LOC103022051 (angptl2b,angptl2,LOC107669255,LOC107723239,LOC107727328,LOC107550587)


Basic Information

Item Value
gene id LOC103022051
gene name angptl2b,angptl2,LOC107669255,LOC107723239,LOC107727328,LOC107550587
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 43242755 ~ 43279597 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247977.2
gagagagaaagagagagagggggggtaGACTGGTATGGCAGAAGTAATGGACAGCTCAGAGTGacagaacacatacacacacacacacacacaccttgttgAGGGTTGAGAAGGCAGGCTGACCCAGCTGAGCTCTCTCACTCCTACTGAGAGCTCTGAGGAACCACCACCTCCCACCTCTGCTCCACAATTCTACTCAGTTCTACACACTTTCACCTGCTTTCCTCACTGGAACACCtggaccttttttttatttcttctatctggaagatttttttctgataactttggataattttgtgttttgcaaATTGCTCAAGGAGACAATTCTACAACAGATCCACAGGAatactattttttaattcatttttgatctaattaaaataagaatattgtttaaaataagaatactGTGGGCATCTCTCTGCCTATTTGTTTCAGCCGATCAGTTTCAGCTTCTTTCAGAGCGCCTGGATCCGTCAGCTTTTCACAGCCTCAGTGTCTCCAAACAGACAAAGGTTCTTAACTGGAAGTTCATGAGAAGTGTCTCCCTTCACTCTGAGGACACGCACCAACAAAAGAGTAACAGCAGGAGATTACTGCGGGAACCGGAGCCTGAACTGCAGCGAGGAGACGGTGCAGGGCATCACAGAGCTCTCCACAAGCTGTGATGACTTCTACAGGACTCTGAAGAGAACCCGAAGAGCTGTTTGTGGAAGGGGTGTAAAACTGTCTGCAGCTCACAGTCCATTCAGACGTGCTTTGGCATCGTGATGGAGGTCCCTGCGCTGGTAGTGGTGGTCCTTTTCTTGGTGGGTGGACTGTTCTCCTCACTGGAAGGCAGTGGTGGTGTGCAGGAGTTTGACAGCAGCGATGAAGGTCCAGAGTCCGGGTTTCTCTCTGCCTCGCGGACACGTCGGTCCCCTGAAGCCCCTTCTCAAGACAAGTGCTCCTACACCTTCATCGTCCCCCATCAGAAAGTCACAGGGGCCATTTGCGTCAACTCAAAGGAGCCTGAAGCTGTGCTGGAGAATCGAGTCAACAAGCAAGAGCTGGAGCTTCTCAACTCTGAGCTCCATAAGCAGAAGAGGCAGATCGAGACTCTGCAGCAGCTGGTGGAAGTCGACGGCGGCATCGTCAACGAAGTCAAACTCCTGCGCAAAGAGTCGCGCAACATGAACTCTCGCGTGACTCAGCTCTACATGCAGCTTCTGCACGAGATCATCCGCAAACGAGACAACGCGCTGGAGCTGTCCCAGCTGGAGAACAAGATTCTCAACCAGACCTCCGAGATGCTGCAGCTCACCAACCGCTACAAAGATCTAGAGCACAAGTACCAGTACTTGGCCACACTGGCCAACAACCAGTCTGCCCTCATCGCCCTCCTGGAGACGCAGTGTCAGCAGAGGGGAACCACGGTGGTTGCACATAGACCACCCCCTCAGCCCCAACCCCATCCGCAACCCCAGCCCAGACCCTCTCCACCCATCAGCAAGCCATATCAGCCGCCCACCTACAACCGCAACAACCAGATAACCAACGAGATTCAGAGCGACCAAAACCTTAAAGTGCCACCGCCTCCACTACCCACAATGCCGAGTGGCAGTGACAGTAACTACACCACAATGAAGCCCTCAGGTCCATGGAAGGACTGTCTGGAGGCGCTGGATGGTGGGCACACCAATAGCGGCATGTTCCTGGTGAAACCTGAGAACACCAATAAGCTGATGCAGGTGTGGTGCGACCAGAGACAAGATCCTGGGGGCTGGACAGTCATTCAAAGACGTATGGACGGCTCTGTCAACTTCTTCAGGAACTGGGAGACGTATAAGCAAGGCTTTGGGAATATAGACGGAGAGTACTGGCTGGGGCTGGAGAACATTTACTGGTTGACCAACCAGGGAAACTACAAGCTGCTGGTGACGCTGGAGGACTGGTCCGGCCGCAAGACGTTTGCGGAGTACGCCAGTTTCAGACTGGAACCAGAGACGGACTTCTACAAGCTCAGGGTGGGGCGTTACCATGGTAATGCTGGAGATTCGCTCACCTGGCACAACGGCAAGCAGTTCACCACACTGGACCGAGATCACGACGTGTACACAGGTAACTGTGCCCACTACCAGAAAGGAGGCTGGTGGTATAATGCCTGCGCCCACTCGAACCTGAACGGCGTGTGGTACCGGGGAGGACACTACCGCAGCCGCTACCAGGATGGAGTTTACTGGGCGGAGTTTAAAGGAGGAGCCTATTCCCTAAAGAAAGTAGTTATGATGATCCGTCCCAACCCCAACACATTTCATTAAGTGTGATATAAATGATGGGGAACTCAGAGATATCCTCTTTTGTGCAATTCTGATTTACGTCATTAATACGTAGTGAGCCCAGCTGGAGGGGTTAGGAAGATAGAGATATCTGAATAAAAGACACAATGACTACAATGgaattttatttgtataaaactACAAATCTACAAAACTCTTTCTCTAGCCTTTTAAACTGTGCTCTTGATATGGGCTAGATTATTCTACTTTCACTTTGAGTGGTCATAATAAACATGTAactgtagtaaaataaatgtagtgCCTTCACCAAAATATACCAAGGGACACCATTAGACACAGGACACTCAATCCAGTGGTAAGACATTATGAATAGATTATGgtcttttagtttgtttaaagcaaaaaagggttcattatttatttcaggGATTGCAATTTATTGTGTAGTTTCTTGAAATGTTGAGTTTTAGTCGTGCAAAAATATGCTGCAATATTAGACAGATAATATCAGAGCATTTTCTATACAGTATGACATCTAAAATGTAAATTCTGCATTCACAGAAGcctatatacaggggttggacaatgaaactgaaacacctggttttagaccacaataatttattgtggtgacggacagttc
>XM_015605509.2
gagagagaaagagagagagggggggtaGACTGGTATGGCAGAAGTAATGGACAGCTCAGAGTGacagaacacatacacacacacacacacacaccttgttgAGGGTTGAGAAGGCAGGCTGACCCAGCTGAGCTCTCTCACTCCTACTGAGAGCTCTGAGGAACCACCACCTCCCACCTCTGCTCCACAATTCTACTCAGTTCTACACACTTTCACCTGCTTTCCTCACTGGAACACCtggaccttttttttatttcttctatctggaagatttttttctgataactttggataattttgtgttttgcaaATTGCTCAAGGAGACAATTCTACAACAGATCCACAGGAatactattttttaattcatttttgatctaattaaaataagaatattgtttaaaataagaatactGTGGGCATCTCTCTGCCTATTTGTTTCAGCCGATCAGTTTCAGCTTCTTTCAGAGCGCCTGGATCCGTCAGCTTTTCACAGCCTCAGTGTCTCCAAACAGACAAAGGTTCTTAACTGGAAGTTCATGAGAAGTGTCTCCCTTCACTCTGAGGACACGCACCAACAAAAGAGTAACAGCAGGAGATTACTGCGGGAACCGGAGCCTGAACTGCAGCGAGGAGACGGTGCAGGGCATCACAGAGCTCTCCACAAGCTGTGATGACTTCTACAGGACTCTGAAGAGAACCCGAAGAGCTGTTTGTGGAAGGGGTGTAAAACTGTCTGCTCACAGTCCATTCAGACGTGCTTTGGCATCGTGATGGAGGTCCCTGCGCTGGTAGTGGTGGTCCTTTTCTTGGTGGGTGGACTGTTCTCCTCACTGGAAGGCAGTGGTGGTGTGCAGGAGTTTGACAGCAGCGATGAAGGTCCAGAGTCCGGGTTTCTCTCTGCCTCGCGGACACGTCGGTCCCCTGAAGCCCCTTCTCAAGACAAGTGCTCCTACACCTTCATCGTCCCCCATCAGAAAGTCACAGGGGCCATTTGCGTCAACTCAAAGGAGCCTGAAGCTGTGCTGGAGAATCGAGTCAACAAGCAAGAGCTGGAGCTTCTCAACTCTGAGCTCCATAAGCAGAAGAGGCAGATCGAGACTCTGCAGCAGCTGGTGGAAGTCGACGGCGGCATCGTCAACGAAGTCAAACTCCTGCGCAAAGAGTCGCGCAACATGAACTCTCGCGTGACTCAGCTCTACATGCAGCTTCTGCACGAGATCATCCGCAAACGAGACAACGCGCTGGAGCTGTCCCAGCTGGAGAACAAGATTCTCAACCAGACCTCCGAGATGCTGCAGCTCACCAACCGCTACAAAGATCTAGAGCACAAGTACCAGTACTTGGCCACACTGGCCAACAACCAGTCTGCCCTCATCGCCCTCCTGGAGACGCAGTGTCAGCAGAGGGGAACCACGGTGGTTGCACATAGACCACCCCCTCAGCCCCAACCCCATCCGCAACCCCAGCCCAGACCCTCTCCACCCATCAGCAAGCCATATCAGCCGCCCACCTACAACCGCAACAACCAGATAACCAACGAGATTCAGAGCGACCAAAACCTTAAAGTGCCACCGCCTCCACTACCCACAATGCCGAGTGGCAGTGACAGTAACTACACCACAATGAAGCCCTCAGGTCCATGGAAGGACTGTCTGGAGGCGCTGGATGGTGGGCACACCAATAGCGGCATGTTCCTGGTGAAACCTGAGAACACCAATAAGCTGATGCAGGTGTGGTGCGACCAGAGACAAGATCCTGGGGGCTGGACAGTCATTCAAAGACGTATGGACGGCTCTGTCAACTTCTTCAGGAACTGGGAGACGTATAAGCAAGGCTTTGGGAATATAGACGGAGAGTACTGGCTGGGGCTGGAGAACATTTACTGGTTGACCAACCAGGGAAACTACAAGCTGCTGGTGACGCTGGAGGACTGGTCCGGCCGCAAGACGTTTGCGGAGTACGCCAGTTTCAGACTGGAACCAGAGACGGACTTCTACAAGCTCAGGGTGGGGCGTTACCATGGTAATGCTGGAGATTCGCTCACCTGGCACAACGGCAAGCAGTTCACCACACTGGACCGAGATCACGACGTGTACACAGGTAACTGTGCCCACTACCAGAAAGGAGGCTGGTGGTATAATGCCTGCGCCCACTCGAACCTGAACGGCGTGTGGTACCGGGGAGGACACTACCGCAGCCGCTACCAGGATGGAGTTTACTGGGCGGAGTTTAAAGGAGGAGCCTATTCCCTAAAGAAAGTAGTTATGATGATCCGTCCCAACCCCAACACATTTCATTAAGTGTGATATAAATGATGGGGAACTCAGAGATATCCTCTTTTGTGCAATTCTGATTTACGTCATTAATACGTAGTGAGCCCAGCTGGAGGGGTTAGGAAGATAGAGATATCTGAATAAAAGACACAATGACTACAATGgaattttatttgtataaaactACAAATCTACAAAACTCTTTCTCTAGCCTTTTAAACTGTGCTCTTGATATGGGCTAGATTATTCTACTTTCACTTTGAGTGGTCATAATAAACATGTAactgtagtaaaataaatgtagtgCCTTCACCAAAATATACCAAGGGACACCATTAGACACAGGACACTCAATCCAGTGGTAAGACATTATGAATAGATTATGgtcttttagtttgtttaaagcaaaaaagggttcattatttatttcaggGATTGCAATTTATTGTGTAGTTTCTTGAAATGTTGAGTTTTAGTCGTGCAAAAATATGCTGCAATATTAGACAGATAATATCAGAGCATTTTCTATACAGTATGACATCTAAAATGTAAATTCTGCATTCACAGAAGcctatatacaggggttggacaatgaaactgaaacacctggttttagaccacaataatttattgtggtgacggacagttc

Function

symbol description
angptl2b Predicted to enable signaling receptor binding activity. Acts upstream of or within angiogenesis; hemopoiesis; and positive regulation of Notch signaling pathway. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including fin; gill; liver; spleen; and yolk. Orthologous to human ANGPTL2 (angiopoietin like 2).
angptl2 Predicted to enable signaling receptor binding activity. Predicted to be involved in angiogenesis. Located in extracellular exosome. Part of collagen-containing extracellular matrix.

NR:

description
PREDICTED: angiopoietin-related protein 2-like

GO:

id name namespace
GO:0001525 angiogenesis biological_process

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247977.2 True 2925 mRNA 0.48 5 43242755 43279597
XM_015605509.2 False 2922 mRNA 0.48 5 43242755 43279597

Neighbor

gene id symbol gene type direction distance location
LOC103047068 LOC108412532,LOC103047068,LOC108265240,LOC103370865,LOC100697880,LOC104931656 coding upstream 103640 43109418 ~ 43139115 (+)
aaas aaas coding upstream 135125 43093419 ~ 43107630 (+)
pcbp2 pcbp2,LOC107663584,LOC107569168,LOC106571954,LOC105026324 coding upstream 185039 43046479 ~ 43057716 (+)
LOC103045241 NA coding upstream 295755 42915487 ~ 42947000 (+)
ogg1 ogg1 coding upstream 369700 42862953 ~ 42873055 (+)
LOC103030075 NA coding downstream 1168835 44448432 ~ 44529452 (+)
LOC103027244 NA coding downstream 1256272 44535869 ~ 44540982 (+)
LOC103027865 NA coding downstream 1275816 44555413 ~ 44567511 (+)
dtx1 dtx1,LOC107692206,LOC107671029 coding downstream 1356129 44635726 ~ 44692350 (+)
LOC111192718 NA coding downstream 1558832 44838429 ~ 44839196 (+)
G58444 NA non-coding upstream 69925 43170141 ~ 43172830 (+)
G58267 exosc10,LOC107724196,LOC107696929 non-coding upstream 593222 42628621 ~ 42649533 (+)
G58265 NA non-coding upstream 629196 42611649 ~ 42613559 (+)
LOC111192688 NA non-coding upstream 819942 42366132 ~ 42422813 (+)
G58227 NA non-coding upstream 836163 42406197 ~ 42406592 (+)
G58454 NA non-coding downstream 41159 43320756 ~ 43326039 (+)
G58460 NA non-coding downstream 66788 43346385 ~ 43349871 (+)
G58542 NA non-coding downstream 429119 43708716 ~ 43708986 (+)
G58564 NA non-coding downstream 732533 44012130 ~ 44012825 (+)
G58577 NA non-coding downstream 813327 44092924 ~ 44093145 (+)
G58256 ppih other upstream 616641 42577192 ~ 42626114 (+)
LOC103040535 arhgef16,ybx1,LOC107595774 other upstream 666052 42534901 ~ 42576703 (+)
G58211 acot7 other upstream 960785 42208721 ~ 42281970 (+)
ndufa7 ndufa7 other upstream 1188866 42035839 ~ 42053889 (+)
G58025 NA other upstream 1803844 41438027 ~ 41438911 (+)
G58529 NA other downstream 381185 43660782 ~ 43661647 (+)
LOC111192736 NA other downstream 1156261 44435858 ~ 44446503 (+)
LOC103028384 ptges2,LOC107083974,LOC107081068 other downstream 1299483 44579080 ~ 44583918 (+)
G58696 snrnp200,LOC106579886,LOC106585548 other downstream 1315636 44595233 ~ 44600960 (+)
LOC103029434 dgcr6,LOC103029434,LOC108430318,LOC107572069,LOC107721026,LOC108265986,LOC105899531 other downstream 1573183 44852780 ~ 44866838 (+)

Expression


Co-expression Network