CI01000016_00592794_00596916


Basic Information

Item Value
gene id CI01000016_00592794_00596916
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 592130 ~ 597102 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00592794_00596916.mRNA
ACGCCTTGGTTTATGGGAAAGGCAGAGGATTACGCCTAATCCACTGATCTCCTAATCGTTATGACAAAGACAACAGTGTGCGTGGAGGGAACTTCCTGTGTTTAAAGAGACGGCGAGAGGGGAGGTGACGACAGCGAATGAAATGTGTGTGTGCACGGGTATGTTTTGATCGGTCAGACACCGTACATGAGTCAGCCCGTTGAGAATGCACAGTACAATCACAACATCCTCGAGCCCACGAGAGGTCGGGAGAGAATTTCACTTCATCCTCCTGAACTTGTTTCAGTCACAAAACAAGAGTCGTCATCCTCATGGCTGAGTTTATTTCAACAGCCAGGGCTGTGGTGGCCCCCTATCGCCCTGGCTGGACCCCAGGAATGTGTGGGTCAGTGTGGGTTGCAGTGGGCAGGGAGTCCAGAGAGAGTCTGGCTGATTGATAGAGCCTGCTTTGGGGGGTGGGGGGAGCAGAACGGTAAGCCAGCAAAAGGCCAGCGGCGGGGAGAGAAGAAAAAACGCTTTAACCTGCAGGAGAAAGAAAACTCCGAGGCCCGTCAAGAAAGGAAGAGAGAACGAGAGAAGGAGACGATCGAACGGGAAGATTCGGAAAGCCGGAACAAAACTGAGCACCGTCGCCGGAGGGATCAGTGCAGGGACGCTGGAACAGTATAAAGAGATGCTGCTCCTCGCTGCTCCTCTGCCTTTCTTTCCCCTATCAGTCCGTGTCACCCCCTCACCCTCTTAACCCCTCGCCGAGGGGGTGTTGCTGCTACCTGTATAATTTAAACGTATACTGTATATGCACATGAGAGAGGGGGCGCTCGTCATCCACACAAATGCAGACAGTCAGGACGCCCCTCGAACTTCTCCTTCAGAGGGCACCCTTCACCCCCCTTGGGCCCGGTCTGGTGCTGGATTGAGGCTGAACTGTGTAGCGTGGGGCTGGGCATGTCCGATGATCCGTGGAATGGTTTTTTTAAAGGGGGTCCAGGTACAGCACTGTATCATGGTTTGAATGTAGGTTTTTGTGACATTAAAGTAGAGTTGTTGTATAAACTTCTGTATTTTTGGGGGGCTGAGTAAATTAAAAATGAGCATGCTTACTGCCACCGCGGACATTGCCTGCCGCCAGAGGCTGAGACTGCATGTTGATTGGTGTAAATGGCTAATGAACTGGCTTTCTTCATACTGGATGAGCAACAACACTCTCGCTGCAATGTTTTAACTTCAGTTTTCTCCGAACAAAGTGTTGATTTGCCTGTCTGTATAAACAGGATCTGAGCTTTCCATTGAAGCCATCTGACCAGAAATCAAAAGCACCTGTATGTCAAATAAA

Function

NR:

description
hypothetical protein cypCar_00002136

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00592794_00596916.mRNA True 1333 mRNA 0.51 2 592130 597102

Neighbor

gene id symbol gene type direction distance location
CI01000016_00589778_00591095 METTL6 coding downstream 836 589672 ~ 591294 (-)
CI01000016_00581946_00586945 NA coding downstream 5133 581866 ~ 586997 (-)
CI01000016_00513504_00514565 NA coding downstream 77386 512124 ~ 514744 (-)
CI01000016_00471859_00490955 NAGPA coding downstream 101175 470783 ~ 490955 (-)
CI01000016_00456765_00460615 TP53INP1 coding downstream 130921 454828 ~ 461209 (-)
CI01000016_00601605_00607255 RSPO3 coding upstream 3520 600622 ~ 607255 (-)
CI01000016_00679328_00729780 NA coding upstream 81690 678792 ~ 729966 (-)
CI01000016_00754785_00770356 NA coding upstream 157581 754683 ~ 770356 (-)
CI01000016_00775184_00778097 HINT3 coding upstream 177556 774658 ~ 778097 (-)
CI01000016_00843272_00857193 NA coding upstream 246048 843150 ~ 857296 (-)
G93992 NA non-coding downstream 12347 579217 ~ 579783 (-)
G93988 NA non-coding downstream 15949 574300 ~ 576181 (-)
G93954 NA non-coding downstream 82827 509071 ~ 509303 (-)
G93934 NA non-coding downstream 190358 400493 ~ 401772 (-)
G93873 NA non-coding downstream 310919 280994 ~ 281211 (-)
G94011 NA non-coding upstream 39065 636167 ~ 636370 (-)
G94017 NA non-coding upstream 47571 644673 ~ 644880 (-)
G94073 NA non-coding upstream 148570 745672 ~ 745975 (-)
G94106 NA non-coding upstream 200382 797484 ~ 797719 (-)
G94786 NA other upstream 1673734 2270836 ~ 2276275 (-)
G95070 NA other upstream 2388158 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 3038505 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 3268659 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 4315606 4918975 ~ 4922518 (-)

Expression


Co-expression Network