LOC103025805 (pepa,LOC108442134,LOC108414658,LOC108265567)


Basic Information

Item Value
gene id LOC103025805
gene name pepa,LOC108442134,LOC108414658,LOC108265567
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 5633087 ~ 5655686 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670974.1
TCACTGAGCCCAACAAGGAACTCACAGTAAAGACAATGAAGCTGATCCTGGCCCTGTGTGCCCTGGTGGCACTTTCAGAATGCTTCAAGGTGCAACTGATCAAGGGCAAGTCTGCTCGTGAGAGGCTGAGGGAGAAAGGACTGTGGGAGAAGTACAGGTTGATGCACCCCTACAACCCCCTCGTCAAGTTCTCTGGGAATGGTGGTACTGAGTCCATGACCAACGATGCTGATCTCTCCTACTACGGCGTGATCTCCATTGGAACCCCTGGTCAGTCCTTCCAGGTCATTTTCGACAGTGGCTCCTCCAACCTCTGGGTGCCCTCCACCTACTGCTCCAGCCAGGCCTGCGagAACCACAACAGGTTCAACCCCTCAGCTTCCAGCACTTTCCAGAGCACCAGCCAGGCTCTCTCTATTCAGTACGGCACCGGCAGCATGACTGGATACCTGGGATACGACACTGTTTCGgTCGGTGGAATCAACGTGCAGAACCAGATCTTCGGGCTGAGCGAGACTGAGGCTCCCTTCATGGCCAACATGGTGGCTGACGGCATCCTGGGTCTGGCCTACCAGTCCATTGCCTCTGATGACGCCACTCCCGTCTTTGACAACATGATGAGCCAGGGCCTGGTCTCCCAGGATGTGTTCTCAGTCTACCTGAGCAGAGGTGGCTCAGAGGGCAGTGTGGTGCAGTTCGGTGAGATCGACAGCTCCTACTACACCGGCAGCATCTACTGGATCCCTCTGTCCTCCGAGACTTACTACCAGATCACCATGGACAGTGTTACCATCAACGGACAGACCGTTGCTTGCTCTGGTGGATGTCAGGCTATCATTGATACTGGAACTTCCCTCATTGTTGGGCCAACCAGTGACATCAACAACATGAACTCCTGGGTGGGCGCCACCACTGACCAGTATGGAGATGCCACTGTGAGCTGCAGCAACGTCGCCAGCATGCCTTCAGTCACCTTCACCCTCAACGGCTACACCTTCACCGTCCCCGCCTCCTCCTACGTCAGCCAGGACTCTTACGGCTGCAGGACAGGCTTCAGTGGCAGCGGAGACTCTCTCTGGATCCTGGGTGATGTGTTCATCAGGAACTACTACACCATCTTCAACAGGCAGAGCAACAGCGTGGGTCTGGCTGCTCTCGCTACATTTCAAGCTCACCTTCAGGGCAGTAGCTCTACTCCCACCACAGCATCTTCAAACTCCTCTTGGGTCTCAGCTAGTCGGCTGAAGCTCCGCCCGGTcgtGGTGCCTCTGATCAAGGCCAAATCTGCACGCCGGAGGCTGCAGGAGAAAGGCCTGTGGGAGACCTACAGGAAGCATCACCCCTACACCCCCTGGACCAAGTTTGTGAGCTCTGGTATGGAGTCAATGACCAACGATGCTGATCTCACCTACTATGGCGTGATCTCCATTGGTACTCCTGGTCAGTCCTTCACCGTGCTCATGGACTCTGGATCCTCCAACCTCTGGGTGCCCTCCACCTACTGCTCCAGCCAGGCCTGCCAGAACCATGACATGTTCAACCCATCACAGTCCAGCACTTTTGAGAGCACCAATGAGTCTCTGTCCATTGCTTACGGCACTGGAAGCATGACCGGATTCCTGGGATACGACACTGTGACGGTCGCTGGACTGTCCGTGCAGAACCAGATCTTCGGCTTGAGCGAGACTGAGGCTCCCTTCATGGCTAGCATGACTCCTGATGGTATCATGGGTCTGGCCTACGAGGCCATCTCCTCTGACAGCGCCACCCCTGTCTTTACCAACATGGTGAGCCAGGGCCTGGTCTCCCAGAACCTCTTCTCAGTCTACCTGAGCAGCGATGACGAGCAGGGCAGCATGCTGTTCCTGGGTGAGGCTGACAGCTCCTACTACACCGGCAGCATCTACTGGATCCCTCTGACCTCTGAGAGCTACTACCAAGTCACCCTGGACAGTGTCACCGTGAACGGAGAGGTGGTTGGCTGCTCTGGTGGTTGCCAGGCTATCATTGATACCGGCACTTCCCTCATTGTTGGACCCAGCACTGCCATCAGCAACCTGAACGCTTACCTGGGAGCTCAGCAAGACCAGTACGGAGATTACGTTGTGAGCTGCAGCGACATCTCCAGCATCCCCTCAGTGACCTTCACCCTCAACGGCTACGCCTTCGCCATCCCCGCCTCCTCCTTCGTCACTCAGGGCTACAGCAGCTGCACAACTGGATTCTCCGGCGGCGACTTCGGAAGCAGCTTCTCCTGGATCCTTGGTGACGTCTTCATCAGGAACTGGTACACCATCTTTAACAAGGGCGACAGCACCGTGGGTCTGGCTCAGCTCTCTTAAGCACAAACAGCAACTTAAACATCAGCCTCACTGC

Function

symbol description
pepa leucyl aminopeptidase; glutamyl aminopeptidase

NR:

description
PREDICTED: pepsin A-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004190 aspartic-type endopeptidase activity molecular_function

KEGG:

id description
K06002 PGA; pepsin A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670974.1 True 2376 mRNA 0.56 18 5633087 5655686

Neighbor

gene id symbol gene type direction distance location
rbm15 rbm15,LOC107731203,LOC107680058 coding upstream 104023 5523809 ~ 5529064 (+)
alx3 alx3 coding upstream 119416 5496669 ~ 5513671 (+)
kcnc4 kcnc4 coding upstream 314639 5274656 ~ 5318448 (+)
LOC103043955 si:ch211-199o1.2,LOC108442126,LOC107668030 coding upstream 362082 5266678 ~ 5271005 (+)
ahcyl1 ahcyl1,LOC107679038,LOC107591817,LOC107668032,LOC107731197 coding upstream 374472 5213404 ~ 5258615 (+)
LOC111192754 NA coding downstream 114330 5770016 ~ 5781687 (+)
LOC103022582 adora1b,LOC103022582,LOC108414989,LOC107711940,LOC107680252,LOC107591868,LOC107550463,LOC105912002 coding downstream 235965 5891651 ~ 5912340 (+)
dclre1b NA coding downstream 263488 5919174 ~ 5927170 (+)
lhfpl5 lhfpl5,lhfpl5b,LOC107591869,LOC107745833 coding downstream 590543 6246229 ~ 6250603 (+)
LOC103046376 LOC103046376 coding downstream 694456 6350142 ~ 6354308 (+)
G49868 NA non-coding upstream 26487 5606003 ~ 5606600 (+)
LOC111192752 NA non-coding upstream 94174 5529806 ~ 5538913 (+)
G49855 NA non-coding upstream 117228 5515561 ~ 5515859 (+)
G49838 NA non-coding upstream 190402 5442409 ~ 5442685 (+)
G49837 NA non-coding upstream 201450 5431429 ~ 5431637 (+)
G49901 NA non-coding downstream 10253 5665939 ~ 5666658 (+)
G49915 NA non-coding downstream 50013 5705699 ~ 5718260 (+)
G49941 NA non-coding downstream 163277 5818963 ~ 5819283 (+)
G49942 NA non-coding downstream 168929 5824615 ~ 5825171 (+)
G49980 NA non-coding downstream 271719 5927405 ~ 5930023 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 5635 5619159 ~ 5627452 (+)
G49475 NA other upstream 1386860 4244528 ~ 4246227 (+)
spata6 dnttip2,LOC107700367,LOC107603264,LOC107757995,LOC102796155 other upstream 1393214 4199939 ~ 4239873 (+)
faf1 faf1,LOC107743872 other upstream 2481037 2982846 ~ 3152050 (+)
G48714 NA other upstream 4821822 808155 ~ 811265 (+)
LOC103023397 NA other downstream 121366 5777052 ~ 5789265 (+)
G50063 NA other downstream 715834 6371520 ~ 6376705 (+)
LOC103039117 nol4la,LOC103039117,LOC108412512,LOC108265968,LOC107680239,LOC107550513,LOC107731219,LOC107745834,LOC107549982 other downstream 1207670 6863356 ~ 6941978 (+)
trnae-cuc NA other downstream 1328504 6984190 ~ 6984261 (+)
c6h9orf3 NA other downstream 2074998 7730684 ~ 7884058 (+)

Expression


Co-expression Network