CI01000016_00679328_00729780


Basic Information

Item Value
gene id CI01000016_00679328_00729780
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 678792 ~ 729966 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00679328_00729780.mRNA
ATTCTTTAACATAACTGCTGCGCCATTCCCATAACAAATTGTCCATTCTCCGATAGTGTCTTTGTTTTTCTTCCATCAGAATCAGTTTGCTTTTTTTTCGGCTCGTTTAATCCATAATCTTTGTCACAGTAAATGCAGGGAGTTCCAGTGTCCCACGTTCACACGACTTCAGTCAGGCCCGCTGTCATGCACTGTACCGCAGTGGACATAAACATAAGGTGGGAATGCAAACAACCCCGCTTCCCATTTCCGCTTTCGCTCACACTCACTCTCAAAATCTCACTTCCACAAGCGTTTGCATTTCAAAAAGGCCTCTCGGACACAGCTCTCGTGAATGGATTGGAGGCTGGCTGGTTTTCTCTATACTCCTTTGCCCTCGGTGTGGATTCCATGTGCTTTTCGTGTCTGCGCGAGGCAGTAGAAACGGCCTCCGCTGTAATCAGTTCAGCCCGGTCGTTATGTTTTGGCAAAGCCTCTGGCACAGGGGAAACCTGGTCTTCTCAGTTTCCTTCTCGAAAACGCTCTCAAGACCAGCTGTTGGAGAAGTATTCAGACGCCCCAGAGATGACCCACAATTATGAAAATGAGCTGAAATCATTAGGAAAACTAGCTGGATATGGTTCAGCGGATCTGGTCACTTGTTTCATTTGTGTATGCGTGTTTTTAGACAGAATGAAAGTGCAGGAGATGATATACAGAACTTTCTCTCTAGCAGCTTGTTGCAGTACACAGACCACAGTGGAGGTGAAGGCCCAGCTCAACCTCCTGATTGTCCTGCATCGTCTAGCAGAGGAGTCCAAGGTGAAGGCCTTTGAGGAGAAATCAGCAACCATCAAAGTTCACCACGTCAGAGCTGTCGCAAAGCCTGAGGTCCAACAATGTGTTGTTGAGGCAGTGATGTTCTCTAACAAGCACAGTGGGTACCTGAGATTGGCAGGTGTTATTGGGTGTCCCACCAGCTCTTCACAATATTTAAGTAACCATAGAAACCAATCCAAGAAACACTTTTTGAGGCTAAATATTGTTTTTGCTGCGCTGGCTGTCCACCATACATGCCTCAAGACTTTGACCGGTCGGGTTGATGGCCGGTTTGAAGTAAGTGTGGGCCCATCTCCTCTAGCGATGCCATGCGCCAGCATAGAGCAATGTGATGATGAACAGCCGTTATCAGTAGATGCCATCTCTGCCTCTGTCAACGGGGCCTTGCTTGGTCAGAGAGCGTGGCTCATTTTCAAAGCATGTGCCAGACGTTCCCCTCTCTTTATGCTACATTTATTACTCCACTTAGATGATATCCTGTATAATTGTCCTTTTTATAAGGTAATGAGGTCATATGGCAGTGACTCAGAAACCACTATGCTTTGGAATATGGAATGTGTTGAAAAGCACACTTCACCTCTTATGAAAACATTTTTGCAAATGTTCCTCCCTTTCACCCCACTCCCCAGCAAAGAGCCAGGGACGTCCCAGCATCATCCTGAGCGGGTTAAGCGCCTGGGAACCACCGGGGAGAGTGTAATTAACTTTAGTTGGTGCCCTGGTTTGCTGAACCATGACCTCACTCGGCCCACCCCCTGTTGCCTCCCAAGGCTCACACTCCGATACCGAGGGAAAATGAAGGCTCGAGAAACGAGGCTAGTGGGAGGATGGAATGCACTTTTAGAAACAACGGGGGCGAAGCACAGGAGGTTCTGTGAGGAGGTCCCGGTCCTGAAGATGGAGACCTCCTGCTCCTCTACTCCCCCGTGTCCTCCTATTGTTGGGAATGGAAGGGGGGCTCACAATGGCTCACATAAAGTCTGCCGAAGTTTTTCGCAAAAACAGCTGCAGACAGGCAAAGATGGATGTGACTTGGTGAAATTCAGTGCCGCTTTTTTCGGATCACATATTTACATGACAGACACTCACCCCGGCGTCTTCTCAACACATCCAGGGCTCAGAGGTCATATTGGTGTGGTGAAGAGAATGCGTATAGCCTCAAAAACTAAACTGTTTATGCCCTAGTTTTGTATTTATCAAAGGTTTTTTTGACCTGTGTAATGTTCAATAAGAGTATTTTCTGGAAGGAAGCCAGAGTTAAAGGGTTAGTTCACCCAAAAATGAAATTTCTGTCATGAATTACTCACCCTCATGTCGTTCCACACCCGTTCCATTGTTCATCTTCGGAACACAAATTAAGATATTTTTGATGAAATCAAAGGATCCGGCCAATAATGAGCTGGCATTCTGACGTAAACAAGGAAGCCTGCACTGAGTTCACTACATATGACAATGATTCAAATTGTTGAATAAAGTCGTTTTTTTGGTTTTTTTTGCGCACAAAAAGTATTCTCGTTACTTCATAACATTAAGGTTGAACCACTGTAGTCACGTTGACTATTTTAACCATGTTTTTAACTACCTTTATGGACGTCAAAAGGTGCAATGACGTTGCTGCCTATGTGTATCTTAATTTGTGTTCCAAAGATGAACGAGGGTCTTACGGGTGTGGAATGACATGAAATTTCATTTTTGGGTGAACTAACCCTTTAAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00679328_00729780.mRNA False 2540 mRNA 0.45 14 678792 729966

Neighbor

gene id symbol gene type direction distance location
CI01000016_00601605_00607255 RSPO3 coding downstream 71537 600622 ~ 607255 (-)
CI01000016_00592794_00596916 NA coding downstream 81690 592130 ~ 597102 (-)
CI01000016_00589778_00591095 METTL6 coding downstream 87498 589672 ~ 591294 (-)
CI01000016_00581946_00586945 NA coding downstream 91795 581866 ~ 586997 (-)
CI01000016_00513504_00514565 NA coding downstream 164048 512124 ~ 514744 (-)
CI01000016_00754785_00770356 NA coding upstream 24717 754683 ~ 770356 (-)
CI01000016_00775184_00778097 HINT3 coding upstream 44692 774658 ~ 778097 (-)
CI01000016_00843272_00857193 NA coding upstream 113184 843150 ~ 857296 (-)
CI01000016_01088942_01089316 NA coding upstream 358586 1088552 ~ 1089339 (-)
CI01000016_01134396_01182271 OSBPL10 coding upstream 403848 1133814 ~ 1182271 (-)
G94017 NA non-coding downstream 33912 644673 ~ 644880 (-)
G94011 NA non-coding downstream 42422 636167 ~ 636370 (-)
G93992 NA non-coding downstream 99009 579217 ~ 579783 (-)
G93988 NA non-coding downstream 102611 574300 ~ 576181 (-)
G93954 NA non-coding downstream 169489 509071 ~ 509303 (-)
G94073 NA non-coding upstream 15706 745672 ~ 745975 (-)
G94106 NA non-coding upstream 67518 797484 ~ 797719 (-)
G94137 NA non-coding upstream 128802 858768 ~ 862962 (-)
G94213 NA non-coding upstream 246914 976880 ~ 978159 (-)
G94786 NA other upstream 1540870 2270836 ~ 2276275 (-)
G95070 NA other upstream 2255294 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 2905641 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 3135795 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 4182742 4918975 ~ 4922518 (-)

Expression


Co-expression Network