LOC103036755


Basic Information

Item Value
gene id LOC103036755
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 42076474 ~ 42077943 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247936.3
CACTTCATCCCGAGGCTTAAACGAAAGTGCGTGTGTGTGGAAAGAGCACGACCAACTACTGCAGCAGAAAAATGGTCTCAGATAGTTTGAGAAAGACGAAAATATCCATTCACAAAAAGGTTTCTAAACCAATGATGGAGAAAAAGAGGAGGGCGCGCATAAACACGTGCTTGGATCAGTTAAAGACTCTTCTGGAAAACATCTACTCAAATAACattAGTAAGCGAAAACTTGAAAAGGCCGACATTTTGGAGCTTACTGTgaaacatctgaaacatcttCAAAAATCCGAGAAAGgTTTGGCCATAAACTCTGGAGGGTCTGAATATCAGTCGGGCTACACGACTTGTCTCGCCAGTGTAAACCAGTATCTTCTCACGGCTGATGCAAACACGGCGAGTAGATCCACCATGCTGGCTCACCTGTCCCGCAGCCTCCTTCGCCTCGGATCGCCGGCCCCAAgtttcagcaccacggacagaGACTGCGCATCATCTCCGCCCTCAAAAAAACAGCGAAGACATGACACCTTATCAACCGGCCATCAAATCTTTACCAAAGACCAAAAGCCTGCACACGGACTCTTCGATCATCACAAACACAATCGTGTTAATCGAAGCTGCAGTGCTCCTGCATCCTTACAACAAAATTACTGGCGCCCTTGGTAACTGGCATTTGCAGATGTATTTAGAGTGTATAGAaattgtttactttttattatagaTATAACTTGCTCTTGTTCATTGCACTAGATCCTATTTTGGATACCTTTTTgtacaaatgtatatttttttaataaaacgaGAAAAAATAA

Function

GO: NA

KEGG:

id description
K09088 HES3; hairy and enhancer of split 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247936.3 True 814 mRNA 0.43 4 42076474 42077943

Neighbor

gene id symbol gene type direction distance location
LOC103027595 NA coding upstream 8545 42062298 ~ 42067929 (+)
LOC103027292 NA coding upstream 17062 42042327 ~ 42059412 (+)
dpp9 dpp9 coding upstream 99426 41948019 ~ 41977048 (+)
LOC103035003 LOC108432140 coding upstream 141902 41910748 ~ 41934572 (+)
plch2 plch2,LOC107691057,LOC107602463 coding upstream 172761 41785640 ~ 41903713 (+)
espn espn coding downstream 353547 42431490 ~ 42532518 (+)
LOC103040839 NA coding downstream 521398 42599341 ~ 42611018 (+)
angptl7 angptl7,LOC107727987,LOC107594962 coding downstream 686060 42764003 ~ 42767588 (+)
trnar-ucg_3 NA coding downstream 760895 42838838 ~ 42838910 (+)
ogg1 ogg1 coding downstream 785010 42862953 ~ 42873055 (+)
G58177 NA non-coding upstream 25365 42050141 ~ 42051109 (+)
G58114 NA non-coding upstream 46420 42010046 ~ 42030054 (+)
G58096 NA non-coding upstream 312896 41758283 ~ 41763578 (+)
G58074 NA non-coding upstream 385086 41691121 ~ 41691388 (+)
G58054 NA non-coding upstream 497426 41578321 ~ 41579048 (+)
G58201 NA non-coding downstream 50247 42128190 ~ 42131034 (+)
LOC111192688 NA non-coding downstream 288189 42366132 ~ 42422813 (+)
G58227 NA non-coding downstream 328254 42406197 ~ 42406592 (+)
G58265 NA non-coding downstream 533706 42611649 ~ 42613559 (+)
G58267 exosc10,LOC107724196,LOC107696929 non-coding downstream 550678 42628621 ~ 42649533 (+)
ndufa7 ndufa7 other upstream 22585 42035839 ~ 42053889 (+)
G58025 NA other upstream 637563 41438027 ~ 41438911 (+)
LOC103032352 LOC103032352,LOC108432100 other upstream 699029 41374689 ~ 41377445 (+)
G57856 tp73 other upstream 1395919 40675040 ~ 40680555 (+)
G57664 NA other upstream 2030007 40044653 ~ 40046467 (+)
G58211 acot7 other downstream 130778 42208721 ~ 42281970 (+)
LOC103040535 arhgef16,ybx1,LOC107595774 other downstream 456958 42534901 ~ 42576703 (+)
G58256 ppih other downstream 499249 42577192 ~ 42626114 (+)
G58529 NA other downstream 1582839 43660782 ~ 43661647 (+)
LOC111192736 NA other downstream 2357915 44435858 ~ 44446503 (+)

Expression


Co-expression Network