LOC103045855 (LOC108438352,LOC108265896)


Basic Information

Item Value
gene id LOC103045855
gene name LOC108438352,LOC108265896
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 36605407 ~ 36641563 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670590.1
tgattgcaTTAGATAAATGCGTTTAATCGGAGTGGATTCTGTCTATTCAGGTTATCTGAGAGTTCTATTCTTTGTCCGATTGTTATTAGCGGCCACTCGAGGGAACTCTTCAGCGGCCGAGAGCCGAAAGCACAATGAAACCCCGGCGATCTCCCCTCTCAGCCACAGCTCCCGAGCCTAATGCACATTTATCTAgcgtctctcctctctcctccgcCTCTCCATTATACACTCATCCTCCTGTCTGCCGTCTGTGAATCTGTAATTACAGGTAACGACGTCGACGGGAAGCAAATGCTTCTCCTGCCGCTCTGCAGCCGAGAGGGAGAAATGGATGGAGAACCTGAGGCGAGCCGTGCATCCCAACAAgGATAACAGTCGGCGAGTGGAGAACATGCTGAAATGTTGGATTATCGAGGCGAAGGACCTGCCGGCGAAGAAGAAGTACTTCTGTGAACTGTGTCTGGACGACACGCTTTACGCACGGACTACCTGCAAACTCAAAACGGACAACGTTTTCTGGGGCGAACACTTTGAGTTCAACAACCTGCCGTCAGCCAAGAGCATCACCGTGCACCTGTACAAGGAGAcggacaagaagaagaagaaggacaaGAACAACTACGTGGGCCTGGTGAACGTTCCCATCATGGCCGTGAGCGGGCGGCAGTTCGTGGAGAAGTGGTACACGGTCAGCACCCCCAACCCCAACAAGGGCAAGGCCCCGGGGCCCATGCTGCGCATGAAGTGCCGCTACCAGAGCATGAGCATCCTCCCTATGGAGCTGTACAAGGAGTTCGCAGAGTACATCACTAATAACTACATGCTGCTGTGCTCCGTGCTGGAGCCGGCGCTCAGCGTCAAGAGCAAGGAGGAGATGGCCAGCGCTCTCGTCCACATCCTCCAGAGCACCGGGAAAGCCAAGGATTTCCTGACAGATCTGATGATGTCTGAGGTGGATCGGTGCGGAGACAACGAGCATCTCATCTTCAGAGAGAACACTCTCGCCACCAAAGCTATAGAGGAGTACCTGAAACTGGTGGGACAGAAGTACCTGCAGGACGCGCTGGGCGAGTTTATTAAAGCTCTGTACGAGTCAGACGAAAACTGTGAAGTGGATCCATCAAAGTGCTCCTCTAGTGATCTCCTGGAGCACCAGGGAAATCTGAAGATGTGCTGTGAGCTCGCCTTCTGCAAGATCATCAACTCCTACTGCGTGTTCCCGCGTGAGCTGAAGGAGGTGTTCGCGTCGTGGCGGCAGGAGTGTGGTAACCGAGGACGTCCGGACATCAGCGAGCGTCTGATCAGCGCCTCCCTCTTCCTGCGCTTCCTGTGTCCCTCCATCATGTCCCCCTCGCTCTTCGACCTCATGCAGGAATACCCTGACGACCGCACCGCCCGCACGCTCACGCTCATCGCCAAGGTCACGCAGAACCTCGCCAACTTCACCAAgttcgGCAGTAAGGAGGAGTACATGTCCTTCATGAATCAGTTCCTGGAGCACGAGTGGACCAACATGCAGCGCTTCCTGCTGGAGATCTCCAACCCAGAGACCATCTCCAACACGGCCGGGTTCGAGGGATACATCGACCTCGGCCGAGAACTCTCCACCCTCCACTCCTTACTGTCAGAGGCCATCACCCAGCTCGACCAgAGCACGGCGGCTAAGCTGGGGCCGCTGGTGCGGATCCTGAGGGACGTGAACGTGGCCCTGACGAACCCCGCCGGGGCCCCGGTGGCGTCCCCCACGGAGCGGGTGGGATCACCCAGCCTGCCCGGCTGCAGCGTCTCAACCGGCCTGCAGAAACTCGTCATGGACACCGAGCTCACCGGactgtttttttttaacaggttgGTGGATTTCACCAGGCTGCCGTCTCCGACCCCCGAAAACAAGGACCTGTTCTTCGTCACCAGGAATTCTGTCATCCAGCCCTCTCCCGCCCGGAGCTCCAGCTACTCCGAGGCCAACGAGCCGGATGTTCAGCTCCCCAACGGCAGCAAGAGTCTGTCCATGGTGGACCTGCAGGACAGCCGGAGCCTGGAGGGCCCCTGCACCTCCTCCAGCGACCCCTCCAATGACGGGCAGGGTAACGGGGCCTGGAGCGCGCGCACCCTTAAAGGCAACATGGTGACGGGACCCACTCTGAGGAAAACGGCCCAGACCCCCACCACCCCAAGCACAGAGACCGCCCCCGGACGACCCCAGCTGCTGGCGCCGCTCTCCTTCCAGAACCCGGTGTATCAGATGGCGGCCGGTCTGCCCGTGTCGCCCCGCGGGGGCGGAGCCGCCGATTCGGGCTCAGAGTGCCACAGCTCCATCAGCTCCCAGGGCAACGCGGAGGACCCGGCGCCGCCGGTCACCAAACCCACGTTCATCACCCAGGCCAGCACGGTGGCGCCACccggaggagcaggaggaggcgGCAGCGACGAGTTCGTAAGACGCTCGGGGGAGTTCACGCGGAGGCAGCTGTCCCTTACCGAGAACCAGCACCAGTCCAACGTCCCCAGGCAGAACAGCGCCGGCCCCCAGAGAAGGATAGACCAGCCTCCCCCACCCACAGTCACCAGAGGCCGCACCCCTCCCAGCATGCTCAACACCGCCCCCTACCCACGGCCCTCCAGCGGCAGCATGATGTCGTCCTCGCCTGACTGGCCCAGCAGCAGCGCCCGGCTCAGACAGCAGTCCTCCTCCTCGAAAGGGGACAGCCCGGAGACAAAGCAGCGCACCCTACACAAACAGGCCCCGTCTCCAGTGAATCCCGGTGCTCTGGACCGCACTGCTGCCTGGTTGCTAAATATGAATGTGCAGTATCTGGAGCAGGAAGGAATTGACCCAGATTCCAGACACAGGGAGGACCTCCCAAACAAGGACGAGCTCTCTCAGACCGAAAAGTATCAGCAGGAGATCTCCATGCTGCAGGAGCGTCTGCGTCTGTCTGCGAAGAAGCTGGAGGAGTACGAGGTGCGTCTGCAGGGTCAGGACGACCAGACGCAGAAGATGCTGCTGGAGTACCAGGCCCGGCTGGAGGACACGGAGGAGCGTCTGCGCCGGCAGCAGGAGGACAAAGAGATGCAGATGAAGAGCATCATCACCAGGTTAATGTCAGTTGAGGAGGAGCTGAAGAAGGATCACGCGGACATGCAGGCCATCGTCGACTCCAAACAGAAGATCATCGAAGCCCAGgAGAAGCGTATAGCGTCTCTGGACGCGGCTAACGCTCGTCTGATGAGCGCTCTCTCTCAGCTGAAGGAGCGCTACAGCATGCAGACCCGTAACGGCATCTCGCCCACCAACCCCAGCAAGCTGCAGATCACGGAGAACGGCGAGTTCCGCAACAGCAGCAACTGCTAGCGAGGCCGGATCACCCCGGCAGGGACAAGGGCTATGGGTAAAACCAACCAACGGAAAACAATCACTCACTCTGGACTTTAACTACTAAAAcgaaaggaacaaaaaaaaa
>XM_022670592.1
caTTAGATAAATGCGTTTAATCGGAGTGGATTCTGTCTATTCAGGTTATCTGAGAGTTCTATTCTTTGTCCGATTGTTATTAGCGGCCACTCGAGGGAACTCTTCAGCGGCCGAGAGCCGAAAGCACAATGAAACCCCGGCGATCTCCCCTCTCAGCCACAGCTCCCGAGCCTAATGCACATTTATCTAgcgtctctcctctctcctccgcCTCTCCATTATACACTCATCCTCCTGTCTGCCGTCTGTGAATCTGTAATTACAGGTAACGACGTCGACGGGAAGCAAATGCTTCTCCTGCCGCTCTGCAGCCGAGAGGGAGAAATGGATGGAGAACCTGAGGCGAGCCGTGCATCCCAACAAgGATAACAGTCGGCGAGTGGAGAACATGCTGAAATGTTGGATTATCGAGGCGAAGGACCTGCCGGCGAAGAAGAAGTACTTCTGTGAACTGTGTCTGGACGACACGCTTTACGCACGGACTACCTGCAAACTCAAAACGGACAACGTTTTCTGGGGCGAACACTTTGAGTTCAACAACCTGCCGTCAGCCAAGAGCATCACCGTGCACCTGTACAAGGAGAcggacaagaagaagaagaaggacaaGAACAACTACGTGGGCCTGGTGAACGTTCCCATCATGGCCGTGAGCGGGCGGCAGTTCGTGGAGAAGTGGTACACGGTCAGCACCCCCAACCCCAACAAGGGCAAGGCCCCGGGGCCCATGCTGCGCATGAAGTGCCGCTACCAGAGCATGAGCATCCTCCCTATGGAGCTGTACAAGGAGTTCGCAGAGTACATCACTAATAACTACATGCTGCTGTGCTCCGTGCTGGAGCCGGCGCTCAGCGTCAAGAGCAAGGAGGAGATGGCCAGCGCTCTCGTCCACATCCTCCAGAGCACCGGGAAAGCCAAGGATTTCCTGACAGATCTGATGATGTCTGAGGTGGATCGGTGCGGAGACAACGAGCATCTCATCTTCAGAGAGAACACTCTCGCCACCAAAGCTATAGAGGAGTACCTGAAACTGGTGGGACAGAAGTACCTGCAGGACGCGCTGGGCGAGTTTATTAAAGCTCTGTACGAGTCAGACGAAAACTGTGAAGTGGATCCATCAAAGTGCTCCTCTAGTGATCTCCTGGAGCACCAGGGAAATCTGAAGATGTGCTGTGAGCTCGCCTTCTGCAAGATCATCAACTCCTACTGCGTGTTCCCGCGTGAGCTGAAGGAGGTGTTCGCGTCGTGGCGGCAGGAGTGTGGTAACCGAGGACGTCCGGACATCAGCGAGCGTCTGATCAGCGCCTCCCTCTTCCTGCGCTTCCTGTGTCCCTCCATCATGTCCCCCTCGCTCTTCGACCTCATGCAGGAATACCCTGACGACCGCACCGCCCGCACGCTCACGCTCATCGCCAAGGTCACGCAGAACCTCGCCAACTTCACCAAgttcgGCAGTAAGGAGGAGTACATGTCCTTCATGAATCAGTTCCTGGAGCACGAGTGGACCAACATGCAGCGCTTCCTGCTGGAGATCTCCAACCCAGAGACCATCTCCAACACGGCCGGGTTCGAGGGATACATCGACCTCGGCCGAGAACTCTCCACCCTCCACTCCTTACTGTCAGAGGCCATCACCCAGCTCGACCAgAGCACGGCGGCTAAGCTGGGGCCGCTGGTGCGGATCCTGAGGGACGTGAACGTGGCCCTGACGAACCCCGCCGGGGCCCCGGTGGCGTCCCCCACGGAGCGGGTGGGATCACCCAGCCTGCCCGGCTGCAGCGTCTCAACCGGCCTGCAGAAACTCGTCATGGACACCGAGCTCACCGGgttgGTGGATTTCACCAGGCTGCCGTCTCCGACCCCCGAAAACAAGGACCTGTTCTTCGTCACCAGGAATTCTGTCATCCAGCCCTCTCCCGCCCGGAGCTCCAGCTACTCCGAGGCCAACGAGCCGGATGTTCAGCTCCCCAACGGCAGCAAGAGTCTGTCCATGGTGGACCTGCAGGACAGCCGGAGCCTGGAGGGCCCCTGCACCTCCTCCAGCGACCCCTCCAATGACGGGCAGGGTAACGGGGCCTGGAGCGCGCGCACCCTTAAAGGCAACATGGTGACGGGACCCACTCTGAGGAAAACGGCCCAGACCCCCACCACCCCAAGCACAGAGACCGCCCCCGGACGACCCCAGCTGCTGGCGCCGCTCTCCTTCCAGAACCCGGTGTATCAGATGGCGGCCGGTCTGCCCGTGTCGCCCCGCGGGGGCGGAGCCGCCGATTCGGGCTCAGAGTGCCACAGCTCCATCAGCTCCCAGGGCAACGCGGAGGACCCGGCGCCGCCGGTCACCAAACCCACGTTCATCACCCAGGCCAGCACGGTGGCGCCACccggaggagcaggaggaggcgGCAGCGACGAGTTCGTAAGACGCTCGGGGGAGTTCACGCGGAGGCAGCTGTCCCTTACCGAGAACCAGCACCAGTCCAACGTCCCCAGGCAGAACAGCGCCGGCCCCCAGAGAAGGATAGACCAGCCTCCCCCACCCACAGTCACCAGAGGCCGCACCCCTCCCAGCATGCTCAACACCGCCCCCTACCCACGGCCCTCCAGCGGCAGCATGATGTCGTCCTCGCCTGACTGGCCCAGCAGCAGCGCCCGGCTCAGACAGCAGTCCTCCTCCTCGAAAGGGGACAGCCCGGAGACAAAGCAGCGCACCCTACACAAACAGGCCCCGTCTCCAGTGAATCCCGGTGCTCTGGACCGCACTGCTGCCTGGTTGCTAAATATGAATGTGCAGTATCTGGAGCAGGAAGGAATTGACCCAGATTCCAGACACAGGGAGGACCTCCCAAACAAGGACGAGCTCTCTCAGACCGAAAAGTATCAGCAGGAGATCTCCATGCTGCAGGAGCGTCTGCGTCTGTCTGCGAAGAAGCTGGAGGAGTACGAGGTGCGTCTGCAGGGTCAGGACGACCAGACGCAGAAGATGCTGCTGGAGTACCAGGCCCGGCTGGAGGACACGGAGGAGCGTCTGCGCCGGCAGCAGGAGGACAAAGAGATGCAGATGAAGAGCATCATCACCAGGTTAATGTCAGTTGAGGAGGAGCTGAAGAAGGATCACGCGGACATGCAGGCCATCGTCGACTCCAAACAGAAGATCATCGAAGCCCAGgAGAAGCGTATAGCGTCTCTGGACGCGGCTAACGCTCGTCTGATGAGCGCTCTCTCTCAGCTGAAGGAGCGCTACAGCATGCAGACCCGTAACGGCATCTCGCCCACCAACCCCAGCAAGCTGCAGATCACGGAGAACGGCGAGTTCCGCAACAGCAGCAACTGCTAGCGAGGCCGGATCACCCCGGCAGGGACAAGGGCTATGGGTAAAACCAACCAACGGAAAACAATCACTCACTCTGGACTTTAACTACTAAAAcgaaaggaacaaaaaaaaa

Function

NR:

description
PREDICTED: disabled homolog 2-interacting protein-like isoform X5

GO:

id name namespace
GO:0051056 regulation of small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670590.1 True 3467 mRNA 0.59 12 36605407 36641563
XM_022670592.1 False 3443 mRNA 0.59 12 36605407 36641557

Neighbor

gene id symbol gene type direction distance location
med27 med27,LOC107665006,LOC107557205,LOC107725311,LOC107757301 coding downstream 112693 36412872 ~ 36492714 (-)
LOC103035014 rapgef1,rapgef1a,LOC108265900,LOC107557186,LOC107598978 coding downstream 219910 36344602 ~ 36385497 (-)
anapc7 anapc7 coding downstream 264904 36332468 ~ 36340503 (-)
c6h9orf116 LOC103023176 coding downstream 395748 36208216 ~ 36209659 (-)
LOC103036273 pip5k1bb,LOC108412809,LOC108265367,LOC105901155,LOC107664977,LOC106585038 coding downstream 534412 36016893 ~ 36070995 (-)
LOC103045561 phf19,LOC107557185,LOC107599052,LOC106585785 coding upstream 113603 36755166 ~ 36778310 (-)
LOC103045252 LOC108438351 coding upstream 155167 36796730 ~ 36818211 (-)
LOC107197187 NA coding upstream 402238 37043801 ~ 37048616 (-)
slc2a6 slc2a6,LOC107599026 coding upstream 409157 37050720 ~ 37061698 (-)
LOC111192681 si:ch211-240g9.1,LOC108438565,LOC108264952,LOC107598959,LOC107653411,LOC105925911,LOC100700110 coding upstream 748879 37390442 ~ 37476012 (-)
G57012 NA non-coding downstream 1979 36600038 ~ 36603428 (-)
G57010 NA non-coding downstream 192658 36411235 ~ 36412749 (-)
G57013 NA non-coding downstream 196955 36408175 ~ 36408452 (-)
G57001 NA non-coding downstream 264371 36298059 ~ 36341036 (-)
G57000 NA non-coding downstream 273839 36314025 ~ 36331568 (-)
G57043 NA non-coding upstream 184204 36825767 ~ 36839252 (-)
G57107 NA non-coding upstream 401764 37043327 ~ 37058088 (-)
G57121 nras,LOC107598969,LOC107725308 non-coding upstream 475881 37117444 ~ 37207042 (-)
G57147 dennd2c,LOC108438557,LOC107665005,LOC107674357,LOC107566809,LOC107734514,LOC107598967 non-coding upstream 533738 37175301 ~ 37181186 (-)
G57149 bcas2,LOC107566810,LOC107734517,LOC107674303 non-coding upstream 542877 37184440 ~ 37186552 (-)
G57014 NA other downstream 202109 36402850 ~ 36403298 (-)
G56987 atp2a2,atp2a2a,LOC108265716,LOC107580452 other downstream 284712 36319056 ~ 36320695 (-)
LOC103023491 fnbp1,LOC107599022,LOC108264955 other downstream 343862 36226129 ~ 36261545 (-)
unc45b unc45b other downstream 597420 35993525 ~ 36007987 (-)
LOC103036583 zgc:103670,LOC108412807,LOC107725322,LOC107598984,LOC107698990,LOC107720814,LOC107557201,LOC108265363 other downstream 612905 35971730 ~ 35992502 (-)
LOC107196826 LOC108438352,LOC106580127,LOC108265896,LOC106585786 other upstream 38603 36680166 ~ 36746634 (-)
LOC111192678 phf19 other upstream 143745 36785308 ~ 36792444 (-)
brpf3 brpf3,LOC108265695 other upstream 639550 37281113 ~ 37299607 (-)
LOC103043112 LOC108438563,LOC108265696,LOC107725303,LOC107653398,LOC107598961,LOC107674288,LOC107734522,LOC107570980,LOC105889772 other upstream 660484 37302047 ~ 37326736 (-)
LOC111192682 NA other upstream 1619554 38261117 ~ 38305466 (-)

Expression


Co-expression Network