star (star,LOC107691570)


Basic Information

Item Value
gene id star
gene name star,LOC107691570
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 30064340 ~ 30068306 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670479.1
GAAACAGTGTGTTTACGCTTGGCTCGTCATGTTCGCTGATGTATCCTTGAGCTACAAGGCCACAGGAGGCAGAGTGATGCTGTTGGTTTATCTGCGAGGTGACCAGCCCATGACCTTGCCCAAGCTGAGACTATAAAGAGGCTGAGGGTCGCCAGATTCATTACAAATCCTCACTTCCTTTAGTTCACACCAGTCACCAGACCTACCCACTTTAGAAAGTTGGACAATGCTGCCTGCTacttttaaactgtgtgctggcATTTCCTACAGGCACACGAGGAACATGACAGGCCTAAGGAGGAACGCTATGATGGCCATCACCCACGAGCTGAGCAAACTCTCTGGACCCGGCCCAAGCACATGGGTCAAACACATCCGCCGCAGTAACTCACTGCTCTGTAAGACCtaatttaattttctaaaacGATTTGAAGAGGAAACGCTAAGTGAATCTGAGCAGGGCTACGTTCAGCAGGGTCAGCTGGCACTACAAAAATCCATCAATATCCTCAGCGACCAGGATGGCTGGCaaacagagatagagacaTCCACAGGCGACAAAGTGCTGAGCAAGGTTCTGCCAGACATTGGGAAGGTGTTCAAGCTGGAGGTGGTTCTGGACCAGCAGCCTGATGATCTGTATGAAGAGCTGGTCGACAACATTGAAAAGATGGGGGAGTGGAACCCTAATGTCAAACAAGTAAAGATTCTGCAGAAGGTTGGTCAGGACACTATGGTCACTCATGAGATGGCTTCAGAGACTCCGGGGAATGTGGTGGGTCCGCGGGATTTTGTAAGTGTGCGCTGTGCTAAACGTAGAGGCTCCACTTGCTTCCTGGCTGGGATGGCCACCCAGCACCCCAGCATGCCCGAACAGAAAGGATTTGTGAGgGCAGAGAACGGGCCTACCTGTATTGTGCTGAAACCAAGTACAGATGACCCAAACAAGACACAGTTCACCTGGTTACTCAACTTAGACCTGAAGGGTTGGATCCCAAAGACAGTCATCAACAGAGTGCTATCTCAGACGCAGGTGGATTTCGCAAATCATCTCAGACACAGAATGGCCTCCAGTGGTGGCATGGAGACAGCAATGGCCTGCTGACCCCAAGCACAAAACAGTTAAGAGAGGGTTCCTGTCAGGGCACAGTCTCCGCCCATTTACTACTGTTACTTCCTCTTTGAATGGGCTGAAACCAGACACACAATAGTTATCTAAATTCACAGCCTTTGTGCAACTCCTCACAGCTACTAAGCTACTactagagctgcacaatatacTGTAGATTATCTGAGAATGTGATTACAAACTGTtcaatttatttgttattaagattatttgggttccaaaacattaattaaaaaaattataattgcaATATCACACAATAATTGATAAACACTTCATATTGcgtattactttatttaaaaatatatttttattcttatatgcAAGATACGCACaaaaataccatttt

Function

symbol description
star Predicted to enable cholesterol binding activity. Acts upstream of or within oocyte maturation. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial intermembrane space. Is expressed in endocrine system; forebrain; gonad; and interrenal primordium. Human ortholog(s) of this gene implicated in congenital adrenal hyperplasia. Orthologous to human STAR (steroidogenic acute regulatory protein).

NR:

description
steroidogenic acute regulatory protein, mitochondrial precursor

GO:

id name namespace
GO:0008203 cholesterol metabolic process biological_process
GO:0006694 steroid biosynthetic process biological_process
GO:0030301 cholesterol transport biological_process
GO:0005739 mitochondrion cellular_component
GO:0015485 cholesterol binding molecular_function

KEGG:

id description
K16931 STAR; steroidogenic acute regulatory protein, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670479.1 True 1478 mRNA 0.46 7 30064340 30068306

Neighbor

gene id symbol gene type direction distance location
LOC103046047 LOC107756834,LOC107548280,LOC107691567,LOC107702864 coding upstream 2975 29968750 ~ 30061365 (+)
lsm1 lsm1,LOC107571959,LOC107548281 coding upstream 97673 29964074 ~ 29966667 (+)
crybb2 crybb2,LOC108265494,LOC108410876,LOC108234953 coding upstream 316869 29743149 ~ 29747471 (+)
LOC103025277 LOC108413761 coding upstream 1173962 28886470 ~ 28890378 (+)
LOC103028136 NA coding upstream 1269681 28790400 ~ 28794659 (+)
elmod3 elmod3,LOC107702863,LOC107756833,LOC107722433,LOC107571955 coding downstream 4413 30072719 ~ 30089265 (+)
LOC103043923 NA coding downstream 32451 30100757 ~ 30121117 (+)
ccdc157 NA coding downstream 70501 30138807 ~ 30140525 (+)
LOC103042579 NA coding downstream 78658 30146964 ~ 30151071 (+)
LOC103042059 NA coding downstream 84130 30152436 ~ 30157896 (+)
G55429 NA non-coding upstream 118617 29945437 ~ 29945723 (+)
G55428 NA non-coding upstream 119184 29944930 ~ 29945156 (+)
G55416 NA non-coding upstream 162960 29896560 ~ 29901380 (+)
G55411 NA non-coding upstream 220019 29843419 ~ 29844321 (+)
G55377 NA non-coding upstream 270474 29791220 ~ 29793866 (+)
G55449 sf3a1,LOC107550953,LOC107702803,LOC107575440,LOC107564451 non-coding downstream 64809 30133115 ~ 30134737 (+)
G55499 NA non-coding downstream 248094 30316400 ~ 30321692 (+)
G55507 NA non-coding downstream 358265 30426571 ~ 30430122 (+)
G55525 NA non-coding downstream 414605 30482911 ~ 30494675 (+)
G55533 NA non-coding downstream 461559 30529865 ~ 30530274 (+)
G55218 NA other upstream 1309523 28754030 ~ 28754817 (+)
asphd2 asphd2,LOC107687974,LOC107703165 other upstream 1407522 28646064 ~ 28656818 (+)
ipo11 ipo11 other upstream 2125951 27814215 ~ 27938389 (+)
G54841 NA other upstream 2351762 27703772 ~ 27712578 (+)
LOC107197454 NA other upstream 2395678 27663782 ~ 27668662 (+)
G55502 NA other downstream 278710 30347016 ~ 30625046 (+)
G55532 cgnl1 other downstream 460556 30528862 ~ 30550061 (+)
G55831 LOC107691557,LOC108411168 other downstream 1852514 31920820 ~ 31924095 (+)
G55844 adam9,LOC107591921,LOC107702867,LOC107722987 other downstream 1906375 31974681 ~ 31977419 (+)
LOC103024127 kcnip3a,LOC108440810,LOC107753121,LOC107687962,LOC107684506,LOC107566017,LOC108264878,LOC101482209,LOC107553838 other downstream 1991103 32059409 ~ 32150570 (+)

Expression


Co-expression Network