CI01000016_00012244_00028573


Basic Information

Item Value
gene id CI01000016_00012244_00028573
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11615 ~ 28573 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00012244_00028573.mRNA
ATGATGAAGGTGACCACCAGCACAGCACCATGGGGAGCGAAGGGGGCACGGCAGGGGAAGGTACCCCTCCTCCCAAGCGCAAGGGAAAGTTCTCTACCCTGGAATCAGGTGAGGCCCATGGCCACAAGACACACTATGTGAAGAATGGTCACACTCTGCCTGTAGGAGTTGGTGGAGGTCTGGGGCTAGAGCAGGTTCACTCGCCCTCTGAATCTGAATTCAGGGTCAACCCTGTCTGGCTGCCACAGCACGATGACCGCAGAGGTCGCGCCCCCTCCGATGGGGATCATCGCGGAGCATTGGGCCCCCGGGCCTCCAATCAGGACGAAGGCAGGAGAAGTGGTTGGTCTGTCGGGACGGAGGACTGGAAATCTAATCTAGCCTGGCAGGGAGATGATATCCGACGTGGAGGAAGACCTCACGCTGAAGTGGACAAGAGGCCTGGGCTAATGAAAGCCCCATCTGAGGATGGGCGCAGGACTCGCCCCGAATCAGACTGGAAGCCGACGCTTCCCCGTCACTCGTCTGTTGAAGAGGGAAGGGGAAGACGAGAGTCTGACAGCAGTCAATACGTTCCTAACTCAGAGGTTCTGAGGGACACACTGCGAGAGCCTCTGCCCCCCAAGCAATCTGTCATGCCCCCGAAATGGCTGATGACCTCCACCCCGGAATCCGGTGTTGACAGCTTGCCTCGCACCCCTGTCCACAACCCTGCAGCTGGACCATCCTCAATGGGCTCTGTCCCAACTCAGCCCACTAAACAGCCCCCCCTCCCTCCACCCAAGCCAATCAACCGTAGCAACAACCCTGCCATGTTGGCCTCCACCCTGCACGGGGGTGACGGCAGCGATTTCCCCCTCTACTGGTCCTGTTGGAAGCGTGAGGGTGACCATGACGTCTACCTGTCCCTGCCTGTCTACCTCTGCCGGCGGGCAGGAGGCATGCGCACAGAGGAACCGCCTGCCCGTCAAGCACCCGTTCCCTTACACATCATGATCCAGAGGGCGCTCAGTAGCCCAGGACCCACCCTCCCACACCCAGATGGCTCCCAGCGTGCCCACTCACTGCTGTTTGAGACACCACCGGAGTACCAGGGCGGCCGCCCACTGCCAGTCACCATCCAGCCTCTCAAACTATGTCTGGTGGGGGACCTGAGCGTCAGCATCATCCCTGAAGGAAACAACAGCAGCGAGGAAGAGGAAGATGAGGAAGATCAGCAGCCAGAGGAGAGCGATTCAGACGGACCCGTGCTGTACAAGGATGATGAATCAGATGAAGACGAGGAGGATGATAGCCCACCAAGTGCTCTGGCCAGCAGGGTGAAAAGGAAGGACACATTGGCGCTGAAGCTGAGCAGTCGGCCCTCTGCCCCAGACAGACAGGCTCCTGAGAGGCAGGCCAAAGTAGAGCACACGGGTCTGTCGTGGCAGAGCAAGGAGCAGTGGGAGGCCATCCGCACACAGATTGCCAAAAACGAAGCGGACAGACAAGCAGAGGTCAGGGAGATCAAGCGCAGACTCACCAGAAAGTTGAGTCAACGACCGACTGTAGCCGAACTACAGGCTCGGAAAATATTACGTTTCCACGAGTATGTGGAAGTCACGTGCGCTCAGGACTATGACCGCCGTGCTGACAAGCCATGGACCAAACTCACCCCTGCAGACAAGGGTCACCTGGAGCATTTAGAAACAAATCAAAACAAAAACAAAACAGACCGTTTCTCAGTTGTCCACCCACTGACGTGTGGGACGGGTGACCTCTGGGGGACAGATGCAGTATTTCTCCTGGACTTTAGGGGACCCACGTGCCAAGACCGAGAGGGATGAAGGACTTTTTAGAGGATGTTACTTGTGCCAATGGCAGATATTCCTCTCTCTACTCTCTGAATGGCCTTTTTTCTGCTTTTACTTCATATGATAAACTTTATTTCCTTTCAGGGAAGTGTAACAAAGTTAAAAATAATAGTAATAATAATGATGTGACAATAATAAATACAATAATAAGTGTTAGTTACTGACAAATAGCAGGGCAGACAGAGGAACTGCAAGAATAAGGCCTGAGCCTGGACATTAATTGTGTATTTGTGTATGTTTGTATAGGCTGCTGTAATTTTTCTCTTAGTTTGGAACGTTCTAAATGTTAGATACTTTAAGGCTCAAGATTTTTTTTTTTTTATTTCATAACTTTGGCTTTGGCCCTCTTTATTCAAGACAGGGTTACAGATTCCCCCTACTTTGTGGTCCTCACTGTTTGAAAGGAATAGAACATAGGTTAAATTTTTAGATAGAATGTAAGCGTTGCATATCTCACTATTGATCTACAGCGAAACTGTGATCTGTTATCTTTTACTATCTTTTTTTATTAATCATATCACCTCTGTAAAAGTGAGGTCCAGCTATTTCAGTTTTAAGAAGTGTCCAAATTATGTTTACAAAATATTTTATTTCTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00012244_00028573.mRNA True 2455 mRNA 0.51 11 11615 28573

Neighbor

gene id symbol gene type direction distance location
CI01000016_00002941_00010117 RCC1 coding downstream 1498 2493 ~ 10117 (-)
CI01000016_00068703_00072323 NA coding upstream 40085 68658 ~ 73081 (-)
CI01000016_00079894_00094596 HIVEP3 coding upstream 50371 78944 ~ 94596 (-)
CI01000016_00099623_00100245 NA coding upstream 70261 98834 ~ 100245 (-)
CI01000016_00153934_00154312 NA coding upstream 125335 153908 ~ 155622 (-)
CI01000016_00166492_00172759 SERINC2L coding upstream 137512 166085 ~ 172759 (-)
G93805 NA non-coding upstream 30785 59358 ~ 59595 (-)
G93801 NA non-coding upstream 34244 62817 ~ 150965 (-)
G93802 NA non-coding upstream 103979 132552 ~ 138874 (-)
G93829 NA non-coding upstream 160031 188604 ~ 189338 (-)
G93835 NA non-coding upstream 170585 199158 ~ 202946 (-)
G94786 NA other upstream 2242263 2270836 ~ 2276275 (-)
G95070 NA other upstream 2956687 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 3607034 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 3837188 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 4884135 4918975 ~ 4922518 (-)

Expression


Co-expression Network