ajap1 (ajap1)


Basic Information

Item Value
gene id ajap1
gene name ajap1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 354036 ~ 477296 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670982.1
gcacTGCGCACTCACTGTTCGCGCGCGCttgaagaagaaggagaagaagaaggagaagaagtgGTGGCGCTCTGATCTCGCCGCTTATATGTCGCGCGCCCCTCTCACCTTTGCCTCGCACGCGCCCCACGACCACGACCGCGACTACGAAGACGAGGAAGAGGACGACGACGACCAGCGGGAGGATTAGCATAGAGGAGATAATGTAGAGGGAGCGCGCGCTCGCTCGTGAGTGCGCGGGACGCCTTCATCTCGCGGCTCGTCTCGAGACCATGTTCCTCCCCTCGCTACTCATCTTCGTCTCGAGCGGAGCGCGCGGCGAGGTCTCGTGAACTTTCCGGAGGAAGGAGtgtgttctgtgtttctttttttcagctttttttctcttttatgtttctctttttctctcttttttttttaaatcttttgatCTTTTACAAGCCTGCGTTACCGGCACGCGCACTCCTGATCTTTTGCACGCGTTACCTGGAACGAGGTAACGGTAACTAAAAGaggaaaacaggaaaacaggagggttaaaaaggGGTAACTGTGTGGCTGCGCGCGTGGGTGCGCACGTGGGTACCCGGAGGTCTCGCGGACGCGCGAGCGTGGAATGTTCGCGTCCGGACCGTGTGGAGTACCCGCGCTGAGCTGAAGGGCTGGGAGAGAGGAGCGCGCGAGCGAGCGAGCGTCGACATTTGGGGAGTGCAACGTCGTCAATGGGAGGAGGAGGACTGATCTGGAATCGATATCGATCATTATGTGGATAAAACGGTGTATAGCGCGCAGtTCCATGGCTGCTCTGAAGCCCTCAGGTCTGCTGGGATGCAGAATGTGGATCCTCTTCGCCCTAATCCACCTGACTCTGGACCTGTCGCTGTGTGCTCCGGCGGGTCAAGGCCTGCCACTCAAACTGCTGCCTCGGTCGGCGCCTCGGCTCAGGCCCCGCCCCCTACCCACCAGGGACGCACCTAGCacccagccctggaggactgtGGGCACCTGGCAGCGGGGCGTCCCGCCGCCTCCCGTCCCGTCGCCCGGGTACCGGGGCGGAGCAGGATTAGGGGGGTTGGGGTCCAAACCGCGGGCGCAGAGGCGCAGGCGTCACCTGTGCAAGAGGTGCGGTTCGAAGCCCCGCCCCTCGGAGGGGGAGGAGTCTCTGGAGTTCCTGGAGGGGAGTAAATCCGACATCCTGCGGTACTTGTTGCGTTCACGGCGGCAGCTGGAATGGGACAGCTACGATCAGGAGGGGAGGACCACCACGGTGGCGGGATATATCGAGTGGGGTCCGACGGGGACGGACGAGGGTCTGGAGGACGACGTTAAAGCGGTTCCcaacaccatcaccaccacgaaagcctccaccaccaccaccacaaccacTACTATCTCCACCACCACACGCAGCCCCCAAAGGACTTACGCCGTGGTCACGACTCCACATCCCCAGAGGCTGAGCACCACGCAGCCTACCGTTAACCTCGGGGTCACTGCCAAGCCACAAAAGCCATTCGGGGACACGCCAGGTCTGGCAGTGCATCAGATCATCACTATCACTGTTTCCCTCATCATGGTCATCGCAGCCTTGATAACAACACTAGTCCTTAAAAACTGCTGTGCACAGTCGGGGAATGGCCGCCACACTAGCCACCAGAGGAAGATCAACCAGCAGGAGGAGAGCTGCCAGAACCTGACCGATTTCACGCCGGCACGAGTGCCCAGCAAGGTGGACATCTTCACTGCCTACAACGACAGTTTACAGTGCTCGCACGAGTGTGTGCGCACCGCCGTGCCCGTCTACACCGACGAGATGATCCAGCACACGCCCATTTACAAGACCACGTACAACGGGAACAGACCGTCGCCGACTGAAAGGCAGCTAATCCCCGTGGCCTTTGTGTCTGAGAAATGGTTCGAGATCTCCTGCTGAGGGCCTTTTACTACCTGCGGGTCGCTGCAACTTCCTCAATTTGGACCCCGGAACCCTTATTGGAAAGTCTCAACAAGGACCCACAATACAATACGaacaaaaacctgaaaaaaccCGAACAAGTGAAGCGAAATGAGGACCCAGGAGTGGAATTGAACCGaggcttttttttgtaaatgcggaggaggaggaggaggaggtggaggaggaggacgggtgaagatgtttatttttctaaGCTGATGGCAGGAGGGAGCAGTGCTACGGTCGCCAGTTCAGATTATTTTCCATATAGACTTCTTCTTCTGGTCATTTAGAGATGATACGTATACTTAgagttaatatattatatacatatattaccgTACGTGTGGACGTGTGCTGGGAGGACCGCCGCTGCAGACTACGGGATTACTGgaggatttattattattattattattattgttattattattattattattattgttattatgggCTCGCGGTTTACGGGCTGCTTTTCGGTGACGGGGGGGTGAACAGAACTTCTAAGAACTATGTGCCAATAACGCCAATATGTGCCACTTTATGTACAGACGGATCGCGTGTCTGGGAGTGGATGGGGGAACTTCCACAGACATCACCAGAAGAGTCATTTCTGTGACGGTACTCTATATCCACCCATCCCTTTTTTTGTATAGAAACGTACAAATATGTATTTGAAATATGTTTTGAAATAGTTCAACAACGATGTGTTGCAGACgtccaaaaatatttataaggagcactatttgattagaaaaaaatatataaaaatgaaggACTGAAGAAAACCTCCTCGCCCAGCGTCTCAGATctacagtatatcacagtgttatattgatatttagGCCCAGTTTTAAACTGAATAGTCTTAAACTCTATTTTTCTACAAAGAGAAAAATCACTCTCAGCTCTCACTCTACACCGCACCCAAACTTTCGGGACTGTTAACCCCCATCTGAGATTCTCACCTTCAGCCAGGAGACGCattctcaatatatatatatatatatatatatactgaattttattcctttttttgttattttgttttgttattttttttaagaccaCCAGGGaattcattacttttaaaaattaaaaaaaaaaaagtaattccaATGAATTTTTAGATCCTAAGCCATGCCACATCcagcttatttttgtttttttaattaatgtatttaacattttttattttttatttttttctgttggatATCTAAACTCATCCGGATCAATGATGTGGATGAAGATGAGGAGTTGATTCAACGATTCGGTGAGAAGGAtgtattttgttctgttttgaagACCACAGTCGCATTAAATcgcttttatattattatttttttcctgctcAGTCgcaaattaaaaagttatttattcgCTGGGTGAGAATTGACATCTGTTGGATTACTACACTCATCTGAATCAATGATGTGGATGAAGATGAGGAGTtgattaaatgattcagtgttttAATGATTAAGTGATTCAATCAGGAGgaaacattttcttttgtttattttgttctgttttaaagacCACAATCACgttgatttaaaaatgtatatttattatattattatttcattttatttttctgctcaGTCGCAAATTCAGAAGTTGTCCCAATGAATGTTTAGATCTTAAGCCATGCCACATCTAgcttatttttgattatttaaaatgaattaattaatctatttttgttttattttatgtgtcaCTGGGTGACAATTGACACCTGTTGGATATCTACGCTCATCTGGATCAATGATGTGGATGAAGAGTCGATTCAACAAttcattgattcattgattcaGTCAGAAGgaaacacatttttgttcacattgatttagaaatatatattggtaatactattattttattatattatactctTTTCTGCTCTGTTGCGAATTCAGAAGTCGTCCCAATCaattttttagaattaatttattttcttttatttcaatttatgACACCTGTTGGATATCTACACTCATCTGGATCAATGATGTGGCTGAGGAGTCGATTCAGCGATTCAGTGATTCAATGATTCAGTCAGGAGGAaacacatgtttttttctgttataaaGACCACCATCGGACTGCCACACTCGAGCcgattcagtgattcagttgtttgttttgtttaagttcactattgcactattgatt

Function

symbol description
ajap1 Predicted to enable beta-catenin binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in adherens junction; cell-cell contact zone; and cytoplasmic side of plasma membrane. Predicted to be spanning component of plasma membrane. Orthologous to human AJAP1 (adherens junctions associated protein 1).

NR:

description
PREDICTED: adherens junction-associated protein 1

GO: NA

KEGG:

id description
K21387 AJAP1; adherens junction-associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670982.1 True 4144 mRNA 0.46 6 354036 477296

Neighbor

gene id symbol gene type direction distance location
LOC111192744 NA coding upstream 84514 263730 ~ 269522 (+)
LOC111192720 LOC108425021 coding upstream 222398 122069 ~ 131638 (+)
LOC103041629 sema3b,LOC107717529,LOC107556489,LOC107669651 coding downstream 937978 1415274 ~ 1461698 (+)
pym1 pym1,LOC102777374 coding downstream 1283516 1760812 ~ 1764075 (+)
LOC103027674 LOC108425035 coding downstream 1295623 1772919 ~ 1786362 (+)
LOC103045867 mc3r,LOC103045867,LOC108425022,LOC107751459,LOC107711834,LOC107680356,LOC107669608 coding downstream 1522278 1999574 ~ 2001170 (+)
LOC103028158 cebpb,LOC103028158,LOC107556312,LOC107669676,LOC107751442,LOC108265421 coding downstream 1882626 2359922 ~ 2362224 (+)
G48589 NA non-coding upstream 82694 271035 ~ 271342 (+)
G48583 NA non-coding upstream 136535 216847 ~ 217501 (+)
G48580 NA non-coding upstream 141326 212399 ~ 212710 (+)
G48579 NA non-coding upstream 143749 210054 ~ 210287 (+)
G48558 NA non-coding upstream 202577 150934 ~ 151459 (+)
G48594 NA non-coding downstream 78494 555790 ~ 559237 (+)
G48671 NA non-coding downstream 111258 588554 ~ 588845 (+)
G48673 NA non-coding downstream 111837 589133 ~ 589532 (+)
G48678 NA non-coding downstream 159359 636655 ~ 636858 (+)
G48681 NA non-coding downstream 186029 663325 ~ 663663 (+)
G48714 NA other downstream 330859 808155 ~ 811265 (+)
faf1 faf1,LOC107743872 other downstream 2505550 2982846 ~ 3152050 (+)
spata6 dnttip2,LOC107700367,LOC107603264,LOC107757995,LOC102796155 other downstream 3722643 4199939 ~ 4239873 (+)
G49475 NA other downstream 3767232 4244528 ~ 4246227 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 5141863 5619159 ~ 5627452 (+)

Expression


Co-expression Network