LOC103043615 (LOC108432095,LOC108432121)


Basic Information

Item Value
gene id LOC103043615
gene name LOC108432095,LOC108432121
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 43017361 ~ 43029077 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247961.3
ATACAGTGTGGTTATGAACTAAACATAGAATATGATTCAGGCTCTGCTGCAAACATTAAGGGCTTAAACCCCATAAGCGCCCCACAGTTCCCAcacacaatgtgtgtgtgtgtgctatacACCAGTGGCAGTGACCTACAAAGAGTTAGCAAACAACAAGTCCAGGACTGCAGTGATTAGAGAGTAATAAGTAAAGAGGAGGAGATACATCAGCCTGATAAGAATTACAGCAGTGCAGAGCTAAAATCTACAGCCGTGTTTAATCAACTGAGAAccaagaaagagaagaaagcgTGAAGCAAGAAGAGGattttataaaaatacttttatagcCTTTATATCATTATGGATCCTGACTTTCTGTCGTCAATCACTAGACCAGAGGTATATGATTTTGAGGGCGTCTCTATGATTCCCTGCTTTACGATGAACTGGGTGAACATCCAGAAATTCCAGGCCAGACCAGATGACATCCTCATTGCCACTTACCCTAAAGCAGGAACTACCTGGGTATCCTATATTTTGGAACTGCTCTTCTTTAGTAAATTGGGAGCAGAACGTCAGAAGACGATGCCCATCTACATGCGAGTTCCCTTCCTTGAAGGCATTTTTCCAGGGTTACCTACAGGGGTGGAGCTGGCAGATCAGCTGCCCACTTCTCCACGGCTCATCAAAACTCATCTTCCTGTTCAGTTGGTCCCCAAGTCCTTCTGGGAACAGAACTCCAGGGTTGTCTATGTAGCTCGTAATGCCAAAGACAATGCTGTGTCTTATTTTCACTTTGACCGGATGAACAAGGGACAGCCTGATCCCATAGACTGGAGCACTGATCTACAGAAATTTATGGATGGAAAGAAGGTGTTTGGTCCTTGGTATGATCATGTGTGTGGATACTGGGAGAAGAAGCAGAcctactcaaatattcactacaTGTTCTTTGAGGACATGGTGGAGGACACGGGGCGTGAGGTGGAGCATTTGTGCTCCTTCCTTGGTTTGTCTACACCaatagaagaaagagagaggattaCGAAGGGCActcactttgacacaatgaagcTCAACAACATGACCAACTACTCTACAGTTCCAGTCATGGACTTCAACGTTTCTCCATTCATGCGCAAAGGTAAAGTCGGAGACTGGAAGAATCACTTCACTGTGGCTCAGAACGAGCGGTTTGATGAACACTACAAACAGAGGATGAAGAACACCACCCTCCAGTTCAGAACACAGATATAAAGGCTCCAAATCATGGAAACATTTTTAATGGGCTTCAGGAATTTGTTTATATGAAATCATGAAAACCAAGGCATTTACACATACTACAATTTACACTATTGCAGTTTTATTGTTTCTGTAAATAGTAGGCGAGGAAATGCTCTCTAAAAGGCTTCTCTAAAAGAtttaaacttattattattttaatttcaacTTTTAAATCCCCAGGTGTAATAAATATGCATTAATACACATCAAACCTAGTGACAATCAGCAGCCATTTAAAGAGCCTTTAAGCATTTGCCCATGACTCTGATCCTTAAAATATCTGTTCACAAAAGagcaaattaaaaaagttaattcaTTCTGCAACACATTGCAAAAACATTTGGGCAAAAAAAATACCTTATCCACAAAATGCTTTAAGGAGCAAATATCTCCAGTTTCTCAAGAAATGCTTTTGAAAAGTATAATTTGTCATGAGTTTGTGTCagtacacttttttaaataagacaatgcaaaaccacatgctgcacacattagaAAGGCATGTCAGAAGACAGCAAAAAAACCTCAAAACACTTTGACGCTTTGTATCGTCTGTGCCAAAACAACTTAGCAAAGTGATGTGACAAGGAATAGCAATATTGCAAAGTgccaacattttaataaaaatgtgttacaggcccaaaatgcaaaaatggatgtatattaCATGGATTGAATATTCATACTGTCTACATTGAaataaagggttttttttttttgcatttgcacACTGTACTCcatacatttctatttttttctgattgggGATGTAATAAACTCATACTTTTATGACATTATTACTTAAAACCTAgatgttatataatattatacttGCAAACTTCATTGCAAACaagatacatattatatatgataAGCAGAAAGTTTTTGCTGATTGCTAAAGAAACCACACCCATACTCGATCAAATGACCAAGAGAGTGAACAAACAAGAAGCATAAACCTGGCCACAAACTCCTCCACCCTTGGGAGTTACCCAGAACTGTGTGTTTTACGGAAGTTGTTAAATAATTTAGAAGATCAAAGTTTACGTTTTCTTGGCACTGTACTTGCACTGATATATCACCATTATAACCACCATTTCAAATGCATGATTATTGCtgtagaatttctattggtttattGGAGCTTAGAATTTGCTAATAAAGGTGTttagggcaaaacaaaagagatCACCAAcccttatttttctttaaaattctcGAAGATTTATTTAGTTGGGTTTTGAATTGTGAGcgaattttgtcatttttcattaaaaaattatcatttaCATGCTATACTTGACCTATACAAGGCTAGTCAAGCTTAGAAAGCATGATACAATTACAAGGTGAATTTTAGAACCCATTAATGCATTACAATTGCCATATTTCTTTGGTGCATTACAGATTAGAGGTTCCTCTAACAAATTGTATTAAAAGCCGGCCTACACTAGGCTTCTACTTATGCTCTGTTCCATTTAACTTAATTG

Function

NR:

description
PREDICTED: cytosolic sulfotransferase 3-like

GO:

id name namespace
GO:0008210 estrogen metabolic process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004304 estrone sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247961.3 True 2759 mRNA 0.38 8 43017361 43029077

Neighbor

gene id symbol gene type direction distance location
LOC103044132 LOC108432121 coding downstream 9127 42996976 ~ 43008234 (-)
LOC103044416 sult1st3,LOC108432121,LOC108265623,LOC108432095,LOC108432118 coding downstream 24985 42979466 ~ 42992376 (-)
LOC107197600 LOC108432124,LOC108265469 coding downstream 41583 42961276 ~ 42975778 (-)
LOC103044736 LOC108432124,LOC108265469 coding downstream 57706 42953528 ~ 42959655 (-)
qars qars,LOC107727984 coding downstream 154521 42848819 ~ 42862840 (-)
LOC103028227 LOC108432121,LOC108432118,LOC108432095,LOC108265470,LOC108265625 coding upstream 1254 43030331 ~ 43039986 (-)
map3k12 map3k12,LOC107711606,LOC107715569,LOC107663586 coding upstream 34210 43063287 ~ 43087871 (-)
LOC103021400 NA coding upstream 123883 43152960 ~ 43161328 (-)
LOC111192716 NA coding upstream 132158 43161235 ~ 43162382 (-)
ralgps1 ralgps1,LOC108412534,LOC107669254,LOC107727327 coding upstream 158183 43187260 ~ 43340380 (-)
LOC111192735 NA non-coding downstream 63977 42952416 ~ 42953384 (-)
G58411 NA non-coding downstream 82164 42922459 ~ 42935197 (-)
G58400 NA non-coding downstream 100969 42843930 ~ 42916392 (-)
G58404 NA non-coding downstream 143601 42872653 ~ 42873760 (-)
G58394 NA non-coding downstream 404500 42612095 ~ 42612861 (-)
G58430 NA non-coding upstream 63481 43092558 ~ 43092913 (-)
G58470 NA non-coding upstream 107167 43136244 ~ 43139283 (-)
G58476 NA non-coding upstream 139479 43168556 ~ 43169692 (-)
G58475 NA non-coding upstream 141057 43170134 ~ 43171136 (-)
G58490 NA non-coding upstream 249715 43278792 ~ 43335618 (-)
G58022 LOC103032860,LOC108432146 other downstream 1618883 41396086 ~ 41398478 (-)
tprg1l tprg1l,LOC107710788,LOC107678419,LOC107698845,LOC106513028 other downstream 2261347 40748741 ~ 40756014 (-)
LOC103037008 LOC108442081,LOC105022382,LOC106567250 other downstream 2838220 40165400 ~ 40179141 (-)
G57727 kdm5c,LOC107550909,LOC107747206,LOC107570512 other downstream 2898266 40117789 ~ 40119095 (-)
LOC103030299 fkbp1aa,fkb1b,fkbp1a,LOC103030299,LOC107553142,LOC107574256,LOC107752559,LOC107707744 other downstream 3454440 39521544 ~ 39562921 (-)
G58435 aaas other upstream 73793 43102870 ~ 43107623 (-)
G58537 NA other upstream 653247 43682324 ~ 43682684 (-)
G58649 NA other upstream 1338823 44367900 ~ 44368368 (-)
G58678 NA other upstream 1445082 44474159 ~ 44477666 (-)
snrnp200 snrnp200,LOC107686403,LOC107602857,LOC107667532,LOC107600001,LOC108265067 other upstream 1557229 44586306 ~ 44622074 (-)

Expression


Co-expression Network