XLOC_007892 (pimr212)


Basic Information

Item Value
gene id XLOC_007892
gene name pimr212
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 26395314 ~ 26400501 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015408
gtgttcacagtgaggaaccatcgctGGAGGAACCATCACTGGATCTTAGCTTCTTCTCGGCTGAGTCAAGCTGGAGTGAAGATCTCTCTTCAGACTCCGTAACTGTTGCGTCGAGCTGGAGTGATGATCTCTCTTCAGGCTTCTTAACTGCTGAGTCTGGCTGTGGTGATGATGAACCTCTATTTGTTTTCTCTGCTGAGCCTGAGAAATTGATGGAGGACAAAGTGACACAAATCATTGAGATCAATTCTCACAGCTATGAAATTGAATCTCAGCTGGGTGAAGGAGGCTGTGGAGCCGTTTTCGCAGGGACCCGTCTAGAAGATGGCCTTCAGGTGGCAGTAAAAGTGTGCGATTTCAAGGAGGAGAAGCGATTCATCAGTGTTGATGGGATTGAAAATCCACTTCCACTGGAGATCGCTCTGCACTTTCTTGCCAATAAAAGCCCCAAGGTTAAGGAAATCGTTGAGCTTCTAGACTGGAAGGTGGAGGATGATAACTACTTCATGGTGCTAGAGCAGCCCATACCCTGCATGAGCTTGCATGAATTCCTTCTCGACTGCAAAGGGATTGTTCCAGAGGACAAGTTACGAAAAATCATGTACCAGACAACAATTGCAGCCCAAACATGCTGCCAGCGTGGAGTTCTTCATCGTGATATCAAGCTGGAGAACTTGCTGATTAATCCGGACACTCTTGAGGTCAAACTGATTGACTTCGGGTGCGGCGAGCTTCTTACTGAGGACAGTTACCAATCCTTTAGAGGCACCAGAGAGTACTTCCCTCCAGAGTTTTTGACAACTGGAAGATACCACGGGGAACCAGCGACAGTCTGGTCACTTGGAGTTGTTCTGTTTCTGCTAGTTTTCTACAGATTTCCAGAACAAAGTGACATGCCCAGAATGAACAACAGAAGGTTGAGGATTAAGGGCTTGTCAAGAGACTGCTGCGATTTCTTCCACGGCTGTCTGCAGTTCAACTACAAGGATCGGCTTGAACTGCAAAACCTCAGTTCCCATAAGTGGTTTAGGACGAGAACAAGGAGGAATGAGGAGAACTGTCCTTCTTTAACAGATGGATCTAGTCAATCTAACACCCCATAGCTTCCAATTAAATtacttgtaaataaaaaaaagaaatgataaa
>TCONS_00015409
CATTGCTTTATTTGACAGATATTGAGAAGCTGTACAAAGTTTGCTCGGAGTAATTTGCTCTGCTAATACTGTCAATTGATAGTGTACGGTTTTATTGAGGATCACTTTGATAGATTACCTTTACTTGCAgtaaatttcagtttttattgtAAGTGTATTTTGCTTTTCTCATCTATAAGTGTACGTAAGTTTACCCAACAATGTTACTTACCGTCCTCGGAGTTATTGCTCTCTTCCTGAGAGGAAGAAACGCCAACAACACCGAAGAAGAGGGCCAGAATGATGTACCACCTGTGGGGAACAGTGACGgTCGAGAAATCGATGACTGGTGTAAAGAGTCATCACTGGAagagcctgtcagtgttcacagtgaggaaccatcactagtagagcctgtcagtgttcacagtgaggaaccatcactagtagagcctgtcagtgttcacagtgaggaaccatcactagtagagcctgtcagtgttcacagtgaggaaccatcactagtagagcctgtcagtgttcacagtgaggaaccatcaCTAGTAGAGCCTGccagtgttcacagtgaggaaccatcaCTGGAagagcctgtcagtgttcacagtgaggaaccatcaCTAGTAGAGCCTGccagtgttcacagtgaggaaccatcaCTAGTAGAGCCTGccagtgttcacagtgaggaaccatcaCTGGAagagcctgtcagtgttcacagtgaggaaccatcaCTAGTAGAGCCTGccagtgttcacagtgaggaaccatcaCTAGTAGAGCCTGccagtgttcacagtgaggaaccatcactggtagagcctgtcagtgttcacagtgaggaaccatcactggtagagactgtcagtgttcacagtaaggaaccatcactggtagagactgtcagtgttcacagtgaggaaccatcactggtagagactgtcagtgttcacagtgaggaaccatcgctGGAGGAACCATCACTGGATCTTAGCTTCTTCTCGGCTGAGTCAAGCTGGAGTGAAGATCTCTCTTCAGACTCCGTAACTGTTGCGTCGAGCTGGAGTGATGATCTCTCTTCAGGCTTCTTAACTGCTGAGTCTGGCTGTGGTGATGATGAACCTCTATTTGTTTTCTCTGCTGAGCCTGAGAAATTGATGGAGGACAAAGTGACACAAATCATTGAGATCAATTCTCACAGCTATGAAATTGAATCTCAGCTGGGTGAAGGAGGCTGTGGAGCCGTTTTCGCAGGGACCCGTCTAGAAGATGGCCTTCAGGTGGCAGTAAAAGTGTGCGATTTCAAGGAGGAGAAGCGATTCATCAGTGTTGATGGGATTGAAAATCCACTTCCACTGGAGATCGCTCTGCACTTTCTTGCCAATAAAAGCCCCAAGGTTAAGGAAATCGTTGAGCTTCTAGACTGGAAGGTGGAGGATGATAACTACTTCATGGTGCTAGAGCAGCCCATACCCTGCATGAGCTTGCATGAATTCCTTCTCGACTGCAAAGGGATTGTTCCAGAGGACAAGTTACGAAAAATCATGTACCAGACAACAATTGCAGCCCAAACATGCTGCCAGCGTGGAGTTCTTCATCGTGATATCAAGCTGGAGAACTTGCTGATTAATCCGGACACTCTTGAGGTCAAACTGATTGACTTCGGGTGCGGCGAGCTTCTTACTGAGGACAGTTACCAATCCTTTAGAGGCACCAGAGAGTACTTCCCTCCAGAGTTTTTGACAACTGGAAGATACCACGGGGAACCAGCGACAGTCTGGTCACTTGGAGTTGTTCTGTTTCTGCTAGTTTTCTACAGATTTCCAGAACAAAGTGACATGCCCAGAATGAACAACAGAAGGTTGAGGATTAAGGGCTTGTCAAGAGACTGCTGCGATTTCTTCCACGGCTGTCTGCAGTTCAACTACAAGGATCGGCTTGAACTGCAAAACCTCAGTTCCCATAAGTGGTTTAGGACGAGAACAAGGAGGAATGAGGAGAACTGTCCTTCTTTAACAGATGGATCTAGTCAATCTAACACCCCATAGCTTCCAATTAAATtacttgt

Function

symbol description
pimr212 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070424-268 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000037246

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015408 False 1146 mRNA 0.46 6 26395314 26397849
TCONS_00015409 True 2068 mRNA 0.46 7 26395337 26400501

Neighbor

gene id symbol gene type direction distance location
XLOC_007891 b4galt7 coding downstream 2839 26379484 ~ 26392475 (-)
XLOC_007890 emx3 coding downstream 18270 26363537 ~ 26377044 (-)
XLOC_007889 fat2 coding downstream 218158 26103330 ~ 26177156 (-)
XLOC_007888 mtnr1al coding downstream 301142 26075799 ~ 26094172 (-)
XLOC_007887 NA coding downstream 327434 26062022 ~ 26067880 (-)
XLOC_007893 tmed9 coding upstream 4139 26404640 ~ 26411918 (-)
XLOC_007894 lman2 coding upstream 12916 26413417 ~ 26425416 (-)
XLOC_007895 pld7 coding upstream 25584 26426085 ~ 26436951 (-)
XLOC_007896 syvn1 coding upstream 52239 26452740 ~ 26465729 (-)
XLOC_007897 smad5 coding upstream 66619 26467120 ~ 26498325 (-)
XLOC_007641 CU855896.1 misc downstream 23987474 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 23987883 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 23988242 2406945 ~ 2407072 (-)
XLOC_007880 dre-mir-458 non-coding downstream 1236108 25159129 ~ 25159206 (-)
XLOC_007875 NA non-coding downstream 1335767 25055971 ~ 25059547 (-)
XLOC_007873 NA non-coding downstream 1393667 24997012 ~ 25001647 (-)
XLOC_007872 AL645792.3 non-coding downstream 1436918 24958280 ~ 24958396 (-)
XLOC_007899 NA non-coding upstream 281045 26681546 ~ 26702352 (-)
XLOC_007901 BX571940.1 non-coding upstream 314691 26715192 ~ 26715595 (-)
XLOC_007902 NA non-coding upstream 375717 26776218 ~ 26796713 (-)
XLOC_007904 CT990607.1 non-coding upstream 775225 27175726 ~ 27175841 (-)
XLOC_007905 NA non-coding upstream 921718 27322219 ~ 27339439 (-)

Expression


Co-expression Network