LOC103033502


Basic Information

Item Value
gene id LOC103033502
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 41457996 ~ 41493671 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670702.1
CAGAAATGATGGATGGCTTTGTGGCTCCTCAGCAACATTCAGGAGATGGAGACAGGCGAAGGAGGTGAGGGAGGCTATGCAGAGACTGCGCCACCTACAGGACAGAGGGCTACTGCAGGCTGCCTTTGAGAAATGGCTACATAGCTCACGGCTGAAGGTACAGATAAGGGAACTACATCAGAGAAGTGACCAGGCTCATTTAGCAAGGATTTTTTCTTACTGGAATGGACTGGTCCTGCACAGAAGAAAGTTGGCGTTACGCTACAGAAGACAACAAACTCTGACTGTGAGAAGCTTCTTCCAGCTGTGGAGAAGAGCACTGGAGCTGCGTCTGCTTCAAAAGCGTTTTCTCATCCTCTTGTTTTTCAAAAGACAGCGAACTTCTCAACACACCAGTGCAGTGCAGGACGAGACAATGACCGTGGCTTTTTCTGGGCAGCACTCTTTCTGTCCATTGGAAGTGCTTTGGGCCAGGCTTGTGCTCCAGATGTTTGTCTACACTTGGAGagagaaattaaagaaacaaCAGCAAGCAAGATGGCATCATGCAGCGCGTGTTAGAGAGAGGCAAAGGACTGAGCTTGTGGAGTGGCACAGACTCGCTCAGACTGAGCTGTCTGACAAAGTGCTGAGATTCAGAGCCAGACTGGCTCAGTTTCATAACTCCCTCTCCACACCAGGCGTCCACAGCTCTTCTGACCCCGGACGTTCTGCAGACTACACAGGCTCAGGGGGACAGcagGCCGTGGCTCTGCAGGTGCTGGTCAGAATGATGCAGCCCGACCTGAGCCTGGCCTTCTCACAGTGGAGGTCAGCGCTCCTCAGCAGCAGGAAGATGAAGCGGCGGGCCGACCTGTTCAGGAACAGCAGGGAACTGACTGGTGTAAGGATGTCCTTCAGCACctggagaacacacacagagatgcaGCAGAGAGCAGACCAGTACAGGgaGAGGGTGCTGCTCTCTCACTGTGTAACTGACTGGAGAACGCTGATGTGGTGCGGACGCAGAGAACGTTCTCTACAGCTGCAGGCCGTTCACTGCCATCAGACCAGACTACTGAAACACTGCTTTACAGCGTGGCACAGACAGGCTGCAGGGTCTGTACCGGACAGTAGGCAGAGGTGGCTGGAGCAGAGGGTGGAGAGCCGTTGCCTCAGCCGGGCTTTCTCCACGTGGGCAGCACGTGAGAGACAGCAGAAGGCCGTCAGAGCATTCTGTACCCAAGTGCTTCTGAGGAGGGTGTTTGCTGCATGGCAGAAGCGAGTGCAGTGCCATAAGGAGAGACAGGAGGCAGCTTTGTCCTTTGTGCAGCACAGGCTCTGCAGCGTGGTCTTCTCCCAGTGGAAGAGCAGCTGCGCCCGGCAGCAGCTGGCCAACAGCAGAGCCAAACACACGCTCCGCCTGAGTGCTAAACACATGCTGCAGGCCTGGAgagaatacacacacaACAGGTGTCTCATGCATGTCCAGCTGTGTGCATTCagagagggaagagaaagaGCCTTGAAGAGAAAAGCTATTCTCATCTGGCAGCAAGCAGTGGAAAATATAAAGATAGCCCAACAACTTTATCAACAAGCTCTGCTCTGCAGattttattttaagtggctTGATGTGTACGAGCGTAATAGAGAGctgcactgtctctctctggaTATACAGGAGCTCAGAACTCGAAGGCTACAGCAGAATTTCTTTTCCCTCTGGAAACTACAGTTCCTCCATATCCGTACCAAAAAGCAGCGTCTCCATCTGCAGGTAGCTAACTTCCAGTTCCACCAAGCAGTGAGGCATCGAGACCAGCATGTTCTGACCCGTAGTCTGAACCTGTGGAGGTGGAAACTGGATctgaagaggagaagaagagagataGCTCTGGGTGTTGTGAGGATTTGGAGAGGGTTTGCCTTGCGGTGCAAAGAGTTGAGAGAGAGGGTTCAAAACGTCCAGAAATTGCAGCTGTCTCATGCATTCAGATACTGGGCAAGAACAAAGAGACTGAGCATCAAGGCGAGAGAACATCACACGCAGAAGCAGAGAAGAAGGGTTCTGCTAGGCTGGCATGTCCACACAGTTTGGGCTCAGAGGATGCGCTACAGTGAGGCCTGCTTCCAGTACAGGATGGAGCTCAGGGTGATGGGCTTCTGTCTCAGCCTGTGGAGGAGGGCACTGGTCCAGACCCAGAACCAGCAGTGTGTTTTGGAGGACCTCCTCAGCCTCTATCACAGCAGACTGACAGCACAGGCCTTTCAGAATTGGAGAGCAGCCACCACACGGCAAAGAGCGGCCAAGAACATCAACACAGCTTTACTGCGAAAGTGGTTTGTGCGCTGGAAACAACGAAGAGATGCCCTTAGAACAGCTGATCAGTTCCTGGCTCAAAAGCAGAAAGAAGAAATGCGGCTGATTTTAACATCTTGGTCATTATGGGTGAAAGAGCATAAGGGCCGCAGACAGATGGAGGAAGCTGTGCGTCTCTGGTTGGATGGCAGGAGAGTGTGTGCAGTTTTCCATCAGTGGGTTAAAGTGTACCGCCAGCACCAGGTGGCCTGTTATCACAGCCAAATACACCTTTTACACAGATCTTTCTGGACATGGAGGGCTGCTGCCATAGAGACAAAGCGGAAGTGTCAGACTGTTGAGATACGACTTCAGCACCATGAGATGCGGTCAGCCTTCAGAACCTGGAGGTGGGCTACAGCATCCCATAAGGCCGTGCGTTACTTCACACAGCGAGTGAAGGAAGCAGACAGTAGGAGACTTCTGAGTGCTGTACTCCAAGCATGGCATGAAAAGACCCAGATTCAGAAGCAGCGTGATTTTCATCTTAGTGACAAATATTTTAACCTCTGGGCACTGGAAGTGCAAAGAAGACAGTCTGTGAGACTTTTGTGGAATAGAAGAAGGACTAAGTGGATGAGACTTTGGCGGTACAGGCTGGTGGAGCGGAGAGAACAGAGGGAACTAATTTCTCTCTACTGGGCTTCTTGGAAGAGTCAGACTGCTGCCTCACTGCTGTACAAACAACAACCTCAGCGTAAATCTCTGCAGAAAGCATGGCTCACCTGGAGAAAGAGGCACATCAGGAACAGAGTGGCTGCTGAGTACACGGCCAGCATTAACAGAGCCCTGCTGCTGAAGGCACTTCGTGCGTGGTGGCGGCGGGCCCTTGTTTCAGGCTCTCTGCCCAGTAGAGCTCCGGTTCGCTCCTACTCCCTCTGACTGACCTGCTGCTGAGCTCCAGGCCAAGAGCAGCAGAACCTTCCAGACTGCAGTTAACTTGACACCCTCATTAAACTTCCTGGAAACCATCTAAACTTTAACCTTAAATTCAGAGCAGCCTCTCTGCACTCTGAATCATTCTGCAGATCCTACCCTTTAAATAAAACCACCGTCAGCTATATTAAACCCTGCAGGTCCTGACAGGATTCACTTTCACTCCTTCCAAGAAGCCAACTCCCTTCTCTCCTGACCCTTTACCCACTTGGACAGCAGTCAAAGCCGCACACTTCTCCTGCAGCCTTATTATAACTGTAGAGCTCAGCTTTCTGCTTCTGTTCTAGTcctgacagtaaaaaaaagccaACATTCAAACTGGGAAATAATTAACTAGTTGTATAAAAAAAGATGGCACCGATCCAATACCTGGTATTGCTACTGGATAATGGATCAAATAGAGCAGGTCCTATCTGAAACTGTGACAAATTTAGCCTGGAGTAATACATAAAATGCTTGTGAAGCCCCTTTTACACCAAAACTTTTCCAGACATTATTAatggtgtaagaaaatatagagaattttatgttttgcaatactttttttattaaattctcaAAAACA
>XM_022670703.1
CAGAAATGATGGATGGCTTTGTGGCTCCTCAGCAACATTCAGGAGATGGAGACAGGCGAAGGAGGTGAGGGAGGCTATGCAGAGACTGCGCCACCTACAGGACAGAGGGCTACTGCAGGCTGCCTTTGAGAAATGGCTACATAGCTCACGGCTGAAGGTACAGATAAGGGAACTACATCAGAGAAGTGACCAGGCTCATTTAGCAAGGATTTTTTCTTACTGGAATGGACTGGTCCTGCACAGAAGAAAGTTGGCGTTACGCTACAGAAGACAACAAACTCTGACTGTGAGAAGCTTCTTCCAGCTGTGGAGAAGAGCACTGGAGCTGCGTCTGCTTCAAAAGCGTTTTCTCATCCTCTTGTTTTTCAAAAGACAGCGAACTTCTCAACACACCAGTGCAGTGCAGGACGAGACAATGACCGTGGCTTTTTCTGGGCAGCACTCTTTCTGTCCATTGGAAGTGCTTTGGGCCAGGCTTGTGCTCCAGATGTTTGTCTACACTTGGAGagagaaattaaagaaacaaCAGCAAGCAAGATGGCATCATGCAGCGCGTGTTAGAGAGAGGCAAAGGACTGAGCTTGTGGAGTGGCACAGACTCGCTCAGACTGAGCTGTCTGACAAAGTGCTGAGATTCAGAGCCAGACTGGCTCAGTTTCATAACTCCCTCTCCACACCAGGCGTCCACAGCTCTTCTGACCCCGGACGTTCTGCAGACTACACAGGCTCAGGGGGACAGcagGCCGTGGCTCTGCAGGTGCTGGTCAGAATGATGCAGCCCGACCTGAGCCTGGCCTTCTCACAGTGGAGGTCAGCGCTCCTCAGCAGCAGGAAGATGAAGCGGCGGGCCGACCTGTTCAGGAACAGCAGGGAACTGACTGGTGTAAGGATGTCCTTCAGCACctggagaacacacacagagatgcaGCAGAGAGCAGACCAGTACAGGgaGAGGGTGCTGCTCTCTCACTGTGTAACTGACTGGAGAACGCTGATGTGGTGCGGACGCAGAGAACGTTCTCTACAGCTGCAGGCCGTTCACTGCCATCAGACCAGACTACTGAAACACTGCTTTACAGCGTGGCACAGACAGGCTGCAGGGTCTGTACCGGACAGTAGGCAGAGGTGGCTGGAGCAGAGGGTGGAGAGCCGTTGCCTCAGCCGGGCTTTCTCCACGTGGGCAGCACGTGAGAGACAGCAGAAGGCCGTCAGAGCATTCTGTACCCAAGTGCTTCTGAGGAGGGTGTTTGCTGCATGGCAGAAGCGAGTGCAGTGCCATAAGGAGAGACAGGAGGCAGCTTTGTCCTTTGTGCAGCACAGGCTCTGCAGCGTGGTCTTCTCCCAGTGGAAGAGCAGCTGCGCCCGGCAGCAGCTGGCCAACAGCAGAGCCAAACACACGCTCCGCCTGAGTGCTAAACACATGCTGCAGGCCTGGAgagaatacacacacaACAGGTGTCTCATGCATGTCCAGCTGTGTGCATTCagagagggaagagaaagaGCCTTGAAGAGAAAAGCTATTCTCATCTGGCAGCAAGCAGTGGAAAATATAAAGATAGCCCAACAACTTTATCAACAAGCTCTGCTCTGCAGattttattttaagtggctTGATGTGTACGAGCGTAATAGAGAGctgcactgtctctctctggaTATACAGGAGCTCAGAACTCGAAGGCTACAGCAGAATTTCTTTTCCCTCTGGAAACTACAGTTCCTCCATATCCGTACCAAAAAGCAGCGTCTCCATCTGCAGGTAGCTAACTTCCAGTTCCACCAAGCAGTGAGGCATCGAGACCAGCATGTTCTGACCCGTAGTCTGAACCTGTGGAGGTGGAAACTGGATctgaagaggagaagaagagagataGCTCTGGGTGTTGTGAGGATTTGGAGAGGGTTTGCCTTGCGGTGCAAAGAGTTGAGAGAGAGGGTTCAAAACGTCCAGAAATTGCAGCTGTCTCATGCATTCAGATACTGGGCAAGAACAAAGAGACTGAGCATCAAGGCGAGAGAACATCACACGCAGAAGCAGAGAAGAAGGGTTCTGCTAGGCTGGCATGTCCACACAGTTTGGGCTCAGAGGATGCGCTACAGTGAGGCCTGCTTCCAGTACAGGATGGAGCTCAGGGTGATGGGCTTCTGTCTCAGCCTGTGGAGGAGGGCACTGGTCCAGACCCAGAACCAGCAGTGTGTTTTGGAGGACCTCCTCAGCCTCTATCACAGCAGACTGACAGCACAGGCCTTTCAGAATTGGAGAGCAGCCACCACACGGCAAAGAGCGGCCAAGAACATCAACACAGCTTTACTGCGAAAGTGGTTTGTGCGCTGGAAACAACGAAGAGATGCCCTTAGAACAGCTGATCAGTTCCTGGCTCAAAAGCAGAAAGAAGAAATGCGGCTGATTTTAACATCTTGGTCATTATGGGTGAAAGAGCATAAGGGCCGCAGACAGATGGAGGAAGCTGTGCGTCTCTGGTTGGATGGCAGGAGAGTGTGTGCAGTTTTCCATCAGTGGGTTAAAGTGTACCGCCAGCACCAGGTGGCCTGTTATCACAGCCAAATACACCTTTTACACAGATCTTTCTGGACATGGAGGGCTGCTGCCATAGAGACAAAGCGGAAGTGTCAGACTGTTGAGATACGACTTCAGCACCATGAGATGCGGTCAGCCTTCAGAACCTGGAGGTGGGCTACAGCATCCCATAAGGCCGTGCGTTACTTCACACAGCGAGTGAAGGAAGCAGACAGTAGGAGACTTCTGAGTGCTGTACTCCAAGCATGGCATGAAAAGACCCAGATTCAGAAGCAGCGTGATTTTCATCTTAGTGACAAATATTTTAACCTCTGGGCACTGGAAGTGCAAAGAAGACAGTCTGTGAGACTTTTGTGGAATAGAAGAAGGACTAAGTGGATGAGACTTTGGCGGTACAGGCTGGTGGAGCGGAGAGAACAGAGGGAACTAATTTCTCTCTACTGGGCTTCTTGGAAGAGTCAGACTGCTGCCTCACTGCTGTACAAACAACAAGTGAGCCTCAGCGTAAATCTCTGCAGAAAGCATGGCTCACCTGGAGAAAGAGGCACATCAGGAACAGAGTGGCTGCTGAGTACACGGCCAGCATTAACAGAGCCCTGCTGCTGAAGGCACTTCGTGCGTGGTGGCGGCGGGCCCTTGTTTCAGGCTCTCTGCCCAGTAGAGCTCCGGTTCGCTCCTACTCCCTCTGACTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670702.1 True 3845 mRNA 0.50 18 41457996 41493671
XM_022670703.1 False 3236 mRNA 0.52 18 41458610 41493671

Neighbor

gene id symbol gene type direction distance location
clcn6 clcn6 coding downstream 21518 41405371 ~ 41436478 (-)
plod1 plod1,plod1a,LOC107698842 coding downstream 161303 41281161 ~ 41296693 (-)
mfn2 mfn2,LOC107748965,LOC107710790,LOC107602467,LOC107678429 coding downstream 179518 41247386 ~ 41278478 (-)
prdm16 prdm16 coding downstream 385757 40763855 ~ 41072239 (-)
tp73 tp73 coding downstream 731517 40666471 ~ 40726479 (-)
pex10 pex10 coding upstream 23294 41516965 ~ 41527890 (-)
LOC103035734 NA coding upstream 485886 41979557 ~ 42034244 (-)
LOC103037059 gpr153,LOC107687122,LOC107693426 coding upstream 593717 42087388 ~ 42177716 (-)
acot7 acot7,LOC107754737 coding upstream 715045 42208716 ~ 42389129 (-)
LOC103037387 LOC108432136 coding upstream 897075 42390746 ~ 42392957 (-)
G58031 mthfr,LOC107687111 non-coding downstream 5014 41449213 ~ 41452982 (-)
G57920 NA non-coding downstream 695824 40761495 ~ 40762172 (-)
G57925 wrap73,LOC107678416,LOC107748967,LOC107710786,LOC107595759 non-coding downstream 709457 40741514 ~ 40748539 (-)
G57916 NA non-coding downstream 793232 40664520 ~ 40664764 (-)
G57788 NA non-coding downstream 1166810 40290977 ~ 40291186 (-)
G58145 NA non-coding upstream 358918 41852589 ~ 41944829 (-)
G58152 NA non-coding upstream 382592 41876263 ~ 41934574 (-)
G58149 plch2 non-coding upstream 406439 41900110 ~ 41903678 (-)
G58159 NA non-coding upstream 417112 41910783 ~ 41911110 (-)
G58185 NA non-coding upstream 558279 42051950 ~ 42052535 (-)
G58022 LOC103032860,LOC108432146 other downstream 59518 41396086 ~ 41398478 (-)
tprg1l tprg1l,LOC107710788,LOC107678419,LOC107698845,LOC106513028 other downstream 701982 40748741 ~ 40756014 (-)
LOC103037008 LOC108442081,LOC105022382,LOC106567250 other downstream 1278855 40165400 ~ 40179141 (-)
G57727 kdm5c,LOC107550909,LOC107747206,LOC107570512 other downstream 1338901 40117789 ~ 40119095 (-)
LOC103030299 fkbp1aa,fkb1b,fkbp1a,LOC103030299,LOC107553142,LOC107574256,LOC107752559,LOC107707744 other downstream 1895075 39521544 ~ 39562921 (-)
G58435 aaas other upstream 1609199 43102870 ~ 43107623 (-)
G58537 NA other upstream 2188653 43682324 ~ 43682684 (-)
G58649 NA other upstream 2874229 44367900 ~ 44368368 (-)
G58678 NA other upstream 2980488 44474159 ~ 44477666 (-)
snrnp200 snrnp200,LOC107686403,LOC107602857,LOC107667532,LOC107600001,LOC108265067 other upstream 3092635 44586306 ~ 44622074 (-)

Expression


Co-expression Network