CI01000016_00153934_00154312


Basic Information

Item Value
gene id CI01000016_00153934_00154312
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 153908 ~ 155622 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00153934_00154312.mRNA
ATGGGGGAAGGATCAGATTTACATGGTAGTGCAAGTAACTGAAAAATCCAATATTACGGGTGATGGTGTACATTGAGATGTATTGCAACCTATTGATTTTACTCTGAGCTATTATATTGCATGTGTATCAAAGTCAATTGTTTACATATATGACATGTAGAGTCACTATATAATATCTCATATTACAAAAAGTGCTCTGGAAATACTATGGTATCAATGTTATCGTTAACTAAAATGAAACTAATGAAAAAATTTCAACTTTCAGAAATTGAAATGAAGCTGTATTAGATGAACATTTTCAACTTAAAAAAACAGTTAATTTAAAAAAAGTACTAAAATTACTGAAACTGAAAAAATTAAATTTAACGCTAAATATAAAAAAAAATTAATGGGTGATTTAAAGTCAGCATGAAATGGAAGTTCCAATTTCTTTTCTTCTCTATTGTGATGTATATGGCTTTTCAACAAAAAAATGAATGGCAGGACTTGATTTCGTCCATCGGGAATCGATTGGATCGTTGGATATTCATAGTTTGCGATTGCTGTGATTGACAGGTTGTCTCACCCTTGCGCCAGAGATGTTGATGTTGCTGCAAGAGAAAGAGGAAGTTACTTTGATTAAAGATTACGAGCGCACATGAATTAAAAAAATTAATAAATAAAAATTATGTGCAATATTCCATTAAAAAAAAAAAAAAAAACTTTTTTCAATTTTTACTTTAAACCTGGAAATAAACAGAAAGTTTTGGATTTTTACTTTATTATTCTAGATTATGAACCAAATAGAACATATACTTTACATTTCACTCCTGCATTATCTTTGACTCTCTTTGTGTTCCTGCAGCAGGCAGCATTGTTTCTCTCTGTCTCACTCTCTACATCTCTGTCTCTCGCTCTCTCCCTCTCTTTGGCAGGCTGCTGTATGCCATGCACAGGCGCAGCCCGACTCTGTGGGGAGGCTGATCTAGTTATATAACAGTCGGTGCAGCCGTTGTCTGCTGGAAGACGAGCATGCAGGCATCCCTGTTACATAAGCCTGTTAGGATCATATTGTCACACCGTGGAGCATTCACAACGCAGTGTCCTTGCTACTGTGCTTCCCTCTTTCTCTCTCGCTCTTGGGAAAGAAAACCCAACAAAAGGGTGGTCCAATGCAGTTCAGAGAGCGTGAACTTTGCAATCACAGTTAACCCAATCAAAACAGACCTCTCTGCATGGCCTAAACCCCCCACCCACTCGACCGTCACGCACCTCACAGCCACAAGCCCAGTCAGGTGTCCTGTTTGACTCAGCCGAGGACGGCGGCTGTCATGACGATGCAGCCAGCAGCCGTCTCGTTCTCCACAGGGAGTCTGAACGGCAGTGGCATCCAGAGATGGGATCAGGCAGCTGTGAGCTATGACTCATCACCTGAATGCCAGCAAGACATCACTGGGCGTTACGATGGGAAAATGAACACCACCACGCTGGTTTTGTCACGCAATGTTACTCTAATCGACCCCACTGTGACCTTCTTACGCATTCAAGTTTTGCTCAGTTCCTCAAGCACTACTCTTGTTCTTCCTTGAGAGTAATTCGACTCTTGTAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00153934_00154312.mRNA True 1594 mRNA 0.40 2 153908 155622

Neighbor

gene id symbol gene type direction distance location
CI01000016_00099623_00100245 NA coding downstream 53663 98834 ~ 100245 (-)
CI01000016_00079894_00094596 HIVEP3 coding downstream 59312 78944 ~ 94596 (-)
CI01000016_00068703_00072323 NA coding downstream 80827 68658 ~ 73081 (-)
CI01000016_00012244_00028573 NA coding downstream 125335 11615 ~ 28573 (-)
CI01000016_00002941_00010117 RCC1 coding downstream 143791 2493 ~ 10117 (-)
CI01000016_00166492_00172759 SERINC2L coding upstream 10463 166085 ~ 172759 (-)
CI01000016_00251025_00251471 GBP coding upstream 94596 250218 ~ 251486 (-)
CI01000016_00448107_00452861 CCNE2 coding upstream 292236 447858 ~ 452861 (-)
CI01000016_00456765_00460615 TP53INP1 coding upstream 299206 454828 ~ 461209 (-)
CI01000016_00471859_00490955 NAGPA coding upstream 315161 470783 ~ 490955 (-)
G93801 NA non-coding downstream 2943 62817 ~ 150965 (-)
G93802 NA non-coding downstream 15034 132552 ~ 138874 (-)
G93805 NA non-coding downstream 94313 59358 ~ 59595 (-)
G93829 NA non-coding upstream 32982 188604 ~ 189338 (-)
G93835 NA non-coding upstream 43536 199158 ~ 202946 (-)
G93873 NA non-coding upstream 125372 280994 ~ 281211 (-)
G93934 NA non-coding upstream 244871 400493 ~ 401772 (-)
G93954 NA non-coding upstream 353449 509071 ~ 509303 (-)
G94786 NA other upstream 2115214 2270836 ~ 2276275 (-)
G95070 NA other upstream 2829638 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 3479985 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 3710139 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 4757086 4918975 ~ 4922518 (-)

Expression


Co-expression Network