nudt12 (nudt12)


Basic Information

Item Value
gene id nudt12
gene name nudt12
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25522975 ~ 25531959 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670396.1
TATGTTTACGACGCCAGACCTGGGCTGTGTTCAGATTCTCATATAGAGTCTCCTGAACTACCTGCTGCCTTGGCTTTGCCTGGTTTGCAGCTTATGGCCTTCTTTAGCAGAAAAACTATTGGGACGCGGCCGTCTTATTTGAACGCGTTGTAGCCTTTCTGCACTTCTACCCTACTTCTGCCCTACTTAGTCACGTGTGACACAGGTGGGTCCTCCTGAAATCAGACTACCAGCCCGTGGAATCAGcTCAGATCATGACGAGTGTACAGATGAGTGCTCTGGATGAGATGGTCCAGCAGTTCCTGGAACATGCATCCAGTGGTGATTTAGTCAAAGTGTCTTTTTTGATTTCTCACTCCAGACATCTGCTTAATGAAAGTGGAAAACAAGGCTGGACAGCTTTAATGTTAGCTGCAAGAAATGGACACTATGATGTGGTGAAAGCTTTACTATCAGAGGgGTGTAATACAGCATTAACAAACAGATCTGGCCAGACTGCGCATGACATCGCAAAATTCTGGGGACACAAACACATTGCCAATTTGCTGGCCAATGGTGGGGACGGTAACCTTCAAGTAATCCTACCAAACACTGGAGCTACAGGACATGAGAGTTACTTCAGTAGAGAGTATCTCGACAGACTGAGTGATAAAAGGTCAGATTCAGAATGGCTTTCAGCCAAACTGGCATCTCCAAAGAccgtttttcttcttttttataatttggaCCCTCTCGTTATGTCTGGGCCAGAAGAATTGAATAACAGTCATCCTAAGATGAAACTGTGTAGGCTTGGAAGAATCTCTGTGGATGAATTAATGAAGAAAAGCGACACTGTGGTTATTTTTCTGGGAGTGGAGAAGGAGGACCATACACTGCAGTCAAAAGAGGAGGATGGACTTACTGCATGGTTCGCTCTGAATACCCAGGAGAATCCCATAGACAGTCTAGTGCCTAAAGATTCAAACAGATTCTTCCTTAAGGGGGCGATGCCAGGACTCTTCTTGTTTGATGAAGATGAAGCAGGTGTAATTGCACAAGCCAGGTCTGTTCTCGCGTGGCACAGTCGATACAGCTTTTGTCCTACATGTGGGGGCAGGACCAAAGTAGATGAAGGAGGCTACAAAAGAACATGTCTGAATGAGGGCTGCAAGAGTCTTCATGGCATCCACAATACATCTTATCCTAGAGTGGATCCTGTCGTCATCATGCTAGTCATTCACCCTGATGGGAATCAGTGCTTACTAGGCAGAAAAAAGATTTTTCCTCCAGGGATGTTTTCATGCCTTGCTGGATTTGTTGAACCAGGTGAGACCATTGAGAATGCAGTCAGACGGGAGGTTCTGGAGGAGAGCGGTGTTACTGTAGGCCCGGTTCAGTACGTTTCCTGTCAGCCTTGGCCGATGCCGTCCTCCCTAATGATTGGATGCCTTTCAGTAGCAGTGTCAACAGATATCAATGTTGATAAAAATGAAATTGAAGAGGCTCGCTGGTTCACGAGACAACAGGTACTAGATGCAATTGCAAGGAGCAACCAGGCAGTTTTCACCATGCCTCCCAGACAAGCTATTGCACATTATCTAGTGAAACACTGGATTGGAATAAACGCAAACCTTTGAGctaaaaattaaatgttcttgaTTATTTGCCAAATTCataaatatgcttaaaaaataaCTACAAATGTACAgtgattgtaattttttttttgataagcTCAAAAATCAcatctttttaacttttattcatGCTTTCAGGGTTTGTAAATGTGCAACTCCCTAAATATACTCACTTTGTGAGTaactgaaaaacatttattataaaaatataagtttATTTTGTACTGTGGGTTAATTATGCAATATCATTCACCATTTATTACCATTGTTTTTAGTTTGAGAATACTAATCACGCTGTTTAGTATGAACTATATTGCaatacattctgtaaatatttgtgatattatttaaatgaaaaattgtGAATAGAAAAGATTAGGAAAATTAGTTCTTTCTGTGAAAcagtttcacacttttattgtaaataaagtgaaaatataGAGTT
>XM_022670397.1
CTGCTGGAGGATCACGTGACCTCGTTACGCCATATGTTTACGACGCCAGACCTGGGCTGTGTTCAGATTCTCATATAGAGTCTCCTGAACTACCTGCTGCCTTGGCTTTGCCTGGTTTGCAGCTTATGGCCTTCTTTAGCAGAAAAACTATTGGGACGCGGCCGTCTTATTTGAACGCGTTGTAGCCTTTCTGCACTTCTACCCTACTTCTGCCCTACTTAGTCACGTGTGACACAGcTCAGATCATGACGAGTGTACAGATGAGTGCTCTGGATGAGATGGTCCAGCAGTTCCTGGAACATGCATCCAGTGGTGATTTAGTCAAAGTGTCTTTTTTGATTTCTCACTCCAGACATCTGCTTAATGAAAGTGGAAAACAAGGCTGGACAGCTTTAATGTTAGCTGCAAGAAATGGACACTATGATGTGGTGAAAGCTTTACTATCAGAGGgGTGTAATACAGCATTAACAAACAGATCTGGCCAGACTGCGCATGACATCGCAAAATTCTGGGGACACAAACACATTGCCAATTTGCTGGCCAATGGTGGGGACGGTAACCTTCAAGTAATCCTACCAAACACTGGAGCTACAGGACATGAGAGTTACTTCAGTAGAGAGTATCTCGACAGACTGAGTGATAAAAGGTCAGATTCAGAATGGCTTTCAGCCAAACTGGCATCTCCAAAGAccgtttttcttcttttttataatttggaCCCTCTCGTTATGTCTGGGCCAGAAGAATTGAATAACAGTCATCCTAAGATGAAACTGTGTAGGCTTGGAAGAATCTCTGTGGATGAATTAATGAAGAAAAGCGACACTGTGGTTATTTTTCTGGGAGTGGAGAAGGAGGACCATACACTGCAGTCAAAAGAGGAGGATGGACTTACTGCATGGTTCGCTCTGAATACCCAGGAGAATCCCATAGACAGTCTAGTGCCTAAAGATTCAAACAGATTCTTCCTTAAGGGGGCGATGCCAGGACTCTTCTTGTTTGATGAAGATGAAGCAGGTGTAATTGCACAAGCCAGGTCTGTTCTCGCGTGGCACAGTCGATACAGCTTTTGTCCTACATGTGGGGGCAGGACCAAAGTAGATGAAGGAGGCTACAAAAGAACATGTCTGAATGAGGGCTGCAAGAGTCTTCATGGCATCCACAATACATCTTATCCTAGAGTGGATCCTGTCGTCATCATGCTAGTCATTCACCCTGATGGGAATCAGTGCTTACTAGGCAGAAAAAAGATTTTTCCTCCAGGGATGTTTTCATGCCTTGCTGGATTTGTTGAACCAGGTGAGACCATTGAGAATGCAGTCAGACGGGAGGTTCTGGAGGAGAGCGGTGTTACTGTAGGCCCGGTTCAGTACGTTTCCTGTCAGCCTTGGCCGATGCCGTCCTCCCTAATGATTGGATGCCTTTCAGTAGCAGTGTCAACAGATATCAATGTTGATAAAAATGAAATTGAAGAGGCTCGCTGGTTCACGAGACAACAGGTACTAGATGCAATTGCAAGGAGCAACCAGGCAGTTTTCACCATGCCTCCCAGACAAGCTATTGCACATTATCTAGTGAAACACTGGATTGGAATAAACGCAAACCTTTGAGctaaaaattaaatgttcttgaTTATTTGCCAAATTCataaatatgcttaaaaaataaCTACAAATGTACAgtgattgtaattttttttttgataagcTCAAAAATCAcatctttttaacttttattcatGCTTTCAGGGTTTGTAAATGTGCAACTCCCTAAATATACTCACTTTGTGAGTaactgaaaaacatttattataaaaatataagtttATTTTGTACTGTGGGTTAATTATGCAATATCATTCACCATTTATTACCATTGTTTTTAGTTTGAGAATACTAATCACGCTGTTTAGTATGAACTATATTGCaatacattctgtaaatatttgtgatattatttaaatgaaaaattgtGAATAGAAAAGATTAGGAAAATTAGTTCTTTCTGTGAAAcagtttcacacttttattgtaaataaagtgaaaatataGAGTT
>XM_022670398.1
TATGTTTACGACGCCAGACCTGGGCTGTGTTCAGATTCTCATATAGAGTCTCCTGAACTACCTGCTGCCTTGGCTTTGCCTGGTTTGCAGCTTATGGCCTTCTTTAGCAGAAAAACTATTGGGACGCGGCCGTCTTATTTGAACGCGTTGTAGCCTTTCTGCACTTCTACCCTACTTCTGCCCTACTTAGTCACGTGTGACACAGGTGGGTCCTCCTGAAATCAGACTACCAGCCCGTGGAATCAGGTTTGAAGcTCAGATCATGACGAGTGTACAGATGAGTGCTCTGGATGAGATGGTCCAGCAGTTCCTGGAACATGCATCCAGTGGTGATTTAGTCAAAGTGTCTTTTTTGATTTCTCACTCCAGACATCTGCTTAATGAAAGTGGAAAACAAGGCTGGACAGCTTTAATGTTAGCTGCAAGAAATGGACACTATGATGTGGTGAAAGCTTTACTATCAGAGGgGTGTAATACAGCATTAACAAACAGATCTGGCCAGACTGCGCATGACATCGCAAAATTCTGGGGACACAAACACATTGCCAATTTGCTGGCCAATGGTGGGGACGGTAACCTTCAAGTAATCCTACCAAACACTGGAGCTACAGGACATGAGAGTTACTTCAGTAGAGAGTATCTCGACAGACTGAGTGATAAAAGGTCAGATTCAGAATGGCTTTCAGCCAAACTGGCATCTCCAAAGAccgtttttcttcttttttataatttggaCCCTCTCGTTATGTCTGGGCCAGAAGAATTGAATAACAGTCATCCTAAGATGAAACTGTGTAGGCTTGGAAGAATCTCTGTGGATGAATTAATGAAGAAAAGCGACACTGTGGTTATTTTTCTGGGAGTGGAGAAGGAGGACCATACACTGCAGTCAAAAGAGGAGGATGGACTTACTGCATGGTTCGCTCTGAATACCCAGGAGAATCCCATAGACAGTCTAGTGCCTAAAGATTCAAACAGATTCTTCCTTAAGGGGGCGATGCCAGGACTCTTCTTGTTTGATGAAGATGAAGCAGGTGTAATTGCACAAGCCAGGTCTGTTCTCGCGTGGCACAGTCGATACAGCTTTTGTCCTACATGTGGGGGCAGGACCAAAGTAGATGAAGGAGGCTACAAAAGAACATGTCTGAATGAGGGCTGCAAGAGTCTTCATGGCATCCACAATACATCTTATCCTAGAGTGGATCCTGTCGTCATCATGCTAGTCATTCACCCTGATGGGAATCAGTGCTTACTAGGCAGAAAAAAGATTTTTCCTCCAGGGATGTTTTCATGCCTTGCTGGATTTGTTGAACCAGGTGAGACCATTGAGAATGCAGTCAGACGGGAGGTTCTGGAGGAGAGCGGTGTTACTGTAGGCCCGGTTCAGTACGTTTCCTGTCAGCCTTGGCCGATGCCGTCCTCCCTAATGATTGGATGCCTTTCAGTAGCAGTGTCAACAGATATCAATGTTGATAAAAATGAAATTGAAGAGGCTCGCTGGTTCACGAGACAACAGGTACTAGATGCAATTGCAAGGAGCAACCAGGCAGTTTTCACCATGCCTCCCAGACAAGCTATTGCACATTATCTAGTGAAACACTGGATTGGAATAAACGCAAACCTTTGAGctaaaaattaaatgttcttgaTTATTTGCCAAATTCataaatatgcttaaaaaataaCTACAAATGTACAgtgattgtaattttttttttgataagcTCAAAAATCAcatctttttaacttttattcatGCTTTCAGGGTTTGTAAATGTGCAACTCCCTAAATATACTCACTTTGTGAGTaactgaaaaacatttattataaaaatataagtttATTTTGTACTGTGGGTTAATTATGCAATATCATTCACCATTTATTACCATTGTTTTTAGTTTGAGAATACTAATCACGCTGTTTAGTATGAACTATATTGCaatacattctgtaaatatttgtgatattatttaaatgaaaaattgtGAATAGAAAAGATTAGGAAAATTAGTTCTTTCTGTGAAAcagtttcacacttttattgtaaataaagtgaaaatataGAGTT

Function

symbol description
nudt12 Predicted to enable NADH pyrophosphatase activity. Predicted to be involved in NAD catabolic process; NADH metabolic process; and NADP catabolic process. Predicted to be active in cytosol and peroxisome. Orthologous to human NUDT12 (nudix hydrolase 12).

NR:

description
peroxisomal NADH pyrophosphatase NUDT12 isoform X2

GO: NA

KEGG:

id description
K03426 E3.6.1.22, NUDT12, nudC; NAD+ diphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670396.1 False 2064 mRNA 0.41 7 25523007 25531959
XM_022670397.1 False 2055 mRNA 0.41 7 25522975 25531959
XM_022670398.1 True 2072 mRNA 0.41 7 25523007 25531959

Neighbor

gene id symbol gene type direction distance location
prdm6 prdm6 coding upstream 81765 25398983 ~ 25441210 (+)
snx2 snx2 coding upstream 176876 25323117 ~ 25346099 (+)
sncaip sncaip,LOC103399731 coding upstream 218860 25297056 ~ 25304115 (+)
znf438 NA coding upstream 807742 24641088 ~ 24715233 (+)
arhgap12 arhgap12 coding upstream 1059810 24364844 ~ 24463165 (+)
LOC103035659 LOC103035659,LOC108430319,LOC108265778,LOC106587031,LOC105014051 coding downstream 70442 25602401 ~ 25612117 (+)
LOC103036292 LOC103036292 coding downstream 93287 25625246 ~ 25633257 (+)
LOC103021869 NA coding downstream 105500 25637459 ~ 25640853 (+)
LOC103035969 LOC103035969,LOC108430321,LOC108265984 coding downstream 110347 25642306 ~ 25651303 (+)
aaed1 aaed1 coding downstream 998349 26530308 ~ 26534076 (+)
G54376 cep120,zgc:163014,LOC107712640 non-coding upstream 50979 25468054 ~ 25471996 (+)
LOC111192642 NA non-coding upstream 144734 25358002 ~ 25378241 (+)
G54310 NA non-coding upstream 296877 25225117 ~ 25226098 (+)
G54306 NA non-coding upstream 385981 25136435 ~ 25136994 (+)
G54303 NA non-coding upstream 424451 25098267 ~ 25098524 (+)
LOC111192644 NA non-coding downstream 20583 25552542 ~ 25561370 (+)
trnaw-cca_1 NA non-coding downstream 32702 25564661 ~ 25564732 (+)
trnaw-cca_2 NA non-coding downstream 33283 25565242 ~ 25565313 (+)
trnaw-cca_3 NA non-coding downstream 34936 25566895 ~ 25566966 (+)
trnaw-cca_4 NA non-coding downstream 37187 25569146 ~ 25569217 (+)
map3k8 map3k8,LOC107686375,LOC107584407,LOC107738976,LOC107665890 other upstream 414104 25092562 ~ 25108871 (+)
epc1 epc1,LOC108430856 other upstream 1232210 24254187 ~ 24290765 (+)
G53804 ddit4 other upstream 3601381 21919225 ~ 21921594 (+)
LOC103028037 LOC108429162,LOC107684133,LOC108273534,LOC108430697,LOC108274369 other upstream 3775895 21673574 ~ 21747080 (+)
fbxo11 fbxo11,fbxo11b,LOC108430631,LOC105896971,LOC107728720,LOC107582786,LOC107550041 other upstream 4697301 20794025 ~ 20825674 (+)
srp19 srp19 other downstream 14033 25545992 ~ 25549494 (+)
LOC103040153 cdc14b,LOC108265480 other downstream 1005093 26537052 ~ 26551570 (+)
LOC103023473 tmem230,ct030,LOC103023473,LOC106579885,LOC107713020,LOC101077900,LOC105894893,LOC107553029 other downstream 1430933 26962892 ~ 26973026 (+)
G54682 es1,LOC108430344,LOC105894898,LOC107553036,LOC107671040,LOC107713034 other downstream 1488285 27020244 ~ 27022891 (+)
G54690 tmem127,LOC107552193,LOC106579884 other downstream 1500876 27032835 ~ 27034938 (+)

Expression


Co-expression Network