CI01000016_01088942_01089316


Basic Information

Item Value
gene id CI01000016_01088942_01089316
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1088552 ~ 1089339 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_01088942_01089316.mRNA
ACCAAGGGTCAAACTCGTGAATGATGCTCTCGAAGCGAATAACTGCGAAAAGTCGAGAGCTGAACCCTGCCAACCAGGCCAGAAAGAGAATGGTGAACGACAGCAAAGACTGCCATCCCGCCGGCTGCGTCAGTCCTCCGGACAGGCCTCCGCCGCCGCATCCAGCCGGGGAGTTGGGCCGTCCGTTGCCCGAGACCGAACCTCCAGCGTTGGAGCTCGCTTTGTGCTTACAGTCGGAGGCGGTGTGGTGCTCCGCCATGTTCTGGAGGATTTGGTTAGGAAAGCACTTCCCACCGCCACGCACCCCTCTTTCCACCAACCCGCTCCCTCCTCGGCGCCAATATTTCTGCGCAACCAGGCCTTCGCTCCAACTGCAGGTATTTGACGTTGTGTTTTAACAATTTCGATTTATTTGCAGCAGATTCCGCGTCTGAGTGGCATGCTAACCGGCTTGTACCATTCGGCACACGAGATCCACTGGTAGGAGGGGGTGAACAGGGCGGTTCTGTTCCATACACAGCAGGAAGAATCTCTCAGCCTCTCATAGCGAGACAGGTAGAACAAGGCGGGTCACACGCGCGACTCTTTCAGCCAATCCGCTGCAAGCAAACCACTGACAGAAGCCAATGAGATCACGCACAGTCTGGGACGTTGACAAACACAAACGGAAAAACGTTGACAGGAGGTTAGCCAATCCTGTCCCTGGTTTTTAATAACGAACACTCGTTTGAGCCAATCAGCACGAATAACCGTCGCGGCGCTGTGCCGCGATACACCAATGAAATAAA

Function

GO: NA

KEGG:

id description
K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_01088942_01089316.mRNA True 788 mRNA 0.55 1 1088552 1089339

Neighbor

gene id symbol gene type direction distance location
CI01000016_00843272_00857193 NA coding downstream 231256 843150 ~ 857296 (-)
CI01000016_00775184_00778097 HINT3 coding downstream 310455 774658 ~ 778097 (-)
CI01000016_00754785_00770356 NA coding downstream 318196 754683 ~ 770356 (-)
CI01000016_00679328_00729780 NA coding downstream 358586 678792 ~ 729966 (-)
CI01000016_00601605_00607255 RSPO3 coding downstream 481297 600622 ~ 607255 (-)
CI01000016_01134396_01182271 OSBPL10 coding upstream 44475 1133814 ~ 1182271 (-)
CI01000016_01195747_01197970 KIAA1143 coding upstream 106378 1195717 ~ 1199062 (-)
CI01000016_01199558_01199730 TMEM42 coding upstream 110206 1199545 ~ 1199730 (-)
CI01000016_01202843_01213613 ZDHHC3B, ZDHHC3, ZDHHC3A, MGC82349 coding upstream 111919 1201258 ~ 1213613 (-)
CI01000016_01224759_01234682 NA coding upstream 134797 1224136 ~ 1234682 (-)
G94253 NA non-coding downstream 28498 1059288 ~ 1060054 (-)
G94238 NA non-coding downstream 31511 1056355 ~ 1057041 (-)
G94247 NA non-coding downstream 44755 1043578 ~ 1043797 (-)
G94084 NA non-coding downstream 79399 1000424 ~ 1009153 (-)
G94098 NA non-coding downstream 103682 983567 ~ 984870 (-)
G94256 NA non-coding upstream 35703 1125042 ~ 1131942 (-)
G94310 NA non-coding upstream 156007 1245346 ~ 1245597 (-)
G94316 NA non-coding upstream 174168 1263507 ~ 1263749 (-)
G94351 NA non-coding upstream 245743 1335082 ~ 1335664 (-)
G94394 NA non-coding upstream 362836 1452175 ~ 1452402 (-)
G94786 NA other upstream 1181497 2270836 ~ 2276275 (-)
G95070 NA other upstream 1895921 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 2546268 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 2776422 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 3823369 4918975 ~ 4922518 (-)

Expression


Co-expression Network