LOC103044416 (sult1st3,LOC108432121,LOC108265623,LOC108432095,LOC108432118)


Basic Information

Item Value
gene id LOC103044416
gene name sult1st3,LOC108432121,LOC108265623,LOC108432095,LOC108432118
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 42979466 ~ 42992376 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247964.3
TtaaaagggagaaaaaagggGGAAACGGCTATGGTATGTGTAAGAGCAGTGTCAGAGAAAAGAGCTCTAGACACAAGTCACTGAGAGAAAAGTGAAGAAGATAAATGAGGATCGGGAAACTGTTTTCATTATGGAAGGAATAAATTTCCCTTTGAATATCAGTCGACCAGAGATGTTTGAGTTTGAAGGCATTTTTATGGACCATTACTTCACTGACACCTGGGAGAAAACTCAGAAGTTCCAGGCAAGACCAGATGACATCCTTGTAGCCACTTATCCCAAAGCAGGCACCACTTGGGTATCCTATATTTTAGACCTGCTTTACTTTGGAAACACAGCGCCAGAACGTCAGACTGATCTGCCCATCTACTTGCGAGTACCATTTCTTGAGGCATCATTTCCTGGAATGCCTTCAGGAGTCGAGCTGGCTGACACATTGCCCACCACTCCACGCATAATCAAAACTCATCTTCCTGTTCAATTGATACCCAAGTCCTTCTGGGAACAGAACTGCAGGATTGTCTACGTAGCTCGTAATGCTAAAGACAATGTTGTGTCTTATTATCATTTTGACCGGATGAACATGGGAGAGCCTGAGCCAGGAGACTGGAACACATTTTTACAGACATTCATGGAAGGAAAGAAGGTGTTTGGTCCTTGGTATGATCATGTGTGTGGATACTGGGAGAAGAAGCGGAcctactcaaatattcactacaTGTTCTTTGAggacatggtggagGACACGGGGCGTGAGGTGGAGCGTTTGTGCTCCTTCCTTGGTTTATCTACACCaatagaagaaagagagaggattaCAAAAGGCACTCATTTTGACGCCATGAAGAAGAACAATATGACCAACTACTCTACAGTGCCAATCATGGACTTCAACGTTTCACCGTTCATGCGCAAAGGTAAAGTCGGGGACTGGAAGAACCACTTCACTGTGGCTCAGAATGAGCAGTTTGATGAACACTACAAACAGAAGATGAAGAACACCACCCTCCAGTTCAGAACAGAGTTATAAGGCGTCAAAAAATGTCCATAACCTAATATGGTCCAGTTTACTGATTAGCACTGACAAACATTTTCTGTGAAgcaaattcacttttttttttttttacaagaaaatACAAGAAGTACATCTGTAGCCATTTGTTTACTGTCACCCACCAGAGACACAGCTTGGGTGCCAACATCCCAACATCAGTAAAGACATTTGCTTAGATCAtttgattattatataaataatcaaaTGATGGTGGTTATATgtatccatcttttttttttggaaatctaCATTAATATTAGTTCACCTTATGGCATGAAAGAATCGCACATAtgtaatattgatttctaataaACTATTGCTTTAATCTATGTTATGATTTAGTAAAAACAACTAATTGAATTGTggaaagcaaacaaaaaagtattCCTCAATATAAATCATCAAAGCTCAATTATCTCAATGACCAATACCTCTGTATAGTGTGTTAATATGTACACTGTTTGTTGAAATGTTAACatgtatattttttgaaaagtaaatacattaaataca

Function

symbol description
sult1st3 Enables sulfotransferase activity. Involved in xenobiotic metabolic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including breast cancer; gastrointestinal system cancer (multiple); lung cancer (multiple); reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to human SULT1A1 (sulfotransferase family 1A member 1).

NR:

description
PREDICTED: cytosolic sulfotransferase 3-like

GO:

id name namespace
GO:0008210 estrogen metabolic process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004304 estrone sulfotransferase activity molecular_function

KEGG:

id description
K01014 SULT1A; aryl sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247964.3 True 1567 mRNA 0.39 8 42979466 42992376

Neighbor

gene id symbol gene type direction distance location
LOC107197600 LOC108432124,LOC108265469 coding downstream 3688 42961276 ~ 42975778 (-)
LOC103044736 LOC108432124,LOC108265469 coding downstream 19811 42953528 ~ 42959655 (-)
qars qars,LOC107727984 coding downstream 116626 42848819 ~ 42862840 (-)
mtor mtor,LOC107564227,LOC107727986,LOC107594963 coding downstream 135805 42652007 ~ 42843661 (-)
exosc10 exosc10 coding downstream 329938 42628620 ~ 42649528 (-)
LOC103044132 LOC108432121 coding upstream 4600 42996976 ~ 43008234 (-)
LOC103043615 LOC108432095,LOC108432121 coding upstream 24985 43017361 ~ 43029077 (-)
LOC103028227 LOC108432121,LOC108432118,LOC108432095,LOC108265470,LOC108265625 coding upstream 37955 43030331 ~ 43039986 (-)
map3k12 map3k12,LOC107711606,LOC107715569,LOC107663586 coding upstream 70911 43063287 ~ 43087871 (-)
LOC103021400 NA coding upstream 160584 43152960 ~ 43161328 (-)
LOC111192735 NA non-coding downstream 26082 42952416 ~ 42953384 (-)
G58411 NA non-coding downstream 44269 42922459 ~ 42935197 (-)
G58400 NA non-coding downstream 63074 42843930 ~ 42916392 (-)
G58404 NA non-coding downstream 105706 42872653 ~ 42873760 (-)
G58394 NA non-coding downstream 366605 42612095 ~ 42612861 (-)
G58430 NA non-coding upstream 100182 43092558 ~ 43092913 (-)
G58470 NA non-coding upstream 143868 43136244 ~ 43139283 (-)
G58476 NA non-coding upstream 176180 43168556 ~ 43169692 (-)
G58475 NA non-coding upstream 177758 43170134 ~ 43171136 (-)
G58490 NA non-coding upstream 286416 43278792 ~ 43335618 (-)
G58022 LOC103032860,LOC108432146 other downstream 1580988 41396086 ~ 41398478 (-)
tprg1l tprg1l,LOC107710788,LOC107678419,LOC107698845,LOC106513028 other downstream 2223452 40748741 ~ 40756014 (-)
LOC103037008 LOC108442081,LOC105022382,LOC106567250 other downstream 2800325 40165400 ~ 40179141 (-)
G57727 kdm5c,LOC107550909,LOC107747206,LOC107570512 other downstream 2860371 40117789 ~ 40119095 (-)
LOC103030299 fkbp1aa,fkb1b,fkbp1a,LOC103030299,LOC107553142,LOC107574256,LOC107752559,LOC107707744 other downstream 3416545 39521544 ~ 39562921 (-)
G58435 aaas other upstream 110494 43102870 ~ 43107623 (-)
G58537 NA other upstream 689948 43682324 ~ 43682684 (-)
G58649 NA other upstream 1375524 44367900 ~ 44368368 (-)
G58678 NA other upstream 1481783 44474159 ~ 44477666 (-)
snrnp200 snrnp200,LOC107686403,LOC107602857,LOC107667532,LOC107600001,LOC108265067 other upstream 1593930 44586306 ~ 44622074 (-)

Expression


Co-expression Network