XLOC_007895 (pld7)


Basic Information

Item Value
gene id XLOC_007895
gene name pld7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 26426085 ~ 26436951 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015412
ATGGAGCCAGAGGAGATACAAGGACGTAGATCAGCTGAACATATGACAGATGAGGAAGAGAATGAGAAAGCAACATCGGAGAGGAAGGATGATGCAGAGGAATCCCGCAAAGCAGGGAGACCGCCAATGTCTCGCATCCCTACCTTTCAAAGCTCAGTGGGCCGCAAGCGAGTCACCATCCAGAATGCAGAGTCATCGCCGAAGATAGATGGGTCCAGCCAGCCGAGCCAAAAAGAGAGAGCTGGCTTTACAGAGGCTGGAAGAGTGAAAATGTCAGTATCCGCAGGGAGAGAAACAGCACTGCCCATTCCATCAGCTCGTTTAAATACAAACCCTGCTGATGATCTCTCTCAAACTGATATCTTGGAGCACACCCCCACTGTTTTAGCTCATGAAAAAGATCAATGCCTTGATCAAAAGTCTGAGATTACAAAGGACTCTGATCAGGATGATGTTTCACTTCAACGACCCCCACTCAGGAGTACATGTGAGACGTCTGGTCATGTTGTAGAGCCCGTTTCTGAGTTTGAAACCCAAAATGGGGAGGCTGTCTCAGAAGATGAGCACATATCAGCCCATGGGGCTGTTGTAGAGGATTTGAGTTCCTGTTCTTCTGCTGAAAATGAAGCCTCTGGTCAAGATTGTGAAGAAACTTTGAGAGAAGACATAAAAAAAGAAACCTCATCTCAACCATGTCGGACAGAAGAAAATCTTGTTGTAGAGAATAATGGGAAGCAATGCTTTATTCCAAAGAAGGAGGATGCATCCATAATTAGTGGTCAAGATGAGACTGCCAAGATAGAGAGGCCTACAGacagtaaaaaatgttttaaagaaactGAACAGCAAATTAAACCAGCCAAATCTACTCACATAAAACACACCAAAGACAAGACATTTACACCCTCAAAGACAAAAGGAAGGAGCTGTGCATGTTTCTGGCTCTTGCCATCTGTTCTCCTTCTTTTGGGTGGATTTGCGTTGCATATCTGGCAGTATGGAGTGCCTAAATCTGTGTCACAACTGATGTCGCAACTGGAGCTCCACTGGTTGGAAAGTTTCTGGATGGCTCAAGAGACATGCAGATCTGACTGCAGGCTTACGCTTGTTGAGAGCGTCCCTGAGGGCCTCAACTTCCCCTCCGGCTCGCCACACCTGCCAAGCATTTCAGAAAGTTGGATTAATTTACTAAACAAAGCAAACAGCTCTGTCCACATTGCTGCTTTCTATTTCACACTTCGAGATTCAGACCTGGGGCTTACAGAGCCCTCGTCTGTGCTGggaaaaaaagtgtttaacCAACTGAAGCAGCTTGAACCAAAAGGAGTGAAGTTGAAGATTGCTGTAAACGCCCCTCAGCCATACATTGCAGACACCGATGAACTGGTAGCAACAGGGGCTGAGGTCAGGGGAGTTGACCTACAGAGCATCACTGGAGGCATTTTGCACACTAAACTATGGGTTGTGGATAAGAAACATGTATATTTAGGAAGTGCAAACATGGATTGGCGTTCTCTTACCCAGGTCAAAGAGGTTGGAGTGGCTTTAGAAGACTGCGGCTGTCTAGCGCAGGACGCTTCACGAATTTTTGACGTTTACTGGGACATCGGCGCTCAGAAGAATGGATCTCTACCTCCTTTCTGGCCGGGCCGTTTCTCCGCTCTCTCCAGTTCTAAGTACCCATTAGCTGTTAAATTCAACGGTGTCCCTGCACGTGTCTATTTGTCTAGTTCGCCTCCTCCTTTGTCATCATATGGGCGTTCTGATGACCTGTCAACCATCCTGTCAGTAATTGCTGATGCTGAACGGCTCATTTATGTGTCAGTGATGGACTACCTTCCCATGTCCGAGTTCACAGACCCCATTCGGTTTTGGCCTCTCATTGACTCGGCCCTCCGTGAGGCTGCTTGTACCAGAGGTGTTGAAGTCAGGCTGTTGGTCAGTTGCTGGAATCAGTCTCCTGGTGCCATGTTTGTCTTCCTCCAGTCTTTATCGGTTCTCAACAAGCCGCCTCTGAGCTGCAACATACATATCAAAGTCTTTGAAGTACCGTCAACACGAGAGCAGCAGAGAATTCCGTTCGCACGCGTCAACCACGCCAAGTACATGGTGACTGATCGAGTTGTTTACATCGGAACGTCCAACTGGTCTGAGAATTACTTCACCCAGACGGCAGGGGTTGGGCTGGTTGTGAATCAGACAGGTTCTGCAGTCGGGCAGGGCCAGCAGACTGTTCAGACGCAGCTGCGGGAGATTTTCCAGAGGGACTGGCATTCAGAATATGCCCAAAGCCTCAGTGATGTACATGCAGAGCATTGTAGTGGAAAAAAGCTTACATAATGCACCGGGCTCTTTTATTTGTTATGTTGCTATGCACtatcataaaaaacaacaacaatatcaaCAACAGAAACCAAAAACTCTTCCCTGCGGCATTTCTGCCAACTGATAACTTATTATTGCTGTGTGTATTTGCAAGAAGGATGCtgtgcatttttaatgtttgttataaatatggcatacatttgttattgtttagttttttctttgaTTGTATATTTGAATTATGTGACATTTGCCAGGATAAGGACGACATCCTTGAGCAAGCACTGATCTATGATGTTGAAATGGTTCAAAACATGcatgtaaatgaaatattgttGTAATAGGTGCCTTGGCTGTGAagtttgttttcaaaataaaactacTTTTCAGTAGTTTTCAGTTTTATGCTTTGTAATTAATGtcactattttaaataattatttatgtttaacattggtgacacagtggctcagtggttagtactgtcgcctcacagcaagaaggtcactggttcgagtcctggctgagtcggttggcatttctgtgtggagtttgcatgttctccctgtgtttgcgtgggtgtcctcttgatgctccagtttccccacagtccaagacGTGCACTAAAGgcgaattgaataaagtaaattggcccTTGTGTATGAGTATGcatgtgagagtatatgggtgttttctagtactgctttgtaaaacatgtgccggataaattggcgattcattccactgtggagactcctgatgaataaagggcttaagccaaaggaaaataattcattaattttctttttggctaagtccctttattaatccgggttgccacagcggaatgaactgccaacttatccagcacctttttaagcagtggatgccctttcagccgcaacccatctctgggaaacaaaggaaaattaatgaatgtttattgTTGGAAGAGTTTATTAATGCATCTAATTCAGGGGTCATCAACGGTGCCACATGATCACATGAGTTGCCtgcgggcctgttctaaaaatagctcaccatagcaccttataccagtaagctgcatcgaatattttttgtagctattctttttaaatcacacttggaTTGGTGTAAAATTGATTATGACATTAagttatatacataaaaaaatctatttcagaCAATTGAAGTGTTTTCTattttgttaaatcattgttgacaactattgtgagaaataaTTAAagtgatcaatgtcttcacatagatgaatatcattatttattaatcataacatataataaaacataaattgagga
>TCONS_00015413
TTTTGCAGCCACGTCGCAGAGAGAGGCAGCATCGCTTTTACAAACCCCCTTCTCTTCTCTGTAAACGCCTAACTGGTCCGACAACACGTTTATCTCCTCGCGCTGCGTTCGTCAGACGTTTGTTTACacctttatatttttaaaagagtCACTCGTAACAGATACATTTGCAGTAGTTTACGGCTGTGGTTATGGAGCCAGAGGAGATACAAGGACGTAGATCAGCTGAACATATGACAGATGAGGAAGAGAATGAGAAAGCAACATCGGAGAGGAAGGATGATGCAGAGGAATCCCGCAAAGCAGGGAGACCGCCAATGTCTCGCATCCCTACCTTTCAAAGCTCAGTGGGCCGCAAGCGAGTCACCATCCAGAATGCAGAGTCATCGCCGAAGATAGATGGGTCCAGCCAGCCGAGCCAAAAAGAGAGAGCTGGCTTTACAGAGGCTGGAAGAGTGAAAATGTCAGTATCCGCAGGGAGAGAAACAGCACTGCCCATTCCATCAGCTCGTTTAAATACAAACCCTGCTGATGATCTCTCTCAAACTGATATCTTGGAGCACACCCCCACTGTTTTAGCTCATGAAAAAGATCAATGCCTTGATCAAAAGTCTGAGATTACAAAGGACTCTGATCAGGATGATGTTTCACTTCAACGACCCCCACTCAGGAGTACATGTGAGACGTCTGGTCATGTTGTAGAGCCCGTTTCTGAGTTTGAAACCCAAAATGGGGAGGCTGTCTCAGAAGATGAGCACATATCAGCCCATGGGGCTGTTGTAGAGGATTTGAGTTCCTGTTCTTCTGCTGAAAATGAAGCCTCTGGTCAAGATTGTGAAGAAACTTTGAGAGAAGACATAAAAAAAGAAACCTCATCTCAACCATGTCGGACAGAAGAAAATCTTGTTGTAGAGAATAATGGGAAGCAATGCTTTATTCCAAAGAAGGAGGATGCATCCATAATTAGTGGTCAAGATGAGACTGCCAAGATAGAGAGGCCTACAGacagtaaaaaatgttttaaagaaactGAACAGCAAATTAAACCAGCCAAATCTACTCACATAAAACACACCAAAGACAAGACATTTACACCCTCAAAGACAAAAGGAAGGAGCTGTGCATGTTTCTGGCTCTTGCCATCTGTTCTCCTTCTTTTGGGTGGATTTGCGTTGCATATCTGGCAGTATGGAGTGCCTAAATCTGTGTCACAACTGATGTCGCAACTGGAGCTCCACTGGTTGGAAAGTTTCTGGATGGCTCAAGAGACATGCAGATCTGACTGCAGGCTTACGCTTGTTGAGAGCGTCCCTGAGGGCCTCAACTTCCCCTCCGGCTCGCCACACCTGCCAAGCATTTCAGAAAGTTGGATTAATTTACTAAACAAAGCAAACAGCTCTGTCCACATTGCTGCTTTCTATTTCACACTTCGAGATTCAGACCTGGGGCTTACAGAGCCCTCGTCTGTGCTGggaaaaaaagtgtttaacCAACTGAAGCAGCTTGAACCAAAAGGAGTGAAGTTGAAGATTGCTGTAAACGCCCCTCAGCCATACATTGCAGACACCGATGAACTGGTAGCAACAGGGGCTGAGGTCAGGGGAGTTGACCTACAGAGCATCACTGGAGGCATTTTGCACACTAAACTATGGGTTGTGGATAAGAAACATGTATATTTAGGAAGTGCAAACATGGATTGGCGTTCTCTTACCCAGGTCAAAGAGGTTGGAGTGGCTTTAGAAGACTGCGGCTGTCTAGCGCAGGACGCTTCACGAATTTTTGACGTTTACTGGGACATCGGCGCTCAGAAGAATGGATCTCTACCTCCTTTCTGGCCGGGCCGTTTCTCCGCTCTCTCCAGTTCTAAGTACCCATTAGCTGTTAAATTCAACGGTGTCCCTGCACGTGTCTATTTGTCTAGTTCGCCTCCTCCTTTGTCATCATATGGGCGTTCTGATGACCTGTCAACCATCCTGTCAGTAATTGCTGATGCTGAACGGCTCATTTATGTGTCAGTGATGGACTACCTTCCCATGTCCGAGTTCACAGACCCCATTCGGCTGTTGGTCAGTTGCTGGAATCAGTCTCCTGGTGCCATGTTTGTCTTCCTCCAGTCTTTATCGGTTCTCAACAAGCCGCCTCTGAGCTGCAACATACATATCAAAGTCTTTGAAGTACCGTCAACACGAGAGCAGCAGAGAATTCCGTTCGCACGCGTCAACCACGCCAAGTACATGGTGACTGATCGAGTTGTTTACATCGGAACGTCCAACTGGTCTGAGAATTACTTCACCCAGACGGCAGGGGTTGGGCTGGTTGTGAATCAGACAGGTTCTGCAGTCGGGCAGGGCCAGCAGACTGTTCAGACGCAGCTGCGGGAGATTTTCCAGAGGGACTGGCATTCAGAATATGCCCAAAGCCTCAGTGATGTACATGCAGAGCATTGTAGTGGAAAAAAGCTTACATAATGCACCGGGCTCTTTTATTTGTTATGTTGCTATGCACtatcataaaaaacaacaacaatatcaaCAACAGAAACCAAAAACTCTTCCCTGCGGCATTTCTGCCAACTGATAACTTATTATTGCTGTGTGTATTTGCAAGAAGGATGCtgtgcatttttaatgtttgttataaatatggcatacatttgttattgtttagttttttctttgaTTGTATATTTGAATTATGTGACATTTGCCAGGATAAGGACGACATCCTTGAGCAAGCACTGATCTATGATGTTGAAATGGTTCAAAACATGcatgtaaatgaaatattgttGTAATAGGTGCCTTGGCTGTGAagtttgttttcaaaataaaactacTTTTCAGTA

Function

symbol description
pld7 Predicted to enable catalytic activity. Predicted to act upstream of or within lipid catabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in axial chorda mesoderm.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030219-75 Predicted to enable catalytic activity. Predicted to act upstream of or within lipid catabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in axial chorda mesoderm.

Ensembl:

ensembl_id ENSDARG00000061845

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015412 False 3626 mRNA 0.43 11 26426085 26436760
TCONS_00015413 True 2845 mRNA 0.45 11 26426994 26436951

Neighbor

gene id symbol gene type direction distance location
XLOC_007894 lman2 coding downstream 669 26413417 ~ 26425416 (-)
XLOC_007893 tmed9 coding downstream 14167 26404640 ~ 26411918 (-)
XLOC_007892 pimr212 coding downstream 25584 26395314 ~ 26400501 (-)
XLOC_007891 b4galt7 coding downstream 33610 26379484 ~ 26392475 (-)
XLOC_007890 emx3 coding downstream 49041 26363537 ~ 26377044 (-)
XLOC_007896 syvn1 coding upstream 15789 26452740 ~ 26465729 (-)
XLOC_007897 smad5 coding upstream 30169 26467120 ~ 26498325 (-)
XLOC_007898 tgfbi coding upstream 74090 26511041 ~ 26536504 (-)
XLOC_007899 NA coding upstream 244595 26681546 ~ 26702352 (-)
XLOC_007900 neurog1 coding upstream 266380 26703331 ~ 26704829 (-)
XLOC_007641 CU855896.1 misc downstream 24018245 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 24018654 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 24019013 2406945 ~ 2407072 (-)
XLOC_007887 NA non-coding downstream 358205 26062022 ~ 26067880 (-)
XLOC_007880 dre-mir-458 non-coding downstream 1266879 25159129 ~ 25159206 (-)
XLOC_007875 NA non-coding downstream 1366538 25055971 ~ 25059547 (-)
XLOC_007873 NA non-coding downstream 1424438 24997012 ~ 25001647 (-)
XLOC_007872 AL645792.3 non-coding downstream 1467689 24958280 ~ 24958396 (-)
XLOC_007901 BX571940.1 non-coding upstream 278241 26715192 ~ 26715595 (-)
XLOC_007902 NA non-coding upstream 339267 26776218 ~ 26796713 (-)
XLOC_007904 CT990607.1 non-coding upstream 738775 27175726 ~ 27175841 (-)
XLOC_007905 NA non-coding upstream 885268 27322219 ~ 27339439 (-)

Expression


Co-expression Network