAGGTCTGGAGCAATACAAACTGTTTGCCAAGTTTCTGTTGGAGGGACAGGTTTGTCCTAAGTTGCAGCAGTTCAGCACATGTTTACTGTCTACCCCCTCAACAATGCTGAAGACCTGGGCCAAactGCAACCTCGAACTGAATCACTTCTCTCAGCACTGGTGTCGGAAAAAGTCGACAACAGGGATGCCTTACAAGCTGTAtggcagaaaaaagaaaaatTTCTCCTGTCAGCATACTGCCAGTGGATTCCAGAGTCACTTCACCAAGACGTTACGAAGAGTTGGCCTCCTATCTGAGACACACACAATCCTGCCTAACCACCTGTCTTACcttcacacaaaacacacacacacacacaccagccctTTGAACTGTAAACAGAGCTGGTCTCGGAGGATTTATGCCTTTGTAGCCACACAAAGCAGGGCTTCTAAAGACAGCTTCTCCCTGGTCTCTGGTGGGATGGAACCAATgcctttttttctacatttaccagctttttactgtgtatttatttggaCTCACTTTGGACTGAAGATAATGGGGTGGCAACCTAAAGGGCATTTGGACTaattttatgtatgtttatactttgaaaaaagtattgaatcgaatttatttaattcatcatAATTaacttgtttaaatgtgttccTCACATTAACGTAGAGTAAATATTACATCAATGCTACTGGTGGAAGTAGATATGTGACATGTTTGTATAAACAGTTATATGTAGAAATTCTGTAAACATTTCAGTCAAGTAAATTCAGTGCATTACTGTTTTACACAGTTACTGTACTGATGTTGCTCAGTCTTAGTCTCAGACTGTGCCTAATCTCCTATAGTCTGGGTCTGGGATTAGACCTTAGGGTTCAACACCTAAAACACAAGCAGGTGGAGTTTAATTTCAGAATGGACACTTGGGATCTTATCAGCCTTACAACATGCTGtgttgtaaaataaacaaataaacaccttttttaaaattca

Function

symbol description
dhx37 Predicted to enable RNA binding activity. Acts upstream of or within positive regulation of mRNA splicing, via spliceosome. Predicted to be active in nucleolus. Human ortholog(s) of this gene implicated in 46,XY sex reversal. Orthologous to human DHX37 (DEAH-box helicase 37).

NR:

description
probable ATP-dependent RNA helicase DHX37

GO:

id name namespace
GO:0048026 positive regulation of mRNA splicing, via spliceosome biological_process
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K14780 DHX37, DHR1; ATP-dependent RNA helicase DHX37/DHR1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247189.3 False 4288 mRNA 0.48 28 27164371 27181242
XM_007247190.3 True 4324 mRNA 0.48 28 27164267 27181242

Neighbor

gene id symbol gene type direction distance location
gp1bb gp1bb coding upstream 3701 27155544 ~ 27160566 (+)
sept5 sept5,LOC107713038,LOC102226618 coding upstream 22651 27120811 ~ 27141616 (+)
LOC103046559 LOC108430351,LOC103046559,LOC108265487,LOC105014311 coding upstream 45567 27076367 ~ 27118700 (+)
cdc45 cdc45,LOC107699634,LOC107670985 coding upstream 104925 27050304 ~ 27059342 (+)
ciao1 ciao1,LOC106579887,LOC107714582 coding upstream 122729 27036124 ~ 27041538 (+)
LOC103044927 LOC108430355 coding downstream 7152 27188394 ~ 27206043 (+)
cux2 cux2 coding downstream 78640 27259882 ~ 27457190 (+)
mtmr3 mtmr3 coding downstream 298177 27479419 ~ 27504808 (+)
LOC103042580 NA coding downstream 488818 27670060 ~ 27679690 (+)
LOC111192709 NA coding downstream 508470 27689712 ~ 27708708 (+)
G54735 NA non-coding upstream 6619 27156946 ~ 27157648 (+)
G54693 ufd1l,LOC106585051,LOC106580431 non-coding upstream 115184 27046146 ~ 27049083 (+)
G54686 es1,LOC108430344,LOC107553036,LOC107671040,LOC107552194,LOC107714552 non-coding upstream 144073 27019061 ~ 27020194 (+)
G54683 NA non-coding upstream 193385 26969363 ~ 26970882 (+)
G54673 NA non-coding upstream 196080 26935930 ~ 26968187 (+)
G54747 pptc7a,LOC103044306,LOC108430358,LOC107552188,LOC107553043,LOC107699657,LOC107671007 non-coding downstream 45208 27226450 ~ 27236132 (+)
LOC111192651 NA non-coding downstream 536733 27717975 ~ 27719836 (+)
G54929 NA non-coding downstream 590282 27771524 ~ 27802691 (+)
G54938 NA non-coding downstream 607755 27788997 ~ 27796308 (+)
G54941 NA non-coding downstream 648865 27830107 ~ 27830766 (+)
G54690 tmem127,LOC107552193,LOC106579884 other upstream 129329 27032835 ~ 27034938 (+)
G54682 es1,LOC108430344,LOC105894898,LOC107553036,LOC107671040,LOC107713034 other upstream 141376 27020244 ~ 27022891 (+)
LOC103023473 tmem230,ct030,LOC103023473,LOC106579885,LOC107713020,LOC101077900,LOC105894893,LOC107553029 other upstream 191241 26962892 ~ 26973026 (+)
LOC103040153 cdc14b,LOC108265480 other upstream 612697 26537052 ~ 26551570 (+)
srp19 srp19 other upstream 1614773 25545992 ~ 25549494 (+)
LOC103030972 LOC108430356 other downstream 30060 27211302 ~ 27222867 (+)
LOC107197454 NA other downstream 482540 27663782 ~ 27668662 (+)
G54841 NA other downstream 522530 27703772 ~ 27712578 (+)
ipo11 ipo11 other downstream 632973 27814215 ~ 27938389 (+)
asphd2 asphd2,LOC107687974,LOC107703165 other downstream 1464822 28646064 ~ 28656818 (+)

Expression


Co-expression Network