slc2a6 (slc2a6,LOC107599026)


Basic Information

Item Value
gene id slc2a6
gene name slc2a6,LOC107599026
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 37050720 ~ 37061698 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670597.1
TCTCTGTTATCTGTAAAAGAGGACGGACTTTAGAGATCCTCATTTTTACTTTATCAGTGTGAGACTGAGGAGCCATGAGCCGAGAACACAGCGAAAGATCTCCTCTACTGCAGAATCAGCCACAGAAGAAAATCAGAAATGGCTGGCTCTTCCTCGCTGTGTTCTCAGCAGTTTTGGGCAATTTTAACTTTGGATTTTCTCTGGTGTTTCCCTCACCGGTGATCCCACAACTACAAGCGGGTGATGACCCACGCCTGCGCATGGACGTCCATCAAGTCTCCTGGTTTGGTtctattttcacactggGAGCCGCCGCAGGGGGTCTGAGCGCCATGCTGATGAACGACAGAATTGGGCGCAAGCTGAGCATCATGATATCTGCGGTGCCGTCCACCGCGGGTTACCTGGTGATGGGGGCAGCACAGGGGTTCTGGATGCTTCTCCTGGGCAGATTTCTCACCGGCATTGCTGCTGGCATCACCGCCAGCTCTATTCCTGTGTATGTGTCGGAGATTTCACATCCAGGTGTTAGAGGAGCTCTGGGATCTTGCCCTCAGATCACAGCTGTCTTCGGAAGTCTGGCACTCTATGCTCTTGGCTTGGTAATTCCGTGGCGATGGCTGGCTGTGGCTGGGGAAGTTCCTGTTCTGCTTATGTTAATCCTCCTCTGCTTTATGCCAAACTCCCCGCGTTACCTCATCACCCACGGCAAACGGGACGAGGCCTGCGGGGCCCTGAAATGGCTCCGGGGGCCCAATTCAGATTACATGAATGAACTCAACCAAATTGAGCGGAGCGTCAACTCACAGGTTGGAATACAGTGGGCTGATCTTAGGAGTCCTTTCTACTACAAGCCCGTCTTAATCTCTGTGTTTATGAGATTCCTGCAGCAGATGACAGGAATAACACCTATCCTGGTTTATCTGGAGCCTATCTTTCACAAAACAGCCATATCACTGGAACCCAAGTATGACGCAGCATTAGTAGGCGCTGTTCGGCTGCTCTCTGTTATGATTGCAGCCAGTCTAATGGACAAAGCTGGAAGAAAAGCTCTTCTCTACACATCAGCATTTCTAATGTATTTGGCCATGCTATCAATGACCATGTACACCCACACAACACCATGTGATAACAACAGGAACATCACTGTGGATGCAAGCTTGCAACTAACAGAGGGGCATGGAGAATTGACGGGTTCTGTCCCAAATTCCATCACACTCGTTCCCCTCATCAGCGCTATGGTCATCATATTTGGTTATGCGATGGGCTGGGGTCCAATCACCTGGCTGCTGATGTCGGAGATCTTGCCGCTGGGGGCTCGTGGCGTGGCGTCCGGCTTGTGTGTGATGGTCAGCTGGATCACGGCTTTTGCACTGACACAACTCTTCATGCACGCTGTGGACGCTTATGGACTGTTCGTACCGTTCCTGTTCTTCTGCGTTGTCTGCGTGGTGAACATCATATTCACCGCGGTGTGTGTGCCGGAAACGAAGGGGCGGACCCTGGAGGAGATCGAGAACTATTTCAGAACTGGACGCTCCTTCACTATCCTCGACAGTTAACACAACAAACCttcagtggattttttttaaaataaagagactTTGGGTTTTGGCTTGTGTAAAATGAAGAAGAACACAACTAATTTGAGTGATAGTGTAATTACATGTTTACATTAGGGATGTCAGTCatgtgtgatttatttttaatgtatttctgttatttgtttaatCATTTCTCCTGCCTGTTGTAAATATGTAACTACTAatatgtagtatgtagtatgtaatatgtacgtatttttcgcactatgatctattttcatacataaggcgcactggaatctaaagcgcattatgcgacactagtaaggaacagtgagGCTGTGTCAATAGTAGACATTCCaccctgaaataaaaaaaatgcaaaaattcaTTTCAGAGGGgtattcataaataaataaataaattaattaataaatgaaatattaaaatctatgcttactatataatacaataatcattttaatgaaGTGGATGGAGCGTAGTGTCTCCCTAACACTAACTCATTTTAGCAATGTTAATAAACGCTGTTTAACcatttcagaccctgcatccattccAGTGGTCATTatggtcattttttttaaatgttttcttgcaTTTAACATTGATTGAGAGCTGATTGTTGTCCATTAGAATAGAACAAGAACCAGCTAATTAactagtttataaaccaatgaaacagtagcaaTAGAGCCTTTGAGAcaaagtaacagctaatttgtactgatttaatgtgatttagaacacttttggtcatgtttttactgtctaaggatgttttttttttataataaaatgttgatATGAAATATAAAGTATTACA

Function

symbol description
slc2a6 Enables D-glucose transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including heart; integument; liver; pleuroperitoneal region; and yolk. Orthologous to human SLC2A6 (solute carrier family 2 member 6).

NR:

description
solute carrier family 2, facilitated glucose transporter member 6

GO: NA

KEGG:

id description
K08144 SLC2A6, GLUT6; MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670597.1 True 2388 mRNA 0.44 10 37050720 37061698

Neighbor

gene id symbol gene type direction distance location
LOC107197187 NA coding downstream 2104 37043801 ~ 37048616 (-)
LOC103045252 LOC108438351 coding downstream 232509 36796730 ~ 36818211 (-)
LOC103045561 phf19,LOC107557185,LOC107599052,LOC106585785 coding downstream 272410 36755166 ~ 36778310 (-)
LOC103045855 LOC108438352,LOC108265896 coding downstream 409157 36605407 ~ 36641563 (-)
med27 med27,LOC107665006,LOC107557205,LOC107725311,LOC107757301 coding downstream 558006 36412872 ~ 36492714 (-)
LOC111192681 si:ch211-240g9.1,LOC108438565,LOC108264952,LOC107598959,LOC107653411,LOC105925911,LOC100700110 coding upstream 328744 37390442 ~ 37476012 (-)
tbc1d22b tbc1d22b,LOC108438566,LOC107653399,LOC107674367,LOC107734531 coding upstream 486061 37547759 ~ 37599298 (-)
LOC103031835 pim1,LOC103031835,LOC108438567,LOC107584899,LOC107598956,LOC107734527,LOC108265925,LOC107674355,LOC107725309 coding upstream 569359 37631057 ~ 37635455 (-)
LOC103047788 NA coding upstream 746850 37808548 ~ 37842410 (-)
kcnd1 kcnd1,LOC107584898,LOC107601760 coding upstream 792082 37853780 ~ 37958375 (-)
G57043 NA non-coding downstream 211468 36825767 ~ 36839252 (-)
G57012 NA non-coding downstream 447292 36600038 ~ 36603428 (-)
G57010 NA non-coding downstream 637971 36411235 ~ 36412749 (-)
G57013 NA non-coding downstream 642268 36408175 ~ 36408452 (-)
G57000 NA non-coding downstream 719152 36314025 ~ 36331568 (-)
G57121 nras,LOC107598969,LOC107725308 non-coding upstream 55746 37117444 ~ 37207042 (-)
G57147 dennd2c,LOC108438557,LOC107665005,LOC107674357,LOC107566809,LOC107734514,LOC107598967 non-coding upstream 113603 37175301 ~ 37181186 (-)
G57149 bcas2,LOC107566810,LOC107734517,LOC107674303 non-coding upstream 122742 37184440 ~ 37186552 (-)
G57166 trim33 non-coding upstream 168500 37230198 ~ 37237667 (-)
G57176 pqlc2 non-coding upstream 178957 37240655 ~ 37245381 (-)
LOC111192678 phf19 other downstream 258276 36785308 ~ 36792444 (-)
LOC107196826 LOC108438352,LOC106580127,LOC108265896,LOC106585786 other downstream 304086 36680166 ~ 36746634 (-)
G57014 NA other downstream 647422 36402850 ~ 36403298 (-)
G56987 atp2a2,atp2a2a,LOC108265716,LOC107580452 other downstream 730025 36319056 ~ 36320695 (-)
LOC103023491 fnbp1,LOC107599022,LOC108264955 other downstream 789175 36226129 ~ 36261545 (-)
brpf3 brpf3,LOC108265695 other upstream 219415 37281113 ~ 37299607 (-)
LOC103043112 LOC108438563,LOC108265696,LOC107725303,LOC107653398,LOC107598961,LOC107674288,LOC107734522,LOC107570980,LOC105889772 other upstream 240349 37302047 ~ 37326736 (-)
LOC111192682 NA other upstream 1199419 38261117 ~ 38305466 (-)
LOC103030299 fkbp1aa,fkb1b,fkbp1a,LOC103030299,LOC107553142,LOC107574256,LOC107752559,LOC107707744 other upstream 2459846 39521544 ~ 39562921 (-)
G57727 kdm5c,LOC107550909,LOC107747206,LOC107570512 other upstream 3056091 40117789 ~ 40119095 (-)

Expression


Co-expression Network