trnak-uuu_18


Basic Information

Item Value
gene id trnak-uuu_18
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25580206 ~ 25580278 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnak-uuu_18
gcccggatggctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnak-uuu_18 True 73 tRNA 0.58 1 25580206 25580278

Neighbor

gene id symbol gene type direction distance location
LOC103035302 NA coding downstream 35679 25541306 ~ 25544527 (-)
LOC103036837 NA coding downstream 39807 25532060 ~ 25540399 (-)
LOC103035606 LOC108441999 coding downstream 59980 25510629 ~ 25520226 (-)
LOC103037139 LOC108442001,LOC108265961,LOC107697601,LOC107712558,LOC105890695 coding downstream 74660 25486562 ~ 25505546 (-)
LOC103046226 znf608 coding downstream 96222 25473885 ~ 25483984 (-)
lrrc2 lrrc2 coding upstream 31844 25612122 ~ 25621265 (-)
efna5 efna5,LOC108265807,LOC108430322,LOC106585191,LOC100702629 coding upstream 200151 25780429 ~ 25966065 (-)
fbxl17 fbxl17,LOC107570989 coding upstream 514833 26095111 ~ 26529204 (-)
ubox5 NA coding upstream 1014062 26594340 ~ 26599322 (-)
lzts3 lzts3,LOC108265122,LOC107712591 coding upstream 1021185 26601463 ~ 26614549 (-)
trnak-uuu_17 NA non-coding downstream 1591 25578543 ~ 25578615 (-)
trnak-uuu_16 NA non-coding downstream 1843 25578291 ~ 25578363 (-)
trnak-uuu_15 NA non-coding downstream 2675 25577459 ~ 25577531 (-)
trnak-uuu_14 NA non-coding downstream 7567 25572567 ~ 25572639 (-)
trnak-uuu_13 NA non-coding downstream 8901 25571233 ~ 25571305 (-)
trnak-uuu_19 NA non-coding upstream 180 25580458 ~ 25580530 (-)
trnak-uuu_20 NA non-coding upstream 761 25581039 ~ 25581111 (-)
trnak-uuu_21 NA non-coding upstream 1593 25581871 ~ 25581943 (-)
trnak-uuu_22 NA non-coding upstream 1845 25582123 ~ 25582195 (-)
trnak-uuu_23 NA non-coding upstream 3758 25584036 ~ 25584108 (-)
fam240a LOC108441996 other downstream 18067 25549350 ~ 25562139 (-)
jcad NA other downstream 582086 24950612 ~ 24998120 (-)
svil NA other downstream 659616 24786251 ~ 24920590 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other downstream 1228270 24341400 ~ 24351936 (-)
G53996 NA other downstream 2488231 23091306 ~ 23091975 (-)
LOC103042298 slc35d2 other upstream 978128 26558406 ~ 26569939 (-)
ccl28 NA other upstream 993122 26573400 ~ 26576425 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 1180854 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 1586408 27166686 ~ 27168510 (-)
G54873 NA other upstream 1888940 27469218 ~ 27473347 (-)

Expression


Co-expression Network