LOC103044132 (LOC108432121)


Basic Information

Item Value
gene id LOC103044132
gene name LOC108432121
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 42996976 ~ 43008234 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247963.3
CTAGTATAACATGCAGTTGTTTAGATTTATGGCTTCCTTTCCACTCTCTCTATTTGTTGATTTAACTCTCTTGCGCAATGCCTCTCTGTTTTTCAAATTTCTCTCTCCATTAGAAAACCACAAAACATAATTCAAACCATTTCTGTGGAATGTGCCACAGCATCCCCCAGCAAGGAATATGTATCTATAACAGCTGTACTAATGACATGTCTGACAGTCACAGATACGTAAATCACACTTGTGAGTTAGGTTCATTtatgaacattttttatttaaaagtgggCAATTTACAGTTTATTCAGAACACTTCATATAATGCACAGATTAGCACTGGAaatctgtgtttatatacagtatgaacGGGTGGAACTCAGCTGTGAAGAGGCGGTACATGATATAAAGTGGGCAAAGATCAACTGAGATAAAGTACAAGTAGTGGCAGAGAACAGAGTTTCAGACAAGCAGGCGAAGGACaaccaaacaaaagaaaaagataagagTGAGGAATGCAATAAGAAGTGGGTCAAATATAAACTCTTGTGTACTTCATGATGGAAGGACCTGATTTATCTTCGACTATCAGTCGTGCAGAGCTGATTGAGTTTGAAGGCATCTCTATGGTCCATTTCTTCACTGAAAACTGGGAGAAAATTCAGAACTTCCAAGCAAGACCAGATGACATTCTCATTGCCACCTATCCCAAAGCAGGAACTACTTGGGTGTCCTATATTTTGGATCTCCTCTACTTTGGCAACACAGCGCCAGAGCGTCAGACCTCCCAACCCATCTACATGCGGGTTCCTTTCCTCGAGGCAACCTTCCCAGGAATACCTTCAGGGGTGGATCTAGCAGACAACATGTCGACTAAACCACGCCTTATCAAAACCCACCTTCCTGTGCAACTGGTGCCCAAGTCCTTCTGGGAACAGAACTGCAGGGTTGTCTATGTAGCTCGTAATGCCAAAGACAATGCTGTGTCTTTTTATCACTTTGACCGGATGAACATGACAGCACCAGAGCCAGGAGACTGGAGCACGTATCTACAGAGGTTCAAGAATGGAAAGACTGTGTTTGGTCCTTGGTATGATCATGTGTGTGGATTCTGGGAGAAGAAGCAGAcctactcaaatattcactacaTGTTCTTTGAGGACATGGTGGAGGATACGGGGCGCGAGTTGGAGCGTTTGTGTTCCTTCCTCGGTTTGTTTACACCTATAGAAGAAAGAGAGCAGATTAGAAAAGGAGTTCACTTTGATTCCATGAAGCACAACAGCATGACCAACTACTCTACTATCCCACTCATGGACTTCAAGGTCTCACCGTTCATGCGCAAAGGTAAAGTCGGGGACTGGAAGAACCACTTCACTGTGACTCAGAACGAGCAGTTTGATGAACACTACAAACAGAAGATGAAGAACAGCACCCTCCACTTCAGAACAGAGATTTAAACACCATGACCATGACTCCATATCTTCCATTACATGCTGATCAGGGACTTTTTATTGCATTATGTCTTGGTCGTTCTTGCTTGGCAGCTTTTTTCTCACGCACCTGCAAGCAGAAACACGCAAGCCTTCATTTTAAGAATACCATAGTAGCGGGAGAAGCTGATCAGTATCTGATGGACACAAATTCTCACACAGTTAAGGAACCAAATCAGACTGCCTTTTACTGCCATTCAGtgcaacaaattaaaaaaagtagaaaatagaaaaagtagaaatattttgtctttattaTGGACGCAAACATAAATTCACAAACCCTCTATAGGAAACAATATTATAATGCTTAATTTCTGAAAATGGGCTTCatttattataacaaaaaaaaaaaaataataataaattaacataaaattgGTATGCTCAAAGTAACagcactttttattgtttttgtttagtgaagaatcataacatttttagaaatatttttgtGTTCTAAATATCCCTGtagaacagtttttttattctttcaaaACTTtttcaattaacaaaaaaatgtcatttggACAGTGCTATCCAGTGTTTTTGATTAGTTGTTTAGCTTTTTTGACTGTTAAATAAAACCTGTAATGAATTGTA

Function

NR:

description
PREDICTED: cytosolic sulfotransferase 3-like

GO:

id name namespace
GO:0008210 estrogen metabolic process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004304 estrone sulfotransferase activity molecular_function

KEGG:

id description
K01014 SULT1A; aryl sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247963.3 True 2087 mRNA 0.39 8 42996976 43008234

Neighbor

gene id symbol gene type direction distance location
LOC103044416 sult1st3,LOC108432121,LOC108265623,LOC108432095,LOC108432118 coding downstream 4600 42979466 ~ 42992376 (-)
LOC107197600 LOC108432124,LOC108265469 coding downstream 21198 42961276 ~ 42975778 (-)
LOC103044736 LOC108432124,LOC108265469 coding downstream 37321 42953528 ~ 42959655 (-)
qars qars,LOC107727984 coding downstream 134136 42848819 ~ 42862840 (-)
mtor mtor,LOC107564227,LOC107727986,LOC107594963 coding downstream 153315 42652007 ~ 42843661 (-)
LOC103043615 LOC108432095,LOC108432121 coding upstream 9127 43017361 ~ 43029077 (-)
LOC103028227 LOC108432121,LOC108432118,LOC108432095,LOC108265470,LOC108265625 coding upstream 22097 43030331 ~ 43039986 (-)
map3k12 map3k12,LOC107711606,LOC107715569,LOC107663586 coding upstream 55053 43063287 ~ 43087871 (-)
LOC103021400 NA coding upstream 144726 43152960 ~ 43161328 (-)
LOC111192716 NA coding upstream 153001 43161235 ~ 43162382 (-)
LOC111192735 NA non-coding downstream 43592 42952416 ~ 42953384 (-)
G58411 NA non-coding downstream 61779 42922459 ~ 42935197 (-)
G58400 NA non-coding downstream 80584 42843930 ~ 42916392 (-)
G58404 NA non-coding downstream 123216 42872653 ~ 42873760 (-)
G58394 NA non-coding downstream 384115 42612095 ~ 42612861 (-)
G58430 NA non-coding upstream 84324 43092558 ~ 43092913 (-)
G58470 NA non-coding upstream 128010 43136244 ~ 43139283 (-)
G58476 NA non-coding upstream 160322 43168556 ~ 43169692 (-)
G58475 NA non-coding upstream 161900 43170134 ~ 43171136 (-)
G58490 NA non-coding upstream 270558 43278792 ~ 43335618 (-)
G58022 LOC103032860,LOC108432146 other downstream 1598498 41396086 ~ 41398478 (-)
tprg1l tprg1l,LOC107710788,LOC107678419,LOC107698845,LOC106513028 other downstream 2240962 40748741 ~ 40756014 (-)
LOC103037008 LOC108442081,LOC105022382,LOC106567250 other downstream 2817835 40165400 ~ 40179141 (-)
G57727 kdm5c,LOC107550909,LOC107747206,LOC107570512 other downstream 2877881 40117789 ~ 40119095 (-)
LOC103030299 fkbp1aa,fkb1b,fkbp1a,LOC103030299,LOC107553142,LOC107574256,LOC107752559,LOC107707744 other downstream 3434055 39521544 ~ 39562921 (-)
G58435 aaas other upstream 94636 43102870 ~ 43107623 (-)
G58537 NA other upstream 674090 43682324 ~ 43682684 (-)
G58649 NA other upstream 1359666 44367900 ~ 44368368 (-)
G58678 NA other upstream 1465925 44474159 ~ 44477666 (-)
snrnp200 snrnp200,LOC107686403,LOC107602857,LOC107667532,LOC107600001,LOC108265067 other upstream 1578072 44586306 ~ 44622074 (-)

Expression


Co-expression Network