CI01000016_00099623_00100245


Basic Information

Item Value
gene id CI01000016_00099623_00100245
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 98834 ~ 100245 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00099623_00100245.mRNA
GAGGGGCCTTCTGGCGGCATGGGCCAGCGGCACCGCCTCCTCCGGTTTGTCTTTGATGAACATGTTGAGGTCTCAGCAAGGGGACACGTGGGGTCATGAGATTCTGCCACTGGCGTGTGGAGTCTTGACAAGTTGCCATGTGGCCTCTAGGGTCCTTGAATCTACTCTCAACTCCATTAAAGAACCCATGTTCCACAGCAGCAGGGTCAGCTCACCTGGAAACCACTAGAAGCGAGTCGACCACATCCAGTCAGGAGATATTTATATCATTCTTGGTGGTGCAATTAACATACGACGAACAAGGTGACATTTCTGTTATCAAATCTGGCGAGTTGTCATTAGGACAGTGGGAGGCAGAGAAAAAACCAAAAGATAGGAGAGCTTTAAAATGTGTTTTTCCACTCCTGTCTATAAGCTTCTGTGGGCTATTCTAAGAAATGGCTCGGCGGTTTTGTTATTTCCTATACTCAAGCACACTAATTTTACATTCTCTTACTAGTTCATCCATGATACTTGATCCAGATCAGATTACTATGCCAGCAAATCTCAAAAGTGAAACCAAAACTAAGTTACCATTTTAGAGCAGTCTGTTTTCTGTGTTTAAACATTTGTGCAAGATTAATACTAACTACACTTTAAAGCGTTAGTTCACCCAAAAATGAAAAAAATTGTCATCATTTACTCACCCTCATGTCATTCCAAACCTATAAGACTTTTTTTGAAACACAAATTAAGATATTTTAATGAAATCTGAGAAATTTCTGTCCCTCCATTGACAGTCCATGCAACTACAACTTTGTCACTTTAAAAAGTTTCATAAAGAGGTCGTAAAACTAATGAATCGAGCAGTTTAGTCCAAATTTTCTGAAGAGATTCAATCACTTTATATGATGAACAGATTGAATTTAGGCTTTTATTCACATATAAACATTCGTCAGCGAACATAAACAGAAGCTCAACCATAAGTTTGCTTGGCGCACAAGAATAAACCTCATTGGTTCGTGCAGAAAATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00099623_00100245.mRNA True 1018 mRNA 0.40 2 98834 100245

Neighbor

gene id symbol gene type direction distance location
CI01000016_00079894_00094596 HIVEP3 coding downstream 4238 78944 ~ 94596 (-)
CI01000016_00068703_00072323 NA coding downstream 25753 68658 ~ 73081 (-)
CI01000016_00012244_00028573 NA coding downstream 70261 11615 ~ 28573 (-)
CI01000016_00002941_00010117 RCC1 coding downstream 88717 2493 ~ 10117 (-)
CI01000016_00153934_00154312 NA coding upstream 53663 153908 ~ 155622 (-)
CI01000016_00166492_00172759 SERINC2L coding upstream 65840 166085 ~ 172759 (-)
CI01000016_00251025_00251471 GBP coding upstream 149973 250218 ~ 251486 (-)
CI01000016_00448107_00452861 CCNE2 coding upstream 347613 447858 ~ 452861 (-)
CI01000016_00456765_00460615 TP53INP1 coding upstream 354583 454828 ~ 461209 (-)
G93805 NA non-coding downstream 39239 59358 ~ 59595 (-)
G93802 NA non-coding upstream 32307 132552 ~ 138874 (-)
G93829 NA non-coding upstream 88359 188604 ~ 189338 (-)
G93835 NA non-coding upstream 98913 199158 ~ 202946 (-)
G93873 NA non-coding upstream 180749 280994 ~ 281211 (-)
G93934 NA non-coding upstream 300248 400493 ~ 401772 (-)
G94786 NA other upstream 2170591 2270836 ~ 2276275 (-)
G95070 NA other upstream 2885015 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 3535362 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 3765516 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 4812463 4918975 ~ 4922518 (-)

Expression


Co-expression Network