LOC103041750


Basic Information

Item Value
gene id LOC103041750
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 30176593 ~ 30202206 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670912.1
CATGGTGTCTGTCACGTCCCAGGCAGTGGGGGGAACTACAGAGACCCTGTGTGCTCATGTCTACCCCGAGAGAAAGCTAGTGTCAGTAGAGGTGAAACTGCACACAGACGAGACCAGCTGGGATCTCCTGAAGCGGAGAGTCGCAGTTCAGGAGTTCTATGAGTGTGTGTCCTTCAAGGTTCCAGATGTGAACATAGAGACAGAGGCTTCTGTGGACATTCAGGTCAGTGGAAAGGCAATATTTCTGAACAAGACCACAAAAATCCTCATAACACCTCCAGTTCGCCTGACCATCATTCAAACAGATAAACCAATCTACAAACCTGGACAAACAGTGAAAATCCGTATAGCCTCTCTGACATCCAGCTTTCAAACCTACGATCAGCAGTTTCCAACAATAGAGATCCAGGACCCTAATTCCAACCGTATTGGTCAATGGTTAAATCAGTCCACGTTCAGTGGTATCTTGGACCTGTCATATCCCTTGAACTCAGAGGCTCAACATGGATTCTACATTATCACTGTCTGGAACGAGAGAAATGAACAAATCACACAAGACTTTGAAATCAATGAATATGTGCTGCCAACGTTTGAGGTGATCGTCCAACTTCCTCCAGTCATAACCATTTTGGACACGGAGGCCACTCTGAAAGTCTGTGGAAATTACACCTATGGGAAGCCAGTGAATGGGTCTGTGATAGCAGTCGTGTGCCGTAAACATTATGTGTGGTGGTGGTTTGGGTATGACAGCAAATCGAATTTAGACATCTGCAAAACGTATTCCATGACGACTGATAAGGCGGGCTGCGGATCTGCCGTTTTAAATCTGGAAGAGTATGCACTGACTGCAACAGAGTATGAAGACGTTATTAACGTGGAAGCTCAACTGGAGGAAGCTGGCACTGGGGTGGTACTGAATGGGACTGGAAGCACAACTATCACAATTAATATGCTCAACATTAACTTTGAGGAGACACCGGCTTCCTTTAGGCTTGGCATGCCCTTCAATGGAAAGATTAAAGTCACTGGACCAAACTCTGTTCCTGCAAAAGATGAACACGTGTATCTAATAGTGAGGTATGATGACGATAAAAATGTGACATGGACACTGGTCACAGATGCAAATGGTACCGCCCCCTTCTCTTTAAACACAGCTTTATGGGGATCAAAGTCAGTTTCTTTGGAGGCTAAAAGCGATAAGTCAGTGGAGCAGTATGGGTATATGAGTGTACGCAAACCAACATACTTCAGTGCTTACCTCTGGGTCCAGCCCTTCTACTCCGAAAGCAATTGTTTCCTGGAGCTGCAGCCCTCTCCCAGGCCGTTCTACTGTAATAAACCTGCTGTGGTGAACGCTCGGTACATCAtaaacagcaatgttttaaCCCAGTGCCAGAAGTCGATGACTTTCTTCTATATGGTGATGTCCAAAGGCAGTATGGTTCAGTACGGACAGCTTTCAGCACCCATGAGAAAGGAAACAGTAAACAAAGGAACACTGACGATTCAGCTGGAGCACGTGAAAAACATGGCTCCGTTTGCTCAGGTGGTCGTGTACACTATCCTTCCTAATGGGGAGGCCGTGGCAGACAGCAGAGACTTTGCCGTTGATCTGTGCTTAACCAACCAGGTGTCTTTGATATTCCCTTCTCCTACGGAGCTCCCAGGAGGCCAGACTTCCTTGATTCTGAAAGCTCAGCCTGGGTCTCTTTGCTCTGTGAAGGCCATTGATCGAAGTTTGCTACTGCTGAAACCAGAGAAAGAGCTGGACATTGACTATGTCTTCAACTTGCTGCCTGTTCAGAAGTTATCAGGATACCCATACAACATTTACGATGAGGAACCAAATCCTTGCATTTCAAGACCCCCTATAAGAACCTATAATAGGATAGTGCCTCAACCCCTTCCAGAAGTAAGACCTGCACCAGTGGCTGCTGCACTGAGTCCAAGACTTAGAAcctctttctttccttattactccagcagcactgatgTGTTCAGCGTCTTTAAAAATATTGGGATCAAGATCTTAACCAATGCTGAAGTGAGGAAGCCTGTTGACTGCAGTGGACctatatttctggcccgcccaGCTGTAGCCGCTATGGATGCACCTTTGGAGTTCGGTGCTCCCATGCTTCTGGCCAAAGAAGCAGATGTGGCAGCTCCTGACGTGGCAGTTCAATCAGATCAAACGATTCGTACATACTTCCCAGAGACCTGGATCTGGGATCTTGTTCCAGTTGGGAAATCGGGAATCATGGGGGTGAAGAAAACTGTTCCAGATACCATCACCACGTGGTCAGCCAGAGCATTTTGTATGTCTGCAGTAGGATTTGGAATTGCACCGAAGGCCGAGCTCACTACCTTCCAGCCATTCTTTGTTAGCCTGACCCTGCCTTACTCTATCATCCGGGGGGAGGTGCTCCCACTTAAGGCCACCGTCTTCAACTACCTCAGCGGCTGCATTATGGTGAAGGTGACGCTGGCCCACTCAGAGCAGTTTACAGCACAGCAGTGTGAGAGATGCATTTACACACGCTGTCTATGTGCTGATGAGAGCTGGACCTTCAAATGGACAGTTCAGGCTTCTGCTCTAGGGACGTTGAGCTTTAATGTGAGTGCAGAAGCCCTGCAGACGAATGTGCTGTGTGGGAGTAGGTCGGTCACTGTGCCAGAGAAAGGACGCATGGACACTGTGGTGCAGACGCTGTTAGTGAAGGCAGAGGGAACTAAGCAGACCAACACTTACAACGAGCTGCTCTGCATGACAGGTGCCGCTGTTGAGAAGACCATCTCACTGCAGCTGCCCACTGAGTATGTGCAGGGTTCTGATACAGCATCAGTCTCAGTACTGGGAGATCTGATGGGCCGTGCGCTGAAGAACCTCCAGAGTCTGCTGGCCATGCCGTACGGCTGTGGAGAACAGAACATGCTGCTCTTCGCTCCCAACATCTTTATCCTTCTGTACCTGGAGAGCAGTGGTCAGCTCACACCTGAGATCAGAAGCAAAGCCACCACTTTCCTAGTGAGCGGCTACCAGAGAGAGCTGACCTACAAGCATGATGATGGATCTTACAGTGCTTTTGGAATGTCTGACCCATCAGGCAACACCTGGCTGACTGCGTTTGTGATGAAGTCTTTCAGTAGCgcaatgaaatacatttttgtagaTCAGCAGTACGTGGACAAGGCCAAGGACTGGCTGGGGCTGCAGCAGCAGGAAAACGGCTGCTTCGCCTCAGTGGGTCAGCTCTTCCACAGCGACATGAAGGGAGGCGTTTCTGATGAGCTGACTCTTACAGCATATATAACGGCTGCAATGTTGGAATTAGGCACTCCAGTTTCTGATCCTGTGGTGGAGAAGAGTCTCACATGCCTGAAAAGCAACTTTACTCAGCTCAACTCCACCTACAGCATTGCACTACTCTCCTACGCCTTCACTCTGGCTGAAGACCATCAAATGAGGCTTGAGAGCCTCAATATCTTGGACGAACAGGCCATAGTGACAGCCGGTGGGCGACACTGGAGTAGACTGAATGATGGGAAGACGCTGGACTCTCTGGAGGTGGAGATGACATCGTATGTACTTCTGGCTATACTCTCTGGACCCCAGCTGCAGGGGTTTGACCTGGGCTACTGTGCTAGCATCGTCCGCTGGCTGGCCCAGCAGCAGAATGCTTTTGGAGGCTTTGCATCTACACAGGACACTGTAGTAGCTCTTCAAGCTCTGGCAAAGTACAGCGCCGTCACCTATAGCCCTGCGGGCACCACTGTAGTCACTGTGACCGGACCCTCTGGCAATACGTTAACCACCTTTACAGTCAACCAAAGCAACAGGCTGCTGGTGCAGGAGTCCAGCCTGCAGCAGACATCTGGAAACTACAGTATCAGGGCAGAAGGAaatggctgtgtgttggtgCAGttcacTTTGAACTACAACATCCCTCCTCCAGCTAACTACTTGTCCTTTAATATCTTCGCCAATATATCTGCAAAATGCAGCGATCTGATCCCATCTGCGGAACTGTCTGTAACTGTCCGGTACAATGGGAATAGGGTAGAGACCAACATGGTGATCATTGAAGTCAGACTGCTGTCTGGGTTCAGGCTGGATGAGAAGTCCCTGTTCTTGTCTAATGATACTTCAGCGCTGAATGAAGGTGCTATCAAACGGGTGGATCAGAAGCAGGACACTGTCTTCATCTACCTGGATGGActGACTAGAGGGGAGTTTAAGACATACCATCTGGTCATCCTGCAGCAAACAGTCGTGCAGAAACTGAAACCAGCTGTCATAAAGGTGTATGACTACTACCAGACCAgtgacGTGGCGGTTGCTGATTACACCTGGCCTTGTAACTGACTATACAGCTAAAACACAGCTGCTTCTGAGAGTCAAGAATAAGAGCAGATGTTGCTCTTCTACTAAAGTGTGttctgaaatctgaaatctaaaataaataaatcaa

Function

GO: NA

KEGG:

id description
K03910 A2M; alpha-2-macroglobulin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670912.1 True 4472 mRNA 0.49 35 30176593 30202206

Neighbor

gene id symbol gene type direction distance location
LOC103042059 NA coding upstream 18697 30152436 ~ 30157896 (+)
LOC103042579 NA coding upstream 25522 30146964 ~ 30151071 (+)
ccdc157 NA coding upstream 36068 30138807 ~ 30140525 (+)
LOC103043923 NA coding upstream 55476 30100757 ~ 30121117 (+)
elmod3 elmod3,LOC107702863,LOC107756833,LOC107722433,LOC107571955 coding upstream 87328 30072719 ~ 30089265 (+)
LOC103040008 NA coding downstream 51344 30253550 ~ 30273121 (+)
LOC103040742 NA coding downstream 138373 30340579 ~ 30349621 (+)
LOC103026908 NA coding downstream 412110 30614316 ~ 30625382 (+)
LOC103026612 LOC108442518 coding downstream 457520 30659726 ~ 30749916 (+)
slc15a4 slc15a4,LOC107659270 coding downstream 645701 30847907 ~ 30939711 (+)
G55449 sf3a1,LOC107550953,LOC107702803,LOC107575440,LOC107564451 non-coding upstream 41856 30133115 ~ 30134737 (+)
G55429 NA non-coding upstream 230870 29945437 ~ 29945723 (+)
G55428 NA non-coding upstream 231437 29944930 ~ 29945156 (+)
G55416 NA non-coding upstream 275213 29896560 ~ 29901380 (+)
G55411 NA non-coding upstream 332272 29843419 ~ 29844321 (+)
G55499 NA non-coding downstream 114194 30316400 ~ 30321692 (+)
G55507 NA non-coding downstream 224365 30426571 ~ 30430122 (+)
G55525 NA non-coding downstream 280705 30482911 ~ 30494675 (+)
G55533 NA non-coding downstream 327659 30529865 ~ 30530274 (+)
G55537 NA non-coding downstream 396406 30598612 ~ 30601438 (+)
G55218 NA other upstream 1421776 28754030 ~ 28754817 (+)
asphd2 asphd2,LOC107687974,LOC107703165 other upstream 1519775 28646064 ~ 28656818 (+)
ipo11 ipo11 other upstream 2238204 27814215 ~ 27938389 (+)
G54841 NA other upstream 2464015 27703772 ~ 27712578 (+)
LOC107197454 NA other upstream 2507931 27663782 ~ 27668662 (+)
G55502 NA other downstream 144810 30347016 ~ 30625046 (+)
G55532 cgnl1 other downstream 326656 30528862 ~ 30550061 (+)
G55831 LOC107691557,LOC108411168 other downstream 1718614 31920820 ~ 31924095 (+)
G55844 adam9,LOC107591921,LOC107702867,LOC107722987 other downstream 1772475 31974681 ~ 31977419 (+)
LOC103024127 kcnip3a,LOC108440810,LOC107753121,LOC107687962,LOC107684506,LOC107566017,LOC108264878,LOC101482209,LOC107553838 other downstream 1857203 32059409 ~ 32150570 (+)

Expression


Co-expression Network