LOC111192666


Basic Information

Item Value
gene id LOC111192666
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 31477576 ~ 31480466 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002650071.1
AAGAATCCTCACAGGGACCAGGACACGCCCAGGGTGTCCTACCTAATTTCAATGCACCTAACATACAAGACAACCAGTCAACACAGGCAGAACCCTCTCAGGGAACAGGAAATGGACAGCATGTTCTAGCTTATTCACCTACCGTGCAACACGAAACGTCATTTTGGCCCATGTCCAACCAGTCCACATGGGCGGAATCCTTTCAGGGACCAGGACATGCCCAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002650071.1 True 226 lncRNA 0.52 3 31477576 31480466

Neighbor

gene id symbol gene type direction distance location
tmem132c si:dkeyp-14d3.1,LOC107676622,LOC107728438,LOC107659267,LOC107550917,LOC108442515 coding downstream 44925 30967612 ~ 31432651 (-)
glt1d1 NA coding downstream 634276 30762503 ~ 30843300 (-)
LOC103041976 cgnl1 coding downstream 927647 30528755 ~ 30549929 (-)
LOC103045861 LOC108435653 coding downstream 980264 30437437 ~ 30497312 (-)
polr2m LOC108435653 coding downstream 1041043 30423138 ~ 30436533 (-)
LOC111192668 NA coding upstream 96887 31577353 ~ 31579788 (-)
LOC103041868 NA coding upstream 117996 31598462 ~ 31610954 (-)
LOC103043728 NA coding upstream 263406 31743872 ~ 31759081 (-)
LOC103045458 olfml2a,olm2a,LOC105894692,LOC104951789 coding upstream 312621 31793087 ~ 31825503 (-)
LOC103027824 NA coding upstream 363608 31844074 ~ 31849517 (-)
LOC111192663 NA non-coding downstream 1939 31474911 ~ 31475637 (-)
LOC111192662 NA non-coding downstream 101720 31372867 ~ 31375856 (-)
G55663 NA non-coding downstream 474074 30987332 ~ 31003502 (-)
G55654 NA non-coding downstream 487896 30982056 ~ 30989680 (-)
G55659 NA non-coding downstream 532012 30942243 ~ 30945564 (-)
G55757 NA non-coding upstream 94903 31575369 ~ 31581069 (-)
G55779 golga1,LOC107703180 non-coding upstream 229839 31710305 ~ 31712936 (-)
G55788 NA non-coding upstream 248317 31728783 ~ 31730244 (-)
G55858 NA non-coding upstream 339466 31819932 ~ 31863678 (-)
G55874 NA non-coding upstream 386933 31867399 ~ 31869197 (-)
LOC103046862 LOC108410878 other downstream 1543146 29896515 ~ 29934430 (-)
kiaa1671 NA other downstream 1636823 29744028 ~ 29840753 (-)
LOC103031600 lrrc75ba,LOC108414797,LOC107753104,LOC107712478,LOC105891565 other downstream 2877066 28554727 ~ 28600510 (-)
LOC111192657 NA other downstream 3053621 28417733 ~ 28423955 (-)
G55023 cunh5orf51,clg13h5orf51,LOC103038767,LOC107667559,LOC107686395,LOC106585203 other downstream 3320127 28153421 ~ 28157449 (-)
LOC103027498 LOC108411246,LOC106585447 other upstream 155015 31635481 ~ 31690808 (-)
LOC103043418 arpc5la,arpc5l,LOC108411248,LOC107571143,LOC108265305,LOC107550963,LOC107753090,LOC107676626 other upstream 250998 31731464 ~ 31740221 (-)
LOC103021360 LOC108440818,LOC107659619,LOC108265551,LOC107726210,LOC107553829,LOC107684495 other upstream 1291561 32772027 ~ 32802160 (-)
LOC103023237 NA other upstream 1668608 33149074 ~ 33177650 (-)
LOC103038119 LOC108412501,LOC107754395,LOC107671045 other upstream 3610264 35090730 ~ 35108420 (-)

Expression


Co-expression Network