osbpl9 (osbpl9,LOC107657891)


Basic Information

Item Value
gene id osbpl9
gene name osbpl9,LOC107657891
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 2674216 ~ 2692784 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671015.1
TACATAATTACAGCCCATTTGACTACAGCCACGGCTCTGACCAGCCCAGACTGCAGCTGTGTGATTGATGAATCTGACCTGCAGGCTGATTTTACCTCTGATTCAATAATTAAGCAACACTGGATTTCTTGGCCGAATCAGATATCTGATGTTTTTCTCATTGTAGATTCAGACAGACTCTTAATTATATGTTAGAAAATGACCACAAGTAGACAGATAAGTTTCTTAAATACAGGCTTTTTATAAGCTGGATAGTATTTGTATCTTCTTTATTGTTattgaataaaaacacaatataaaatagTGGTAATATCAGAGTGATCCTCTTATCTCCTGAATGTGTTTCTCCTGTAGAGCACCATAAACCCAGTGGATGGAGTTTACCAGCCCTGCCCCCTGGACGCCTCTGTAGTCAGTGCCATTGCCATGCCAACACAGACCACCCTCCCCACAGATGGAGCTCAGGTGTGTAAAATGGATCAGAGGCCTTCTTCTTTACCCGTGGGTCCTGTGGTCACGGTGATGGGCAGCCTTCAGACGCCCACTCCCAACAGCACAGGGAGTGGTCCCTCCGCCCCCAGCAGCAGCGTGACCTCGCCCAGTCACATCAACGTCCCGGCCCACACTGTTCCAGACTTCTCCTACTCCAGCAGCGAGGACGAGTTCTACGACGCCGATGAGTTTTACCAGAGTAACACCTCTCCCAAACACTGCATAGaCCCCTCCAGAACCCCTGCTGCCAACAGTGAGGCGAACACAGCCCTCAAACGGCCCGACACCACCGAATCCATCAACTCCTCCATGTCTAATGGCACAACTGATGCAGATCAGTTCGACAGTCATGATGAGAAGGATGATGACGGCGAGGGAGAGTCGGTGGAGGAGCATAAGAGCGTCATCATGCACCTGCTCTCCCAAGTACGACTGGGAATGGACCTCACCAAGGTGGTTTTACCTACTTTTATCCTGGAGAGGAGGTCGCTGCTGGAAATGTATGCAGACTTCTTTGCACATCCTGATTTGTTTGTCAGCATTGCGGAGCAGCCGGAGCCCCGGGAGCGCATGGTGCAGGTGGTGAGGTGGTATCTCTCAGCCTTTCACGCTGGCCGGAAAGGATCTGTGGCCAAGAAGCCCTACAACCCCATTCTGGGAGAAGTGTTCTTCTGCCACTGGGACATACCCTGTGAAACCGAGGATCCTGCATCAGTGGAGCCTGTATCAGAAGGACCAGTGCCATTATGTAGCAGGGGCAGTGTGTCGTTTGTGGCGGAGCAGGTTTCCCATCACCCCCCGATATCTGCATTCTACGCTGAGTGCATCAGCAAAAAAATCCAGTTCAACGCACACATCTGGACCAAGTCCAAGTTCCTCGGGATGTCCATCGGGGTGCACAATATTGGCCAAGGCTGTGTGTCCTGTCTGGAACATGATGAACACTACATCCTCACTTTCCCCAACGGCTACGGCAGgtCAATCCTGACAGTTCCGTGGGTGGAGCTCGGTGGCGAGTGCAATATTTCTTGTTCGAAGTCCGGCTACAGTGCCAACATAGTGTTCCACACCAAACCCTTCTACGGAGGAAAGAAGCACAGGATAACCGCAGAGATCTTCGGCCCAAACGATAAGAAATCATTCTGCTCTATTGAAGGAGAGTGGAATGGAGTGATGTATGCAAAATGGCTAACTGGGGAAAACTCTGTGTTCATTGACACGAAGAAGCTGGGCATTATTAAGAAGAAGGTGAGGAAGTTGGAGGACCAATTAGATTATGAATCCAGACGTCTGTGGAGAGACGTGACGCTGAACCTGAAGCTGAGGGACATTGATGCAGCTACAGATGCTAAACACCGTCTGGAGGAGAAGCAGAGAGGCGAGgccagagagaggaaagagacgGAGGTTCAGTGGGAGACTAGAttgTTCCACGAGGACGGCGAGTGCTGGGTTTATGACGAgccgctcttaaagagaatggcgTCGCTACGGCACTAATACAGCCTCTCTCTGAAACGCCGGAGTCTGGAAAAACAGAACTCTTTTACAATTCACCTTTCATCTAAAGCCTTGGAATGACTGATGAATGGACATTTACACAGCTTTGCATTTTGgaaatgaatgatgatgatgatgataatgatgatgatgaaaaagcagaaaaaaaaaaaagaaatgaactgtgtacaaataaatatcgaaattacaaattactcctTTATCGCCAACTTCAGCACCACCTCCACGTCTCCACCGCCCTTTCAGCaaggaaaacaagaaacaaacagcaccacagaaaaacacagaaacacagaggtAGTTATTAACGGCCCCTGAGCAACACGGGCAGATGCTCCTGTTCTGGGGATGATCCCAGAGGTGATACGTCTGTCCCTTTTGGGGGGGAGAAAAAGGGGGCGGGGCAGAGGAGTCGTACGCATTGATTGGGTGGAAAAGGGGGTCAAGGTGTTTCATTCGCGTTTCAATCGAACAAACTCTGAAAACGACAGCGTTCTGTATCTCAGGGAATCCGGAGACTGAGGATTGAAGGCTGTATCTATCACTCGACGTTCGAAAGGCCTTAAAGGTGGAAGAACTGCAACATGGGAGAACTTGGCTCGCTTACAGCTAGCtacagatatttatatatagaacctatgattataaataaatataaatatatatattctccttTTTCCATCTGTAACTTGGGCAATAGTAATGGATTGAAAAAATATGaacttgaagaaaaaaaaaatcaacataaaaTCAACCAACTCACCA

Function

symbol description
osbpl9 Predicted to enable sterol binding activity and sterol transporter activity. Predicted to act upstream of or within lipid transport. Predicted to be active in cytosol; intracellular membrane-bounded organelle; and membrane. Orthologous to human OSBPL9 (oxysterol binding protein like 9).

NR:

description
PREDICTED: oxysterol-binding protein-related protein 9 isoform X5

GO:

id name namespace
GO:0006869 lipid transport biological_process

KEGG:

id description
K20465 OSBPL9_10_11, ORP9_10_11; oxysterol-binding protein-related protein 9/10/11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671015.1 True 2778 mRNA 0.48 15 2674216 2692784

Neighbor

gene id symbol gene type direction distance location
LOC107196890 osbpl9 coding upstream 12760 2616841 ~ 2661456 (+)
LOC103025499 NA coding upstream 57544 2603333 ~ 2616672 (+)
LOC103037045 NA coding upstream 71602 2599242 ~ 2602614 (+)
LOC103035089 NA coding upstream 76580 2584545 ~ 2597636 (+)
LOC103026437 LOC108425081 coding upstream 90897 2527469 ~ 2583319 (+)
tor3a tor3a,LOC108266023,LOC107548256,LOC107699619,LOC107743897,LOC107657890 coding downstream 32701 2725485 ~ 2734540 (+)
LOC103024869 calr,LOC108265943,LOC102308154,LOC106512241,LOC105936842,LOC108425050,LOC103464072 coding downstream 43520 2736304 ~ 2744452 (+)
eps15 eps15 coding downstream 55060 2747844 ~ 2809424 (+)
ttc39a ttc39a,LOC107743871,LOC107599797,LOC107657886,LOC107752432 coding downstream 136151 2828935 ~ 2876428 (+)
rnf11 rnf11,rnf11b coding downstream 188901 2881685 ~ 2917431 (+)
G49150 NA non-coding upstream 1403 2670817 ~ 2672813 (+)
G49116 NA non-coding upstream 194845 2432799 ~ 2479371 (+)
G49117 NA non-coding upstream 244573 2428120 ~ 2429643 (+)
G49122 NA non-coding upstream 246305 2425130 ~ 2427911 (+)
G49121 NA non-coding upstream 269488 2404515 ~ 2404728 (+)
G49154 NA non-coding downstream 14239 2707023 ~ 2709154 (+)
LOC103026017 NA non-coding downstream 15920 2708704 ~ 2724228 (+)
G49163 NA non-coding downstream 147528 2840312 ~ 2840783 (+)
G49164 NA non-coding downstream 174678 2867462 ~ 2869521 (+)
G49162 cdkn2c non-coding downstream 262470 2955254 ~ 2976029 (+)
G48714 NA other upstream 1862951 808155 ~ 811265 (+)
faf1 faf1,LOC107743872 other downstream 290062 2982846 ~ 3152050 (+)
spata6 dnttip2,LOC107700367,LOC107603264,LOC107757995,LOC102796155 other downstream 1507155 4199939 ~ 4239873 (+)
G49475 NA other downstream 1551744 4244528 ~ 4246227 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 2926375 5619159 ~ 5627452 (+)
LOC103023397 NA other downstream 3084268 5777052 ~ 5789265 (+)

Expression


Co-expression Network