trnak-uuu_25


Basic Information

Item Value
gene id trnak-uuu_25
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25584869 ~ 25584941 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnak-uuu_25
gcccggatggctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnak-uuu_25 True 73 tRNA 0.58 1 25584869 25584941

Neighbor

gene id symbol gene type direction distance location
LOC103035302 NA coding downstream 40342 25541306 ~ 25544527 (-)
LOC103036837 NA coding downstream 44470 25532060 ~ 25540399 (-)
LOC103035606 LOC108441999 coding downstream 64643 25510629 ~ 25520226 (-)
LOC103037139 LOC108442001,LOC108265961,LOC107697601,LOC107712558,LOC105890695 coding downstream 79323 25486562 ~ 25505546 (-)
LOC103046226 znf608 coding downstream 100885 25473885 ~ 25483984 (-)
lrrc2 lrrc2 coding upstream 27181 25612122 ~ 25621265 (-)
efna5 efna5,LOC108265807,LOC108430322,LOC106585191,LOC100702629 coding upstream 195488 25780429 ~ 25966065 (-)
fbxl17 fbxl17,LOC107570989 coding upstream 510170 26095111 ~ 26529204 (-)
ubox5 NA coding upstream 1009399 26594340 ~ 26599322 (-)
lzts3 lzts3,LOC108265122,LOC107712591 coding upstream 1016522 26601463 ~ 26614549 (-)
trnak-uuu_24 NA non-coding downstream 509 25584288 ~ 25584360 (-)
trnak-uuu_23 NA non-coding downstream 761 25584036 ~ 25584108 (-)
trnak-uuu_22 NA non-coding downstream 2674 25582123 ~ 25582195 (-)
trnak-uuu_21 NA non-coding downstream 2926 25581871 ~ 25581943 (-)
trnak-uuu_20 NA non-coding downstream 3758 25581039 ~ 25581111 (-)
trnak-uuu_26 NA non-coding upstream 180 25585121 ~ 25585193 (-)
trnak-uuu_27 NA non-coding upstream 920 25585861 ~ 25585933 (-)
trnak-uuu_28 NA non-coding upstream 1752 25586693 ~ 25586765 (-)
trnak-uuu_29 NA non-coding upstream 3164 25588105 ~ 25588177 (-)
trnak-uuu_30 NA non-coding upstream 3416 25588357 ~ 25588429 (-)
fam240a LOC108441996 other downstream 22730 25549350 ~ 25562139 (-)
jcad NA other downstream 586749 24950612 ~ 24998120 (-)
svil NA other downstream 664279 24786251 ~ 24920590 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other downstream 1232933 24341400 ~ 24351936 (-)
G53996 NA other downstream 2492894 23091306 ~ 23091975 (-)
LOC103042298 slc35d2 other upstream 973465 26558406 ~ 26569939 (-)
ccl28 NA other upstream 988459 26573400 ~ 26576425 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 1176191 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 1581745 27166686 ~ 27168510 (-)
G54873 NA other upstream 1884277 27469218 ~ 27473347 (-)

Expression


Co-expression Network