il17rb


Basic Information

Item Value
gene id il17rb
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 47880396 ~ 47893955 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670807.1
AGTGTTAATACCCGTTCACTGCTGAAGCATGGAGCTATTACAGAGCACCAGGACCCTGCTGCTACTCTCACTCATCCTCCATCAAACATCTGCTCACAATATAGTAGCGACGTGTGCCAAGACCAATGACTTGATGCCTAAAGAATCATGGATAGAAGTTCAGTCCAACCCTTCTCCACTACATGATCTTGACCTTCAACTCATTGGTCAGAGTAGGCCTTTAGACCCTCTTTCCCTGAAAATAAACTGGTCTATCAATATTGACGgtaGTATACACAGTATTACTGGCACATGGATAGAAGTCAGTATACGTTCCCATACATCAtcaagtacagtgaagtacaggtGTGACTACCAACCAGCATTCACTTCAAATCAGTGCAACTACACAGGTTTGGAAGAGcttAGGTTCAGTTTTACTAGCACAGATGTCCATATTGAACCAGAGGGAGTCTACAAAGCCGTTGTCAACAATTTACCTGCAGGTCCCTCAAACACACAATCAAAAAGCAAAGAAGTTGCAGCACCTGgaTGTGAAAATAAACAGATGAGCACTCATTCGATATGCTCAGAAGAAAAACCATTGAAAATCATAGCAGTGCATAAGGGGGATGAAATAGAGGTCACCTTCGAATCTCAGGCTGGTTCTCTGGAGTATGAAATCCTGCTGATCAGAGAAGATGAAAAATTAAACCACACCATAGAGAAAACAAGTGGAAAGATCAGAACTATCATCAAGAAATTTCCCTATCCTGGACCCTGTGAAAACCTTACAGTATTGATAAAACcacatctaaaaaaatgtgGCCGTGTTTGTTCTTGGGAGGAACGTGATGTAAAATGCTacgaAAAAACAGAATTACCGCCTATAGAAGATGAAAATCCATTTGCGCTGATTTGTACAGGATGTGCAGTAGCTCTCATTTTGATGCTTATCTGTTTATGCGCACTCTTTGGACTGAGGAAGCTCTTATCTAAACGTGGGCTGAACCCAGTCTTCACTGGACCGGTCAGGGTGCTCATGGTGTATCCTGCAGTGGACAGTGTCTTCCAGCATGCTGTAATGACCCTGGCTGACTTCCTGCAGAGTCATAAAGATCTGAACGTGGTCATCGACATGTGGCAACGGGGCAGTCTGGCGGAGCAGGGTCCACTTCGCTGGCTTCACTCACAGGCAGATCAGGCCGACAAGGTCCTCATCATCCTACAATCACCTCAACATCAACAGATTCACACCAGCATCCACATCCACACAGATCACCAAAAACCACATATGGTGCCTGGCATGCCGGATTACACCGTCCCAGCTTCAGCCCAAGAACTTTACTTTTTGGCCCTGAACCTGGTTGCCAGTAGTGCCCATGAACCAAAACACCACCACAAGTTCTGGGTGGTGCATAACCAGGGTGGAGAGAGGAGCACGGTGCCAGTGCAGCTCAGAGGCTGTAAAACCCTCCGTCTGCCGAGAGATCTGAACACACTCCACGAGAAACTGTCTTCCAGACAAGGCCAGAAGTGTCGGAGCTGCAGGATCTGGTCGATACGCTGCATCCTGAACTCTAAGAAGGTGAGGCATGCACTGCTGCAGCTGGACAGGAGCCAAATAAACCACTCTGAGAGTGAGAATGCTCATCTCACTGGTGGAGTGCAGGTCTCGAGTAAATGTCTGATTCCCTGACATGATGATGCATATGCATAATATAATCCAATGATATGGATCATTCACTGAAACGAGTTTCCCATCCCCATATTTGACATTGATCACTTAGTATATTTACTGAGACTGATTACTGGAATGTTTGTTAGTTGTTTATGagagtgctgtgcgatatgaccaTAATCGTGGGGACAATGGAAAAGTTTCCATCAAGCTACTTCCATTGtctctatcgtttctacagtaatttcatcaattattcatgcaaatatataaagtaggctacaataaaatgtattggcg

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670807.1 True 1960 mRNA 0.45 13 47880396 47893955

Neighbor

gene id symbol gene type direction distance location
cacna1d cacna1d coding upstream 23864 47711376 ~ 47856532 (+)
LOC103044878 NA coding upstream 208099 47664880 ~ 47672297 (+)
cfap74 NA coding upstream 287069 47497614 ~ 47593327 (+)
LOC103040284 LOC108412055,LOC108265574,LOC105899021 coding upstream 682146 47196661 ~ 47198250 (+)
LOC103046011 LOC108412059 coding upstream 856372 46988976 ~ 47024024 (+)
LOC103038409 LOC103038409,LOC108411948,LOC107724878,LOC107667523,LOC107689282,LOC107711839,LOC107602832,LOC107600045 coding downstream 34000 47927955 ~ 47933611 (+)
cacna2d3 cacna2d3 coding downstream 104138 47998093 ~ 48418212 (+)
cep350 NA coding downstream 1309313 49203268 ~ 49268872 (+)
LOC103029228 NA coding downstream 1379039 49272994 ~ 49308775 (+)
LOC103028608 xpr1a,xpr1,LOC107755298,LOC107758009,LOC107699288,LOC107665065,LOC107603171 coding downstream 1576477 49470432 ~ 49539741 (+)
G59555 gbrd,gabrd,LOC106566882 non-coding upstream 368974 47467704 ~ 47511422 (+)
G59550 gabrd non-coding upstream 419231 47457187 ~ 47461165 (+)
G59546 NA non-coding upstream 443443 47436570 ~ 47436953 (+)
G59544 NA non-coding upstream 445009 47431597 ~ 47435387 (+)
G59597 selenok,selk,LOC107750820,LOC107693600,LOC107594974 non-coding downstream 18561 47912516 ~ 47919334 (+)
G59603 NA non-coding downstream 26353 47920308 ~ 47921047 (+)
G59731 NA non-coding downstream 529334 48423289 ~ 48423506 (+)
G59732 NA non-coding downstream 536967 48430922 ~ 48431231 (+)
G59733 NA non-coding downstream 540018 48433973 ~ 48434203 (+)
gnb1 gnb1,gnb1a,LOC103044197,LOC104956353,LOC107666091,LOC107595416,LOC107385217 other upstream 219039 47623554 ~ 47661357 (+)
G59257 cdk11a,LOC108265382 other upstream 998505 46852364 ~ 46881891 (+)
G58971 NA other upstream 2090242 45789711 ~ 45790154 (+)
LOC103029434 dgcr6,LOC103029434,LOC108430318,LOC107572069,LOC107721026,LOC108265986,LOC105899531 other upstream 3013558 44852780 ~ 44866838 (+)
G58696 snrnp200,LOC106579886,LOC106585548 other upstream 3279436 44595233 ~ 44600960 (+)
G59782 NA other downstream 976212 48870167 ~ 48879623 (+)
G59806 NA other downstream 1104205 48998160 ~ 48998471 (+)
lhx4 lhx4,LOC108412864,LOC107665078,LOC107755297,LOC107599001,LOC107699337,LOC107550233,LOC107758007 other downstream 1428323 49322278 ~ 49370251 (+)
G59961 NA other downstream 1529561 49423516 ~ 49437613 (+)
LOC103025235 LOC103025235,LOC108413084,LOC108265140,LOC107598993,LOC107665077,LOC107755310,LOC107603028 other downstream 1973663 49867618 ~ 49990417 (+)

Expression


Co-expression Network