znf131 (znf131,LOC107600021)


Basic Information

Item Value
gene id znf131
gene name znf131,LOC107600021
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 28272499 ~ 28283827 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670448.1
CAGGGGATTGTGGGAGCTGTAGTCCGGAGCGGCCGCCCTTTTCGGGGAGCGACGAGGCAGAGCGCGGCGAGAGTGCACCGATCAGGAGAGCAGAAAATATCTGCGCACAGGTTCAGATCCTACACCAGcagGAAAAGGACTGAACCATGTCTGAAGTTGGTGACATTAGAGACCATGGGCACGAGTTTCCAGCCCACTATAAAGTCATGCTGGATAAGCTGAATGAGCAGAGACAGCTGGACCAGTTCACTGACATCACGCTAATCGTGGATGGTCATCAGTTCAGAGCCCATAAAGCGGTGCTGGCTGCCTGTAGCCAATTTTTCCACAAATTCTTCCAGGACTTCACTCAGGAACCCCTTGTGGAGATCGAGGGAGTGGGCAATACTGCTTTCCGCCACCTGATGGAGTTCACCTACACAGCCACGCTGGCAGTAAATGGGGAGGAGGAGGTGAACGATGTGTGGAGAGCAGCCGAGTATCTGCAGATGCAGGAGGCCATTAAAGCCTTAAATAACAGAATGAATGGCATCACCGTACTGGGCAGTTCTTCAGTCCTGGTCGAGCGGAGTAAACCGAAGAAAAGGAAAATTGCAGAAACGTCCAACGTCATCACAGAGACGCTTCCCTTGGCGGAGACGGAGACAGTGGAGATCGAGGTGGAGGTTGGAGATGAGGCTATTGAGGTTCAGGAGGCAGGGCTGGAGGAGGTGGTGGATGCCGGACGAGTAAATACAGACCCAACCGTTGAGTCCTCGGATGACTCTGCCCTGGCTCTGCTGGCAGATATTACCAGCAAGTACCAGCAGGGGGAGCAGACGGTGCACGTGGAAAAGGGCGATGAGGAGACAGTGGTTCTGCAGGAAGAGGCGGTGATGGCCACCAAAACCCTGGAGGGcatggaggtggtggaggtccAGATCTCCCAGCTAGACAACATGTTCCGCTGTGACAAGTGTGACCGCTGCTTTAAGCTGTTCTACCACCTGAAGCAGCACATGAAGACGCACACCGCGGGCGTGGAGAAACCCTTCATCTGTAAACACTGCGGCCGGCCGTACGCTCGGGAAGGAGCACTCAAACAGCACCTCAACACCTATCACTTCGACGCTGAGGAGCAGTCCCTCCGGCAGAAGAAAAAAGTGCACGTGTGTGCGTACTGTAACAAACAGTTTGACCACTTCGGACACTTTAAAGAGCATTTAAGGAAACACACAGGTGAAAAACCATTTGAATGTCCAGACTGTCATGAGCGCTTTGCCCGGAACAGCACACTAAAGTGCCACATGTCCGCCTGCCAGAATGGCTCAGGGGCCAAGAAAGGCAGAAAAAAGCTGTACGAGTGTCAGGTGTGTAGTGAAGTGTTTAACAGCTGGGAGCAGTTTAAGGACCACCTAGTGAttcacactggtgagaagccCAATCACTGCACCTTCTGTGATCAGTGGTTCATGGCTCCACGGGATCTGGGGGCTCACCTGAGGGACCACCATGGCTTCCAGGAGGAAGTGGTGATCGCTGACCCAGCTGCTGTTCTGACAGTGACCAGTATGGAGGAGAGTGAGGAGCACGTGGTGCTGCAGGGCGGGATGAGAGTGGAGCATGTGACTGTGGAGCCGGTGGACGTGGTGGCCGTGGAGGAGGCTGTGGTCGTGGAGGAACACCCTGCGCTCCAGACCTCAGTGGCAGAGGCAGAGGAGACGGTGCTGATAGAGGTGGAGGAGGATGGACTGAAGGAACAGACAGTGGAGGTTCATCTAGAGCAGGTGACGGAATTAGCGCAGCAAGAGGTCCGAACAGAAGAGGAGAAGATCCAGACGGGAGTTGTATGAGAAACACAGTGACGTTGAACTAGTGTGGAAAAGGACTGGCGGACAGATTATCccttatatttatttctgacacaGGACGAACTGTTTTCCCTCTCTCGTCTGACTGTGATGCTGCAACATTGTTACAATGGCTACTggtcatttttgtttttgctttgtttttcctCCAAATAATAGCAATGACAACCAtttagtttacttttttttttttaagcttttttagtcTTTCAATTCTCAGAAAGTGTAAGAGAGGACAACTGATTTCTGATCTGTTGAAATCTACAAATGGTCTGGTTTAGAGTAGCTCTTAGTAGAAAAAGGtcttatttttgtaaaatgagTTTTGTAAATATGTGCATCGATTATTTTAGTGTATGACTGTctgtaaatgtttaaagaaaCAGTTCTGCGAAAAATCACATTTACCAAGTTTCCCCTTACCCACAATGTAAtcaatcagccaagacatgtttggtcTCCAAATTTTACTGTTTTGATTTAACACAGGCAGGCTAATGTAGCTTATAGGGCTGTAATCGGTACGTATCTTGAAACAGGGGTTGCAATATATATTAAGATCACTTAAGCTGCCTTCAGGTGTTCATTAAGGTGGTCCAGATTTATAAATATCAGGTTCGcaattaaaaacagcaaaaatgccACTAGCTCGCTGAATGCTGGGGGATTGTTTCtgttttatagtatatatagtgtcCTAAAGCCATATGCACATTAGCCTAGTAGCTCCAGTTTAGAACTATATAACTGTCAACAGATGGGTTAAGACGAaaactttctgtttcttttttactgAACTGTTTCTTTAAGTTAAGATATATCTGTGgattgagtgtgagtgtgtaagtgtgagtgtgtgtgtgtgtgagagtgtgtaagaaAGAGAATGGATTGTCTTTTGCTCCAGTGCCTAATCTCCTGCAGCTGGACTTGGcccgtctctctctgtctctcagtggACATTCAGACAGCTCAGGAACCTGAATGTCCACGTCCTCATCAATTTTTCATGGTTTCAGATTGTTATTCATTTGTACAGAGCAATAAAATGCTGAATTAAATCTTTAAGAGCATGGCATGCCCTTTATAAACA

Function

symbol description
znf131 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and metal ion binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF131 (zinc finger protein 131).

NR:

description
zinc finger protein 131-like

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function

KEGG:

id description
K24806 ZBTB35, ZNF131; zinc finger and BTB domain-containing protein 35

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670448.1 True 2943 mRNA 0.48 10 28272499 28283827

Neighbor

gene id symbol gene type direction distance location
ghr LOC108412734 coding upstream 25014 28212697 ~ 28247485 (+)
fbxo4 fbxo4 coding upstream 107897 28158310 ~ 28164602 (+)
c6h5orf51 cunh5orf51,si:dkey-46a10.3,clg13h5orf51,LOC103038767,LOC107667559,LOC107686395,LOC106585203 coding upstream 114940 28153462 ~ 28157559 (+)
rgs7bp rgs7bp,LOC107565984,LOC107667524 coding upstream 248896 28015206 ~ 28023603 (+)
LOC111192652 rnf180 coding upstream 258734 27999387 ~ 28013765 (+)
nim1k nim1k,LOC108412738,LOC107602863,LOC107667564,LOC107686411,LOC107599996 coding downstream 1542 28285369 ~ 28299831 (+)
LOC103037168 LOC108412740 coding downstream 20501 28304328 ~ 28313589 (+)
gadd45g gadd45g,gadd45ga,LOC108412735,LOC107724875,LOC107686412 coding downstream 36041 28319868 ~ 28322245 (+)
LOC107197569 NA coding downstream 153940 28437767 ~ 28443647 (+)
kdm2b kdm2b,kdm2ba,LOC107712479,LOC107687979 coding downstream 171105 28454932 ~ 28475661 (+)
G55053 NA non-coding upstream 10493 28258365 ~ 28262006 (+)
G55047 NA non-coding upstream 61986 28210296 ~ 28210513 (+)
G55011 NA non-coding upstream 104987 28165171 ~ 28167512 (+)
G55004 oxct1a,oxct1,LOC108414057,LOC107711896,LOC107667551,LOC107600019,LOC107686394 non-coding upstream 144593 28126754 ~ 28127906 (+)
G54991 NA non-coding upstream 175206 28032891 ~ 28097293 (+)
G55061 NA non-coding downstream 16042 28299869 ~ 28302082 (+)
G55103 NA non-coding downstream 95082 28378909 ~ 28379388 (+)
G55114 NA non-coding downstream 169686 28453513 ~ 28508501 (+)
G55115 NA non-coding downstream 187169 28470996 ~ 28482177 (+)
G55111 NA non-coding downstream 194626 28478453 ~ 28480038 (+)
ipo11 ipo11 other upstream 334110 27814215 ~ 27938389 (+)
G54841 NA other upstream 559921 27703772 ~ 27712578 (+)
LOC107197454 NA other upstream 603837 27663782 ~ 27668662 (+)
LOC103030972 LOC108430356 other upstream 1049632 27211302 ~ 27222867 (+)
G54690 tmem127,LOC107552193,LOC106579884 other upstream 1237561 27032835 ~ 27034938 (+)
asphd2 asphd2,LOC107687974,LOC107703165 other downstream 362237 28646064 ~ 28656818 (+)
G55218 NA other downstream 470203 28754030 ~ 28754817 (+)
G55502 NA other downstream 2063189 30347016 ~ 30625046 (+)
G55532 cgnl1 other downstream 2245035 30528862 ~ 30550061 (+)
G55831 LOC107691557,LOC108411168 other downstream 3636993 31920820 ~ 31924095 (+)

Expression


Co-expression Network