adgrd1


Basic Information

Item Value
gene id adgrd1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 32828168 ~ 32915531 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670919.1
CACAGCGCGCTTACACTCAGCGCAGCACGAGGCAGTTGTCAGTTATCGATAGCGCTCCTCACAGCGAGCTGGCGGAATTTCTCACtgtttttttggacaaaaaGGATTAAAACTTTGTGGGGAAAAAGTTGAAAACGATAATTTAAGGATGTATAAGATTTGTTCGGGCGGTAGAGTTATGATTTAGAGCTGTTTTTAAGAAcatgtaataattttttttgtttttctgaagaAAAAACACCATTAGCTTTAAAAGTTAGCTTAAATACAAATGACTCGCGCGAGCTCGAGACTCGTTGCATAGCAGCAAACCGTCCATTTAAACATCTTTCACTTTTTCTCAGTAAATTCAgcataaaactgcattttttttatcatcatggACTTTTTGTTCCGAGTTTTAAACTTGTCTGCTGTTGTGAACATCCTTCAGgaGTTTGCTGTTTTATATTCACAGGTTATTGGTGACAGTGTTGTGCCGTCCAAGCATCCAGGCCTGGATGTGCTGGCTACTGCCTCACACTACTGGCCACTGGATGCGGTGGATGGACTGCGCAGCCTGCGGGATCAAATTGGGAATAGAACAGGTCATGTTAATGGAACTAATATAACACTAAGAATCCACAACCACACTGTCCTGCCTTACCATAACTCTTCCTCTGTGTACACCAATGACTCTGCCTACACTAACATTTCCGTCTCTGTAGATATCGTAGAGGGAGTGATGAATAAAGGCATTTATCTGAATGGAGACAGAGGAGCCACTTTTCTCCACTTTGGCAACTACAAAAACTCCTGCATCAGCGACCCCACGCTGTGCGGACCGCAGGGTGTGACATTCTCGTTCTTCTGGAAGAATCAGGAGACGCAGTCACGTTTTGCATTCGCATCAGGAGGAAAGATCATATCTAATGGCTTCTCTGTGTTCACTAACCCGATGGGAGGATACGTAGAGATCTATACAAGAGGAAACTCCAGACGCTGGAAAGCTAAAATTAAGCCACCAGGTCCTTTCTGGACTCACATTCTGTTCACATGGACCATGAAGGATGGCTTGAAGGTCTACATAAATGGCACCTTCAACAGCAGTGATGAGGTGGGAAGTGTGTCGGAAAACAACTACGACGACACCTACACTGACCTGGTGATTGGAACCGGAAATGTGCCGACATATGGACACATTGTAACTGGAGCCTTTGATGAGTTTGTCATTTGGGAGAGAGCTCTTTCGCCCAGGGAGATCTGTCTCTACTACAAAGCAGCTAGagCTGATGACACAGTTTTTCCACCAACTACTGAAACTCCATCCTACGTCCGCACTACAACTGATAGTATTGGTCTGCAGgCAGTCACTTCACCTCATCATGCAGTGCTTTCTAACCTGAGTGAGGATGTGCCTGGCGCTGAGGCGGCAGCGTCCATGCCTGTTATGGCTCTCCTCCAGTCTCTGCCCTTTAGCCTGCCCAACAAGACCATTCCTCAGGACTCAGCTCACAATCTCACACAGttacaggCAGTCACTTCACCTCATCATGCAGTGCTTTCTAACCTGAGTGAGGATGTGCCTGGCGCTGAGGCGGCAGCGTCCATGCCTGTTATGGCTCTCCTCCAGTCTCTGCCCTTTAGCCTGCCCAACAAGACCATTCCTCAGGACTCAGCTCACAATCTCACACAGTCATTGTTGAAGAGTGTAGATGAGGTGATGTCCTCCAGTAACTGGAAGGAAGATGAGCAGTGGACTCCTGTGGTCAGTGGACTTATAGACACTGTGGATAAAGTCATGGTGCACATGGTGTCCAAACTCCAGTCTAAATCAGACATGCCTGTCACAATTGGTGGAAAGAGTTATGTAGCAGATTACTCTCTGATGAAGATCCCTCAAAACTACAACCTGTCCAGCTACCGGTTTCCTATGCAGGGCAAGAACTACATCTCAGTACCAGGAGAGGCTTTTGCCATGCAGAcCCAGACCACCATTGTGGGCCTCTTCTACCATAATATGCACAACTACTACAAACAGATCAACCCCCTGCGAACCAGgATCAACGAGGCTGCGGACTATAAAGACTATAAGATCCAGGTGGCCAGTTACCTGATCTCTCTAAAGGTGGAGCCCTTGCCTGCCCTGTCCTTCAACCTGTCCACAGAGCCGCTCATCAGGATTGTGCTAACACACCAGCTGAGCAAAGAGCAGCAGCTTCAGGCTTCCAATCAAAGCAACAAAGTCTTCCTCTACTGTGGCTTCCTGGACTACAGctcTAAGGAAGGTGTATGGTCCAATGAGGGGTGCATGAGAACTGGAGGCAATCTTTCGTACTCCATCTGTGTGTGTAACCACCTGACCAACTTCGCCATCCTCATGCAGGTCGTTCCTGTGGAGCTCGCTAAAAGCCATCAGATAGCGCTCTCCACTATTACCTATGTGGGTTGCTCCATCTCCATCTTCTGCCTAGCCATCACCCTGGTCACCTTTGCCGTGCTCTCgTCCGTGAGCACTATCCGAAATCAGCGCTACCATATCCATGCTAACCTTTCCTTCGCCATCCTGGTGGCCCAGATCCTCCTACTCATCAGCTTCCGCTTTGAGCCCGGCACGATGCCCTGTAAGGTGATGGCGGTGCTGCTGCACTTCTTCTTCCTGTGTGCGTTTGCCTGGATGTTGGTGGAGGGGCTGCACCTCTACAGCATGGTTGTCAAAGTGTTTGGCTCTGAGGGCAGCAAGCACTTCTACTATTATGGCATCGGCTGGGGGTCTCCGCTGGTCATATGCGTGGTGTCCATGACGTCATCTCTGGGAAGTTATGGGGAGGTTGGAAACTGCTGGCTGTCTCTCCAGAATGGAGCAATTTGGGCTTTCGTAGCACCTGCACTGTTTGTCATAATGgtGAACATTGGTATCCTTATTGCTGTTACAAGAATTATCTCCAGAATCAGCGCAGAGAACTATAAAGTGCATGGAGATGCAAATTCTGTCAAACTAACTGCTAAAGCAGTAGCAGTACTCTTGCCTATCCTGGGCATTTCGTGGATCTTCGGGGTTCTGGCTGTGAACGACCACTCCCTGCTCTTCCAGTACATGTTTGCCGCCTTCAATTCTCTACAGGGcttcttcatcttcctcttccaCTGTCTGCTGAACTCTGAGGTGAGAGCAGCTTTCAAGCACAAGACCAAGGTGTGGTCTTTGACCAGCAGCTCCATCCGCAACATCAACGTCAAGCCTTTCAACTCAGACATTATGAATGGCAACAAAGGGGGCGTGAGCCCGACGAAAATGCACACGTGGGACAAAAGCACTAACTCGGCCAATCGCATCGACCTTTCAGCAGTCTAAGCATCACATAGTGGACGACGGACAGCTACTGATCAAAGACCTTAAACGGACAGTGAAAGTCAAACCTCTGCTCAATCACACCGGCTGTTTCAGCCACCGTTCTTTTTCCACAGTGACTCAAAGCTTTTTACGAAGTTCTCACAGGCCTGGGGaaagagcgagcgagcgagggaAAGGAAAGACTGCAGGCTTTCACAGCTGCTAGCAGACTTACGCTCGGCGCTCTGATGTCACTCTCTCCGCCTTTGCTCTGTGAAGATAAACAGAGTTTTAGACAGTAATAAGTTGCAGATGAAAACACAAGACTCATTGTGTTGGATGAATGTGCTCTGTTCAGTGTTATAAACTATAAAACGTTCTTCTTGTAACTCTAGTAACTGCTGGATTCCACTGCTGTCTGTTACTTGACACTAAACTGTGACACAAGATGCTGAGGAAGGACGAGGAGTATCCTGTTTCGCTGCCACACTCTCCTGGGACCTGCTAcactatgtggacaaaagtgttgggacacctgcttattcattgttgattcttctgaaatcaagggtattaaaaatactt

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 133 isoform X1

GO: NA

KEGG:

id description
K08465 ADGRD1, GPR133; adhesion G-protein coupled receptor D1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670919.1 True 3898 mRNA 0.48 27 32828168 32915531

Neighbor

gene id symbol gene type direction distance location
LOC111192669 NA coding downstream 7874 32817117 ~ 32820294 (-)
ep400 ep400 coding downstream 57498 32735413 ~ 32770670 (-)
ncor2 LOC108412761,LOC107742750 coding downstream 196088 32450153 ~ 32632080 (-)
ccdc92 ccdc92,LOC107742742,LOC107687960 coding downstream 547839 32257775 ~ 32280329 (-)
fam160b2 fam160b2 coding downstream 788820 32025660 ~ 32039348 (-)
rimbp2 rimbp2,LOC108414005 coding upstream 7539 32923070 ~ 33133867 (-)
piwil1 piwil1,LOC107723252 coding upstream 264460 33179991 ~ 33188623 (-)
fzd10 fzd10,LOC103024082,LOC108441898,LOC108266036,LOC107669258,LOC107659609,LOC107574912,LOC107723249 coding upstream 340188 33255719 ~ 33258251 (-)
trnaa-agc_13 NA coding upstream 444838 33360369 ~ 33360441 (-)
LOC103024912 hpd,hpdb,LOC108441909,LOC107723232 coding upstream 446290 33361821 ~ 33371671 (-)
G56110 NA non-coding downstream 1296 32824840 ~ 32826872 (-)
G56085 NA non-coding downstream 383529 32444401 ~ 32444639 (-)
G56089 LOC108412767 non-coding downstream 385715 32437543 ~ 32442453 (-)
G55952 NA non-coding downstream 575007 32252943 ~ 32253161 (-)
G55938 NA non-coding downstream 585629 32241421 ~ 32242539 (-)
G56137 NA non-coding upstream 262664 33178195 ~ 33178579 (-)
G56148 NA non-coding upstream 304961 33220492 ~ 33226588 (-)
G56172 NA non-coding upstream 339477 33255008 ~ 33336096 (-)
G56186 NA non-coding upstream 443234 33358765 ~ 33366613 (-)
G56189 NA non-coding upstream 461628 33377159 ~ 33380627 (-)
LOC103021360 LOC108440818,LOC107659619,LOC108265551,LOC107726210,LOC107553829,LOC107684495 other downstream 26008 32772027 ~ 32802160 (-)
LOC103043418 arpc5la,arpc5l,LOC108411248,LOC107571143,LOC108265305,LOC107550963,LOC107753090,LOC107676626 other downstream 1087947 31731464 ~ 31740221 (-)
LOC103027498 LOC108411246,LOC106585447 other downstream 1137360 31635481 ~ 31690808 (-)
LOC103046862 LOC108410878 other downstream 2893738 29896515 ~ 29934430 (-)
kiaa1671 NA other downstream 2987415 29744028 ~ 29840753 (-)
LOC103023237 NA other upstream 233543 33149074 ~ 33177650 (-)
LOC103038119 LOC108412501,LOC107754395,LOC107671045 other upstream 2175199 35090730 ~ 35108420 (-)
acaa2 acaa2,LOC107671002 other upstream 2369891 35285422 ~ 35293421 (-)
c6h22orf39 NA other upstream 2380810 35296341 ~ 35299750 (-)
LOC103038782 slc25a25a,LOC108430373,LOC107754405,LOC107671014,LOC107699669,LOC107560063,LOC107559565,LOC107752985 other upstream 2406454 35321985 ~ 35332434 (-)

Expression


Co-expression Network